Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:55:15 (829577): wrapper (7.7.26015): starting
20:55:15 (829577): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 20:55:15] Arguments: --nthreads 10
[2025-07-27 20:55:15] Threads: 10
[2025-07-27 20:55:15] Checking for CVMFS
[2025-07-27 20:55:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:55:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:55:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:55:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:55:16] 2.13.1.0 128665 7156 174076 148829 1 145 26087492 39288833 4669 16776704 0 7633526 99.719 7844742 34784 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:55:16] CVMFS is ok
[2025-07-27 20:55:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:55:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:55:16] Further information can be found at the LHC@home message board.
[2025-07-27 20:55:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:55:16] Checking for apptainer binary...
[2025-07-27 20:55:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:55:16] Running /usr/bin/apptainer --version
[2025-07-27 20:55:16] apptainer version 1.4.1-1.el9
[2025-07-27 20:55:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:55:16] c-210-2.aglt2.org
[2025-07-27 20:55:16] apptainer works
[2025-07-27 20:55:16] Set ATHENA_PROC_NUMBER=10
[2025-07-27 20:55:16] Set ATHENA_CORE_NUMBER=10
[2025-07-27 20:55:16] Starting ATLAS job with PandaID=6747626422
[2025-07-27 20:55:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:41:47]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:41:47] 2025-07-28 02:41:13,857 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:41:47] 2025-07-28 02:41:13,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:41:47] 2025-07-28 02:41:13,860 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:41:47] 2025-07-28 02:41:13,861 | INFO     | sum of square deviations: 348769330.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,861 | INFO     | sum of deviations: -8230857581.499998
[2025-07-27 22:41:47] 2025-07-28 02:41:13,862 | INFO     | mean x: 1753667300.5
[2025-07-27 22:41:47] 2025-07-28 02:41:13,862 | INFO     | mean y: 2657222.2596153845
[2025-07-27 22:41:47] 2025-07-28 02:41:13,862 | INFO     | -- intersect: 41388709704.99673
[2025-07-27 22:41:47] 2025-07-28 02:41:13,862 | INFO     | intersect: 41388709704.99673
[2025-07-27 22:41:47] 2025-07-28 02:41:13,862 | INFO     | chi2: 2.2474462787252065
[2025-07-27 22:41:47] 2025-07-28 02:41:13,863 | INFO     | sum of square deviations: 300842850.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,863 | INFO     | sum of deviations: -839179928.0000004
[2025-07-27 22:41:47] 2025-07-28 02:41:13,863 | INFO     | mean x: 1753667148.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,863 | INFO     | mean y: 2679898.727272727
[2025-07-27 22:41:47] 2025-07-28 02:41:13,863 | INFO     | -- intersect: 4894410817.360061
[2025-07-27 22:41:47] 2025-07-28 02:41:13,864 | INFO     | intersect: 4894410817.360061
[2025-07-27 22:41:47] 2025-07-28 02:41:13,864 | INFO     | chi2: 1.5742396555139442
[2025-07-27 22:41:47] 2025-07-28 02:41:13,864 | INFO     | current chi2=1.5742396555139442 (change=29.954292104063896 %)
[2025-07-27 22:41:47] 2025-07-28 02:41:13,864 | INFO     | sum of square deviations: 257521107.5
[2025-07-27 22:41:47] 2025-07-28 02:41:13,865 | INFO     | sum of deviations: -415218368.5000006
[2025-07-27 22:41:47] 2025-07-28 02:41:13,865 | INFO     | mean x: 1753666995.5
[2025-07-27 22:41:47] 2025-07-28 02:41:13,865 | INFO     | mean y: 2681392.563829787
[2025-07-27 22:41:47] 2025-07-28 02:41:13,865 | INFO     | -- intersect: 2830235047.6125054
