Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:52:39 (1663168): wrapper (7.7.26015): starting
20:52:39 (1663168): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 20:52:39] Arguments: --nthreads 10
[2025-07-27 20:52:39] Threads: 10
[2025-07-27 20:52:39] Checking for CVMFS
[2025-07-27 20:52:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:52:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:52:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:52:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:52:39] 2.13.1.0 129353 7443 119332 148829 0 65 14119388 39288832 3648 16776704 0 9457083 99.726 4309457 40843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:52:39] CVMFS is ok
[2025-07-27 20:52:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:52:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:52:39] Further information can be found at the LHC@home message board.
[2025-07-27 20:52:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:52:39] Checking for apptainer binary...
[2025-07-27 20:52:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:52:39] Running /usr/bin/apptainer --version
[2025-07-27 20:52:39] apptainer version 1.4.1-1.el9
[2025-07-27 20:52:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:52:39] c-210-13.aglt2.org
[2025-07-27 20:52:39] apptainer works
[2025-07-27 20:52:39] Set ATHENA_PROC_NUMBER=10
[2025-07-27 20:52:39] Set ATHENA_CORE_NUMBER=10
[2025-07-27 20:52:39] Starting ATLAS job with PandaID=6747626576
[2025-07-27 20:52:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:40:30]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:40:30] 2025-07-28 02:39:53,422 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:40:30] 2025-07-28 02:39:55,759 | INFO     | monitor loop #482: job 0:6747626576 is in state 'finished'
[2025-07-27 22:40:30] 2025-07-28 02:39:55,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:40:30] 2025-07-28 02:39:57,794 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:40:30] 2025-07-28 02:39:57,799 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8846999999996
[2025-07-27 22:40:30] 2025-07-28 02:39:57,806 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747626576/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:40:30] 2025-07-28 02:39:57,806 | INFO     | extracted standard info from prmon json
[2025-07-27 22:40:30] 2025-07-28 02:39:57,807 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:40:30] 2025-07-28 02:39:57,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:40:30] 2025-07-28 02:39:57,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:40:30] 2025-07-28 02:39:57,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:40:30] 2025-07-28 02:39:57,810 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:40:30] 2025-07-28 02:39:57,810 | INFO     | sum of square deviations: 358927660.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,811 | INFO     | sum of deviations: -2338101817.999999
[2025-07-27 22:40:30] 2025-07-28 02:39:57,811 | INFO     | mean x: 1753667171.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,811 | INFO     | mean y: 2685663.1904761903
[2025-07-27 22:40:30] 2025-07-28 02:39:57,811 | INFO     | -- intersect: 11426303449.242449
[2025-07-27 22:40:30] 2025-07-28 02:39:57,811 | INFO     | intersect: 11426303449.242449
[2025-07-27 22:40:30] 2025-07-28 02:39:57,811 | INFO     | chi2: 1.5498815961374608
[2025-07-27 22:40:30] 2025-07-28 02:39:57,811 | INFO     | sum of square deviations: 310052325.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,812 | INFO     | sum of deviations: -1974619226.9999995
[2025-07-27 22:40:30] 2025-07-28 02:39:57,812 | INFO     | mean x: 1753667018.5
[2025-07-27 22:40:30] 2025-07-28 02:39:57,812 | INFO     | mean y: 2686800.8
[2025-07-27 22:40:30] 2025-07-28 02:39:57,812 | INFO     | -- intersect: 11171203639.000984
[2025-07-27 22:40:30] 2025-07-28 02:39:57,812 | INFO     | intersect: 11171203639.000984
[2025-07-27 22:40:30] 2025-07-28 02:39:57,812 | INFO     | chi2: 1.5501767500777284
[2025-07-27 22:40:30] 2025-07-28 02:39:57,813 | INFO     | current chi2=1.5501767500777284 (change=-0.01904364443084857 %)
[2025-07-27 22:40:30] 2025-07-28 02:39:57,813 | INFO     | right removable region: 99
[2025-07-27 22:40:30] 2025-07-28 02:39:57,813 | INFO     | sum of square deviations: 310052325.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,813 | INFO     | sum of deviations: -17767054010.500004
[2025-07-27 22:40:30] 2025-07-28 02:39:57,813 | INFO     | mean x: 1753667323.5
[2025-07-27 22:40:30] 2025-07-28 02:39:57,813 | INFO     | mean y: 2732683.61
[2025-07-27 22:40:30] 2025-07-28 02:39:57,813 | INFO     | -- intersect: 100493841895.8163
[2025-07-27 22:40:30] 2025-07-28 02:39:57,814 | INFO     | intersect: 100493841895.8163
[2025-07-27 22:40:30] 2025-07-28 02:39:57,814 | INFO     | chi2: 0.16117612970200984
[2025-07-27 22:40:30] 2025-07-28 02:39:57,814 | INFO     | current chi2=0.16117612970200984 (change=89.60074562446027 %)
[2025-07-27 22:40:30] 2025-07-28 02:39:57,814 | INFO     | sum of square deviations: 265828240.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | sum of deviations: -13670378343.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | mean x: 1753667476.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | mean y: 2718509.484210526