[2025-07-27 22:41:47] 2025-07-28 02:41:13,865 | INFO     | intersect: 2830235047.6125054
[2025-07-27 22:41:47] 2025-07-28 02:41:13,865 | INFO     | chi2: 1.5762583298836472
[2025-07-27 22:41:47] 2025-07-28 02:41:13,866 | INFO     | current chi2=1.5762583298836472 (change=-0.128231706184787 %)
[2025-07-27 22:41:47] 2025-07-28 02:41:13,866 | INFO     | right removable region: 93
[2025-07-27 22:41:47] 2025-07-28 02:41:13,866 | INFO     | sum of square deviations: 300842850.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,867 | INFO     | sum of deviations: -23276223413.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,867 | INFO     | mean x: 1753667453.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,867 | INFO     | mean y: 2703945.0505050505
[2025-07-27 22:41:47] 2025-07-28 02:41:13,867 | INFO     | -- intersect: 135684025366.29976
[2025-07-27 22:41:47] 2025-07-28 02:41:13,867 | INFO     | intersect: 135684025366.29976
[2025-07-27 22:41:47] 2025-07-28 02:41:13,867 | INFO     | chi2: 0.8752078249575853
[2025-07-27 22:41:47] 2025-07-28 02:41:13,867 | INFO     | current chi2=0.8752078249575853 (change=61.057675405081554 %)
[2025-07-27 22:41:47] 2025-07-28 02:41:13,868 | INFO     | sum of square deviations: 257521107.5
[2025-07-27 22:41:47] 2025-07-28 02:41:13,868 | INFO     | sum of deviations: -20238090353.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,868 | INFO     | mean x: 1753667605.5
[2025-07-27 22:41:47] 2025-07-28 02:41:13,868 | INFO     | mean y: 2693055.14893617
[2025-07-27 22:41:47] 2025-07-28 02:41:13,869 | INFO     | -- intersect: 137820069633.64224
[2025-07-27 22:41:47] 2025-07-28 02:41:13,869 | INFO     | intersect: 137820069633.64224
[2025-07-27 22:41:47] 2025-07-28 02:41:13,869 | INFO     | chi2: 0.8612955794300575
[2025-07-27 22:41:47] 2025-07-28 02:41:13,869 | INFO     | current chi2=0.8612955794300575 (change=1.5895933663758102 %)
[2025-07-27 22:41:47] 2025-07-28 02:41:13,869 | INFO     | left removable region: 20
[2025-07-27 22:41:47] 2025-07-28 02:41:13,869 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,870 | INFO     | sum of deviations: -3948358650.9999995
[2025-07-27 22:41:47] 2025-07-28 02:41:13,870 | INFO     | mean x: 1753667575.0
[2025-07-27 22:41:47] 2025-07-28 02:41:13,870 | INFO     | mean y: 2682138.2602739725
[2025-07-27 22:41:47] 2025-07-28 02:41:13,870 | INFO     | -- intersect: 57414112471.45593
[2025-07-27 22:41:47] 2025-07-28 02:41:13,870 | INFO     | intersect: 57414112471.45593
[2025-07-27 22:41:47] 2025-07-28 02:41:13,870 | INFO     | chi2: 0.08288506645357872
[2025-07-27 22:41:47] 2025-07-28 02:41:13,871 | INFO     | -- intersect: 57414112471.45593
[2025-07-27 22:41:47] 2025-07-28 02:41:13,871 | INFO     | current memory leak: -32.74 B/s (using 73 data points, chi2=0.08)
[2025-07-27 22:41:47] 2025-07-28 02:41:13,871 | INFO     | could have reported an average CPU frequency of 2602 MHz (7 samples)
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | ..............................
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | . Timing measurements:
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | . get job = 0 s
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | . initial setup = 2 s
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | . payload setup = 8 s
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | . stage-in = 0 s
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | . payload execution = 6308 s
[2025-07-27 22:41:47] 2025-07-28 02:41:13,872 | INFO     | . stage-out = 0 s
[2025-07-27 22:41:47] 2025-07-28 02:41:13,873 | INFO     | . log creation = 0 s
[2025-07-27 22:41:47] 2025-07-28 02:41:13,873 | INFO     | ..............................