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | -- intersect: 90186131245.21866
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | intersect: 90186131245.21866
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | chi2: 0.15322123327806167
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | current chi2=0.15322123327806167 (change=4.935530117676585 %)
[2025-07-27 22:40:30] 2025-07-28 02:39:57,815 | INFO     | left removable region: 20
[2025-07-27 22:40:30] 2025-07-28 02:39:57,816 | INFO     | sum of square deviations: 152858680.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,816 | INFO     | sum of deviations: -3693820413.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,816 | INFO     | mean x: 1753667598.0
[2025-07-27 22:40:30] 2025-07-28 02:39:57,816 | INFO     | mean y: 2680258.3670886075
[2025-07-27 22:40:30] 2025-07-28 02:39:57,816 | INFO     | -- intersect: 42379947752.16644
[2025-07-27 22:40:30] 2025-07-28 02:39:57,816 | INFO     | intersect: 42379947752.16644
[2025-07-27 22:40:30] 2025-07-28 02:39:57,817 | INFO     | chi2: 0.07429185812228116
[2025-07-27 22:40:30] 2025-07-28 02:39:57,817 | INFO     | -- intersect: 42379947752.16644
[2025-07-27 22:40:30] 2025-07-28 02:39:57,817 | INFO     | current memory leak: -24.16 B/s (using 79 data points, chi2=0.07)
[2025-07-27 22:40:30] 2025-07-28 02:39:57,817 | INFO     | could have reported an average CPU frequency of 2599 MHz (7 samples)
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | ..............................
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . Timing measurements:
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . get job = 0 s
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . initial setup = 2 s
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . payload setup = 7 s
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . stage-in = 0 s
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . payload execution = 6394 s
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . stage-out = 0 s
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | . log creation = 0 s
[2025-07-27 22:40:30] 2025-07-28 02:39:57,818 | INFO     | ..............................
[2025-07-27 22:40:30] 2025-07-28 02:39:58,302 | INFO     | 
[2025-07-27 22:40:30] 2025-07-28 02:39:58,302 | INFO     | job summary report
[2025-07-27 22:40:30] 2025-07-28 02:39:58,302 | INFO     | --------------------------------------------------
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | PanDA job id: 6747626576
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | task id: 45743349
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | errors: (none)
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | pilot state: finished 
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | transexitcode: 0
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | exeerrorcode: 0
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | exeerrordiag: 
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | exitcode: 0
[2025-07-27 22:40:30] 2025-07-28 02:39:58,303 | INFO     | exitmsg: OK
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | cpuconsumptiontime: 59730 s
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | nevents: 400
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | neventsw: 0
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | pid: 1673418
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | pgrp: 1673418
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | corecount: 10
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | event service: False
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | sizes: {0: 2397304, 1: 2397503, 5: 2397765, 11: 2397821, 6405: 2424784, 6406: 2433966, 6411: 2434104}
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | --------------------------------------------------
[2025-07-27 22:40:30] 2025-07-28 02:39:58,304 | INFO     | 
[2025-07-27 22:40:30] 2025-07-28 02:39:58,305 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:40:30] 2025-07-28 02:39:58,325 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,325 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,325 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | job 6747626576 has completed (purged errors)
[2025-07-27 22:40:30] 2025-07-28 02:39:58,327 | INFO     | overall cleanup function is called
[2025-07-27 22:40:30] 2025-07-28 02:39:59,335 | INFO     | --- collectZombieJob: --- 10, [1673418]
[2025-07-27 22:40:30] 2025-07-28 02:39:59,335 | INFO     | zombie collector waiting for pid 1673418
[2025-07-27 22:40:30] 2025-07-28 02:39:59,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:40:30] 2025-07-28 02:39:59,336 | INFO     | collected zombie processes
[2025-07-27 22:40:30] 2025-07-28 02:39:59,336 | INFO     | will attempt to kill all subprocesses of pid=1673418
[2025-07-27 22:40:30] 2025-07-28 02:39:59,522 | INFO     | process IDs to be killed: [1673418] (in reverse order)
[2025-07-27 22:40:30] 2025-07-28 02:39:59,583 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:40:30] 2025-07-28 02:39:59,584 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:40:30] 2025-07-28 02:39:59,590 | INFO     | did not find any defunct processes belonging to 1673418
[2025-07-27 22:40:30] 2025-07-28 02:39:59,597 | INFO     | did not find any defunct processes belonging to 1673418
[2025-07-27 22:40:30] 2025-07-28 02:39:59,597 | INFO     | ready for new job
[2025-07-27 22:40:30] 2025-07-28 02:39:59,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:40:30] 2025-07-28 02:39:59,599 | INFO     | ***************************************
[2025-07-27 22:40:30] 2025-07-28 02:39:59,599 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:40:30] 2025-07-28 02:39:59,599 | INFO     | ***************************************
[2025-07-27 22:40:30] 2025-07-28 02:39:59,599 | INFO     | 
[2025-07-27 22:40:30] 2025-07-28 02:39:59,601 | INFO     | architecture information:
[2025-07-27 22:40:30] 2025-07-28 02:39:59,601 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:40:30] 2025-07-28 02:39:59,615 | INFO     | cat /etc/os-release:
[2025-07-27 22:40:30] NAME="CentOS Linux"
[2025-07-27 22:40:30] VERSION="7 (Core)"
[2025-07-27 22:40:30] ID="centos"
[2025-07-27 22:40:30] ID_LIKE="rhel fedora"
[2025-07-27 22:40:30] VERSION_ID="7"
[2025-07-27 22:40:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:40:30] ANSI_COLOR="0;31"
[2025-07-27 22:40:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:40:30] HOME_URL="https://www.centos.org/"
[2025-07-27 22:40:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:40:30] 
[2025-07-27 22:40:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:40:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:40:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:40:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:40:30] 
[2025-07-27 22:40:30] 2025-07-28 02:39:59,615 | INFO     | ***************************************
[2025-07-27 22:40:30] 2025-07-28 02:40:00,117 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:40:30] 2025-07-28 02:40:00,136 | INFO     | sufficient remaining disk space (53984886784 B)
[2025-07-27 22:40:30] 2025-07-28 02:40:00,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:40:30] 2025-07-28 02:40:00,137 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:40:30] 2025-07-28 02:40:00,137 | INFO     | update_server=False
[2025-07-27 22:40:30] 2025-07-28 02:40:00,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:40:30] 2025-07-28 02:40:00,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:40:30] 2025-07-28 02:40:00,137 | INFO     | aborting loop
[2025-07-27 22:40:30] 2025-07-28 02:40:00,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:40:30] 2025-07-28 02:40:00,262 | INFO     | all job control threads have been joined
[2025-07-27 22:40:30] 2025-07-28 02:40:00,853 | INFO     | all data control threads have been joined
[2025-07-27 22:40:30] 2025-07-28 02:40:00,958 | INFO     | all payload control threads have been joined
[2025-07-27 22:40:30] 2025-07-28 02:40:01,142 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,143 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,240 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,267 | INFO     | [job] control thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:40:30] 2025-07-28 02:40:01,295 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,321 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,507 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,858 | INFO     | [data] control thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:01,963 | INFO     | [payload] control thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:02,119 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:02,450 | INFO     | [job] validate thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:02,635 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:02,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:40:30] 2025-07-28 02:40:03,290 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:03,925 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:04,143 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:10,668 | INFO     | job.realtimelogging is not enabled
[2025-07-27 22:40:30] 2025-07-28 02:40:11,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:40:30] 2025-07-28 02:40:12,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784146818880)>', '<ExcThread(monitor, started 139783510673152)>']
[2025-07-27 22:40:30] 2025-07-28 02:40:17,646 | INFO     | all workflow threads have been joined
[2025-07-27 22:40:30] 2025-07-28 02:40:17,646 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:40:30] 2025-07-28 02:40:17,646 | INFO     | traces error code: 0
[2025-07-27 22:40:30] 2025-07-28 02:40:17,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:40:30] 2025-07-28 02:40:29,926 | INFO     | PID=1666810 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:40:30] 2025-07-28 02:40:29,927 | INFO     | .. there are 6 such processes running