[2025-07-27 22:41:47] 2025-07-28 02:41:14,460 | INFO     | 
[2025-07-27 22:41:47] 2025-07-28 02:41:14,460 | INFO     | job summary report
[2025-07-27 22:41:47] 2025-07-28 02:41:14,460 | INFO     | --------------------------------------------------
[2025-07-27 22:41:47] 2025-07-28 02:41:14,460 | INFO     | PanDA job id: 6747626422
[2025-07-27 22:41:47] 2025-07-28 02:41:14,460 | INFO     | task id: 45743349
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | errors: (none)
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | pilot state: finished 
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | transexitcode: 0
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | exeerrorcode: 0
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | exeerrordiag: 
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | exitcode: 0
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | exitmsg: OK
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | cpuconsumptiontime: 57758 s
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | nevents: 400
[2025-07-27 22:41:47] 2025-07-28 02:41:14,461 | INFO     | neventsw: 0
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | pid: 839586
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | pgrp: 839586
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | corecount: 10
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | event service: False
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | sizes: {0: 2397302, 1: 2397501, 6: 2397763, 12: 2397791, 6320: 2424703, 6322: 2433885, 6329: 2434023}
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | --------------------------------------------------
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | 
[2025-07-27 22:41:47] 2025-07-28 02:41:14,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:41:47] 2025-07-28 02:41:14,485 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:41:47] 2025-07-28 02:41:14,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:41:47] 2025-07-28 02:41:14,488 | INFO     | job 6747626422 has completed (purged errors)
[2025-07-27 22:41:47] 2025-07-28 02:41:14,488 | INFO     | overall cleanup function is called
[2025-07-27 22:41:47] 2025-07-28 02:41:15,150 | INFO     | PID=833169 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:41:47] 2025-07-28 02:41:15,150 | INFO     | .. there are 6 such processes running
[2025-07-27 22:41:47] 2025-07-28 02:41:15,497 | INFO     | --- collectZombieJob: --- 10, [839586]
[2025-07-27 22:41:47] 2025-07-28 02:41:15,497 | INFO     | zombie collector waiting for pid 839586
[2025-07-27 22:41:47] 2025-07-28 02:41:15,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:41:47] 2025-07-28 02:41:15,497 | INFO     | collected zombie processes
[2025-07-27 22:41:47] 2025-07-28 02:41:15,497 | INFO     | will attempt to kill all subprocesses of pid=839586
[2025-07-27 22:41:47] 2025-07-28 02:41:15,702 | INFO     | process IDs to be killed: [839586] (in reverse order)
[2025-07-27 22:41:47] 2025-07-28 02:41:15,771 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:41:47] 2025-07-28 02:41:15,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:41:47] 2025-07-28 02:41:15,778 | INFO     | did not find any defunct processes belonging to 839586
[2025-07-27 22:41:47] 2025-07-28 02:41:15,786 | INFO     | did not find any defunct processes belonging to 839586
[2025-07-27 22:41:47] 2025-07-28 02:41:15,786 | INFO     | ready for new job
[2025-07-27 22:41:47] 2025-07-28 02:41:15,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:41:47] 2025-07-28 02:41:15,788 | INFO     | ***************************************
[2025-07-27 22:41:47] 2025-07-28 02:41:15,789 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:41:47] 2025-07-28 02:41:15,789 | INFO     | ***************************************
[2025-07-27 22:41:47] 2025-07-28 02:41:15,789 | INFO     | 
[2025-07-27 22:41:47] 2025-07-28 02:41:15,791 | INFO     | architecture information:
[2025-07-27 22:41:47] 2025-07-28 02:41:15,791 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:41:47] 2025-07-28 02:41:15,808 | INFO     | cat /etc/os-release:
[2025-07-27 22:41:47] NAME="CentOS Linux"
[2025-07-27 22:41:47] VERSION="7 (Core)"
[2025-07-27 22:41:47] ID="centos"
[2025-07-27 22:41:47] ID_LIKE="rhel fedora"
[2025-07-27 22:41:47] VERSION_ID="7"
[2025-07-27 22:41:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:41:47] ANSI_COLOR="0;31"
[2025-07-27 22:41:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:41:47] HOME_URL="https://www.centos.org/"
[2025-07-27 22:41:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:41:47] 
[2025-07-27 22:41:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:41:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:41:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:41:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:41:47] 
[2025-07-27 22:41:47] 2025-07-28 02:41:15,809 | INFO     | ***************************************
[2025-07-27 22:41:47] 2025-07-28 02:41:16,311 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:41:47] 2025-07-28 02:41:16,330 | INFO     | sufficient remaining disk space (53995372544 B)
[2025-07-27 22:41:47] 2025-07-28 02:41:16,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:41:47] 2025-07-28 02:41:16,331 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:41:47] 2025-07-28 02:41:16,331 | INFO     | update_server=False
[2025-07-27 22:41:47] 2025-07-28 02:41:16,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:41:47] 2025-07-28 02:41:16,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:41:47] 2025-07-28 02:41:16,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:41:47] 2025-07-28 02:41:16,482 | INFO     | aborting loop
[2025-07-27 22:41:47] 2025-07-28 02:41:16,488 | INFO     | all payload control threads have been joined
[2025-07-27 22:41:47] 2025-07-28 02:41:16,532 | INFO     | all job control threads have been joined
[2025-07-27 22:41:47] 2025-07-28 02:41:17,289 | INFO     | all data control threads have been joined
[2025-07-27 22:41:47] 2025-07-28 02:41:17,336 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,487 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,494 | INFO     | [payload] control thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,537 | INFO     | [job] control thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,634 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,667 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,922 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:17,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:41:47] 2025-07-28 02:41:17,948 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:18,201 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:18,253 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:18,294 | INFO     | [data] control thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:18,337 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:18,748 | INFO     | [job] validate thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:18,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:41:47] 2025-07-28 02:41:20,000 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:21,951 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:41:47] 2025-07-28 02:41:23,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729332193088)>', '<ExcThread(monitor, started 139728691123968)>']
[2025-07-27 22:41:47] 2025-07-28 02:41:28,481 | INFO     | all workflow threads have been joined
[2025-07-27 22:41:47] 2025-07-28 02:41:28,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:41:47] 2025-07-28 02:41:28,481 | INFO     | traces error code: 0
[2025-07-27 22:41:47] 2025-07-28 02:41:28,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:41:47] 2025-07-28 02:41:47,559 | INFO     | PID=833169 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 22:41:47] 2025-07-28 02:41:47,560 | INFO     | .. there are 6 such processes running
[2025-07-27 22:41:47] 2025-07-28 02:41:47,561 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:41:47] 2025-07-28 02:41:47,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:41:47] 2025-07-28 02:41:47,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:41:47] 2025-07-28 02:41:47,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:41:47] 2025-07-28 02:41:47,562 | INFO     | [monitor] control thread has ended
[2025-07-27 22:41:47] 2025-07-28 02:41:47,782 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:41:47] 2025-07-28 02:41:47,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:41:47] 2025-07-28 02:41:47,791 [wrapper] pilotpid: 833169
[2025-07-27 22:41:47] 2025-07-28 02:41:47,796 [wrapper] Pilot exit status: 0
[2025-07-27 22:41:47] 2025-07-28 02:41:47,813 [wrapper] pandaids: 6747626422
[2025-07-27 22:41:47] 2025-07-28 02:41:47,867 [wrapper] cleanup supervisor_pilot  957378 833170
[2025-07-27 22:41:47] 2025-07-28 02:41:47,871 [wrapper] Test setup, not cleaning
[2025-07-27 22:41:47] 2025-07-28 02:41:47,876 [wrapper] apfmon messages muted
[2025-07-27 22:41:47] 2025-07-28 02:41:47,880 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:41:47] 2025-07-28 02:41:47,885 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:41:47]  *** Error codes and diagnostics ***
[2025-07-27 22:41:47]     "exeErrorCode": 0,
[2025-07-27 22:41:47]     "exeErrorDiag": "",
[2025-07-27 22:41:47]     "pilotErrorCode": 0,
[2025-07-27 22:41:47]     "pilotErrorDiag": "",
[2025-07-27 22:41:47]  *** Listing of results directory ***
[2025-07-27 22:41:47] total 352096
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:20 queuedata.json
[2025-07-27 22:41:47] -rwx------. 1 boincer umatlas     36292 Jul 27 15:22 runpilot2-wrapper.sh
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:41:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:55 run_atlas
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:55 job.xml
[2025-07-27 22:41:47] -rw-r--r--. 2 boincer umatlas 146894191 Jul 27 20:55 EVNT.45743347._002955.pool.root.1
[2025-07-27 22:41:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:55 start_atlas.sh
[2025-07-27 22:41:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:55 shared
[2025-07-27 22:41:47] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 20:55 input.tar.gz
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:55 boinc_lockfile
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 20:55 pandaJob.out
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas    980125 Jul 27 20:55 agis_schedconf.cvmfs.json
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:41:47] drwx------. 4 boincer umatlas      4096 Jul 27 20:55 pilot3
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 22:39 init_data.xml
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas 207874023 Jul 27 22:40 HITS.45743349._054524.pool.root.1
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas       530 Jul 27 22:40 boinc_task_state.xml
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas      1037 Jul 27 22:41 memory_monitor_summary.json
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas    337429 Jul 27 22:41 log.45743349._054524.job.log.tgz.1
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas      7816 Jul 27 22:41 heartbeat.json
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:41 boinc_mmap_file
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:41 wrapper_checkpoint.txt
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas        95 Jul 27 22:41 pilot_heartbeat.json
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas       821 Jul 27 22:41 pilotlog.txt
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas    613017 Jul 27 22:41 log.45743349._054524.job.log.1
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas       357 Jul 27 22:41 output.list
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:41 runtime_log
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas    972800 Jul 27 22:41 result.tar.gz
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas      8657 Jul 27 22:41 runtime_log.err
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas       652 Jul 27 22:41 owQNDm27L07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDWLDmf8Wnjn.diag
[2025-07-27 22:41:47] -rw-r--r--. 1 boincer umatlas     20996 Jul 27 22:41 stderr.txt
[2025-07-27 22:41:47] HITS file was successfully produced:
[2025-07-27 22:41:47] -rw-------. 1 boincer umatlas 207874023 Jul 27 22:40 shared/HITS.pool.root.1
[2025-07-27 22:41:47]  *** Contents of shared directory: ***
[2025-07-27 22:41:48] total 347960
[2025-07-27 22:41:48] -rw-r--r--. 2 boincer umatlas 146894191 Jul 27 20:55 ATLAS.root_0
[2025-07-27 22:41:48] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:55 start_atlas.sh
[2025-07-27 22:41:48] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 20:55 input.tar.gz
[2025-07-27 22:41:48] -rw-------. 1 boincer umatlas 207874023 Jul 27 22:40 HITS.pool.root.1
[2025-07-27 22:41:48] -rw-------. 1 boincer umatlas    972800 Jul 27 22:41 result.tar.gz
22:41:49 (829577): run_atlas exited; CPU time 57830.760884
22:41:49 (829577): called boinc_finish(0)

</stderr_txt>
]]>

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