[2025-07-27 22:40:30] 2025-07-28 02:40:29,927 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:40:30] 2025-07-28 02:40:29,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:40:30] 2025-07-28 02:40:29,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:40:30] 2025-07-28 02:40:29,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:40:30] 2025-07-28 02:40:29,927 | INFO     | [monitor] control thread has ended
[2025-07-27 22:40:30] 2025-07-28 02:40:30,093 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:40:30] 2025-07-28 02:40:30,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:40:30] 2025-07-28 02:40:30,101 [wrapper] pilotpid: 1666810
[2025-07-27 22:40:30] 2025-07-28 02:40:30,103 [wrapper] Pilot exit status: 0
[2025-07-27 22:40:30] 2025-07-28 02:40:30,115 [wrapper] pandaids: 6747626576
[2025-07-27 22:40:30] 2025-07-28 02:40:30,157 [wrapper] cleanup supervisor_pilot 1765326 1666811
[2025-07-27 22:40:30] 2025-07-28 02:40:30,162 [wrapper] Test setup, not cleaning
[2025-07-27 22:40:30] 2025-07-28 02:40:30,165 [wrapper] apfmon messages muted
[2025-07-27 22:40:30] 2025-07-28 02:40:30,169 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:40:30] 2025-07-28 02:40:30,173 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:40:30]  *** Error codes and diagnostics ***
[2025-07-27 22:40:30]     "exeErrorCode": 0,
[2025-07-27 22:40:30]     "exeErrorDiag": "",
[2025-07-27 22:40:30]     "pilotErrorCode": 0,
[2025-07-27 22:40:30]     "pilotErrorDiag": "",
[2025-07-27 22:40:30]  *** Listing of results directory ***
[2025-07-27 22:40:30] total 363396
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-27 22:40:30] -rwx------. 1 boincer umatlas     36292 Jul 27 15:29 runpilot2-wrapper.sh
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:29 queuedata.json
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:40:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:52 run_atlas
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:52 job.xml
[2025-07-27 22:40:30] -rw-r--r--. 2 boincer umatlas 146158434 Jul 27 20:52 EVNT.45743347._002962.pool.root.1
[2025-07-27 22:40:30] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:52 start_atlas.sh
[2025-07-27 22:40:30] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:52 shared
[2025-07-27 22:40:30] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 20:52 input.tar.gz
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:52 boinc_lockfile
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 20:52 pandaJob.out
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas    980125 Jul 27 20:52 agis_schedconf.cvmfs.json
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:52 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:40:30] drwx------. 4 boincer umatlas      4096 Jul 27 20:52 pilot3
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas 220134790 Jul 27 22:39 HITS.45743349._054637.pool.root.1
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas      6658 Jul 27 22:39 init_data.xml
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas       529 Jul 27 22:39 boinc_task_state.xml
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas        95 Jul 27 22:39 pilot_heartbeat.json
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas      1028 Jul 27 22:39 memory_monitor_summary.json
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas    348547 Jul 27 22:39 log.45743349._054637.job.log.tgz.1
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas      7809 Jul 27 22:39 heartbeat.json
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:39 boinc_mmap_file
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:39 wrapper_checkpoint.txt
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas       822 Jul 27 22:40 pilotlog.txt
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas    624325 Jul 27 22:40 log.45743349._054637.job.log.1
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas       357 Jul 27 22:40 output.list
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:40 runtime_log
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas    993280 Jul 27 22:40 result.tar.gz
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas       653 Jul 27 22:40 XENMDmtEM07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8EWLDmC6756n.diag
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 22:40 runtime_log.err
[2025-07-27 22:40:30] -rw-r--r--. 1 boincer umatlas     21208 Jul 27 22:40 stderr.txt
[2025-07-27 22:40:30] HITS file was successfully produced:
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas 220134790 Jul 27 22:39 shared/HITS.pool.root.1
[2025-07-27 22:40:30]  *** Contents of shared directory: ***
[2025-07-27 22:40:30] total 359236
[2025-07-27 22:40:30] -rw-r--r--. 2 boincer umatlas 146158434 Jul 27 20:52 ATLAS.root_0
[2025-07-27 22:40:30] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:52 start_atlas.sh
[2025-07-27 22:40:30] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 20:52 input.tar.gz
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas 220134790 Jul 27 22:39 HITS.pool.root.1
[2025-07-27 22:40:30] -rw-------. 1 boincer umatlas    993280 Jul 27 22:40 result.tar.gz
22:40:31 (1663168): run_atlas exited; CPU time 59792.164180
22:40:31 (1663168): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN