Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:33:15 (1038663): wrapper (7.7.26015): starting
20:33:15 (1038663): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:33:15] Arguments: --nthreads 8
[2025-07-27 20:33:15] Threads: 8
[2025-07-27 20:33:15] Checking for CVMFS
[2025-07-27 20:33:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:33:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:33:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:33:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:33:16] 2.13.1.0 5065 2722 145256 148829 2 318 26867422 40960000 9475 16776704 0 8365195 99.714 5523497 25706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:33:16] CVMFS is ok
[2025-07-27 20:33:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:33:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:33:16] Further information can be found at the LHC@home message board.
[2025-07-27 20:33:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:33:16] Checking for apptainer binary...
[2025-07-27 20:33:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:33:16] Running /usr/bin/apptainer --version
[2025-07-27 20:33:16] apptainer version 1.4.1-1.el9
[2025-07-27 20:33:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:33:16] c-206-35.aglt2.org
[2025-07-27 20:33:16] apptainer works
[2025-07-27 20:33:16] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:33:16] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:33:16] Starting ATLAS job with PandaID=6747626229
[2025-07-27 20:33:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:02:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:02:22]  replicas=None
[2025-07-27 22:02:22]  scope=mc23_13p6TeV
[2025-07-27 22:02:22]  status=None
[2025-07-27 22:02:22]  status_code=0
[2025-07-27 22:02:22]  storage_token=
[2025-07-27 22:02:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747626229/log.45743349._054331.job.log.tgz.1
[2025-07-27 22:02:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/4d/log.45743349._054331.job.log.tgz.1
[2025-07-27 22:02:22]  workdir=None
[2025-07-27 22:02:22] ]
[2025-07-27 22:02:22] 2025-07-28 02:01:41,351 | INFO     | transferring file log.45743349._054331.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747626229/log.45743349._054331.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 22:02:22] 2025-07-28 02:01:41,351 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747626229/log.45743349._054331.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._054331.job
[2025-07-27 22:02:22] 2025-07-28 02:01:41,373 | INFO     | adding to output.list: log.45743349._054331.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/4d/log.45743349._054331.job.log.tg
[2025-07-27 22:02:22] 2025-07-28 02:01:41,374 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:02:22] 2025-07-28 02:01:41,374 | INFO     | summary of transferred files:
[2025-07-27 22:02:22] 2025-07-28 02:01:41,374 | INFO     |  -- lfn=log.45743349._054331.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:02:22] 2025-07-28 02:01:41,374 | INFO     | stage-out finished correctly
[2025-07-27 22:02:22] 2025-07-28 02:01:41,705 | WARNING  | process 1055192 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 22:02:22] 2025-07-28 02:01:41,705 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747626229/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:02:22] 2025-07-28 02:01:41,978 | INFO     | number of running child processes to parent process 1055192: 1
[2025-07-27 22:02:22] 2025-07-28 02:01:41,978 | INFO     | maximum number of monitored processes: 6
[2025-07-27 22:02:22] 2025-07-28 02:01:44,024 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:02:22] 2025-07-28 02:01:44,380 | INFO     | job 6747626229 has state=finished
[2025-07-27 22:02:22] 2025-07-28 02:01:44,381 | INFO     | preparing for final server update for job 6747626229 in state='finished'
[2025-07-27 22:02:22] 2025-07-28 02:01:44,381 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:02:22] 2025-07-28 02:01:44,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:02:22] 2025-07-28 02:01:44,381 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:02:22] 2025-07-28 02:01:44,381 | INFO     | job 6747626229 has finished - writing final server update
[2025-07-27 22:02:22] 2025-07-28 02:01:44,381 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:02:22] 2025-07-28 02:01:44,382 | INFO     | executing command: lscpu
[2025-07-27 22:02:22] 2025-07-28 02:01:44,437 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:02:22] 2025-07-28 02:01:44,482 | INFO     | monitor loop #384: job 0:6747626229 is in state 'finished'
[2025-07-27 22:02:22] 2025-07-28 02:01:44,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:02:22] 2025-07-28 02:01:45,745 | INFO     | PID=1043100 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 22:02:22] 2025-07-28 02:01:45,745 | INFO     | .. there are 10 such processes running
[2025-07-27 22:02:22] 2025-07-28 02:01:46,987 | INFO     | monitor loop #385: job 0:6747626229 is in state 'finished'
[2025-07-27 22:02:22] 2025-07-28 02:01:46,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:02:22] 2025-07-28 02:01:48,708 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:02:22] 2025-07-28 02:01:48,715 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3265.026609375001
[2025-07-27 22:02:22] 2025-07-28 02:01:48,726 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747626229/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:02:22] 2025-07-28 02:01:48,727 | INFO     | extracted standard info from prmon json
[2025-07-27 22:02:22] 2025-07-28 02:01:48,727 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:02:22] 2025-07-28 02:01:48,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:02:22] 2025-07-28 02:01:48,727 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:02:22] 2025-07-28 02:01:48,727 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:02:22] 2025-07-28 02:01:48,729 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:02:22] 2025-07-28 02:01:48,729 | INFO     | sum of square deviations: 158730787.80000016
[2025-07-27 22:02:22] 2025-07-28 02:01:48,729 | INFO     | sum of deviations: -8592284067.549997
[2025-07-27 22:02:22] 2025-07-28 02:01:48,729 | INFO     | mean x: 1753665543.55
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | mean y: 2637739.0125
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | -- intersect: 94930614336.98447
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | intersect: 94930614336.98447
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | chi2: 0.037806253196874175
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | -- intersect: 94930614336.98447
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | current memory leak: -54.13 B/s (using 80 data points, chi2=0.04)
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | could have reported an average CPU frequency of 3243 MHz (6 samples)
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | ..............................
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | . Timing measurements:
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | . get job = 0 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | . initial setup = 2 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,730 | INFO     | . payload setup = 5 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,731 | INFO     | . stage-in = 0 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,731 | INFO     | . payload execution = 5270 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,731 | INFO     | . stage-out = 0 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,731 | INFO     | . log creation = 0 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,731 | INFO     | ..............................
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | 
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | job summary report
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | --------------------------------------------------
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | PanDA job id: 6747626229
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | task id: 45743349
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | errors: (none)
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | pilot state: finished 
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | transexitcode: 0
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | exeerrorcode: 0
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | exeerrordiag: 
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | exitcode: 0
[2025-07-27 22:02:22] 2025-07-28 02:01:48,803 | INFO     | exitmsg: OK
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | cpuconsumptiontime: 36558 s
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | nevents: 400
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | neventsw: 0
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | pid: 1055192
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | pgrp: 1055192
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | corecount: 8
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | event service: False
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 5280: 2424269, 5282: 2433267, 5285: 2433323, 5290: 2433645}
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | --------------------------------------------------
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | 
[2025-07-27 22:02:22] 2025-07-28 02:01:48,804 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:02:22] 2025-07-28 02:01:48,829 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | job 6747626229 has completed (purged errors)
[2025-07-27 22:02:22] 2025-07-28 02:01:48,831 | INFO     | overall cleanup function is called
[2025-07-27 22:02:22] 2025-07-28 02:01:49,840 | INFO     | --- collectZombieJob: --- 10, [1055192]
[2025-07-27 22:02:22] 2025-07-28 02:01:49,840 | INFO     | zombie collector waiting for pid 1055192
[2025-07-27 22:02:22] 2025-07-28 02:01:49,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:02:22] 2025-07-28 02:01:49,840 | INFO     | collected zombie processes
[2025-07-27 22:02:22] 2025-07-28 02:01:49,840 | INFO     | will attempt to kill all subprocesses of pid=1055192
[2025-07-27 22:02:22] 2025-07-28 02:01:50,090 | INFO     | process IDs to be killed: [1055192] (in reverse order)
[2025-07-27 22:02:22] 2025-07-28 02:01:50,182 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:02:22] 2025-07-28 02:01:50,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:02:22] 2025-07-28 02:01:50,195 | INFO     | did not find any defunct processes belonging to 1055192
[2025-07-27 22:02:22] 2025-07-28 02:01:50,205 | INFO     | did not find any defunct processes belonging to 1055192
[2025-07-27 22:02:22] 2025-07-28 02:01:50,205 | INFO     | ready for new job
[2025-07-27 22:02:22] 2025-07-28 02:01:50,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:02:22] 2025-07-28 02:01:50,207 | INFO     | ***************************************
[2025-07-27 22:02:22] 2025-07-28 02:01:50,207 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:02:22] 2025-07-28 02:01:50,207 | INFO     | ***************************************
[2025-07-27 22:02:22] 2025-07-28 02:01:50,207 | INFO     | 
[2025-07-27 22:02:22] 2025-07-28 02:01:50,210 | INFO     | architecture information:
[2025-07-27 22:02:22] 2025-07-28 02:01:50,210 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:02:22] 2025-07-28 02:01:50,227 | INFO     | cat /etc/os-release:
[2025-07-27 22:02:22] NAME="CentOS Linux"
[2025-07-27 22:02:22] VERSION="7 (Core)"
[2025-07-27 22:02:22] ID="centos"
[2025-07-27 22:02:22] ID_LIKE="rhel fedora"
[2025-07-27 22:02:22] VERSION_ID="7"
[2025-07-27 22:02:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:02:22] ANSI_COLOR="0;31"
[2025-07-27 22:02:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:02:22] HOME_URL="https://www.centos.org/"
[2025-07-27 22:02:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:02:22] 
[2025-07-27 22:02:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:02:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:02:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:02:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:02:22] 
[2025-07-27 22:02:22] 2025-07-28 02:01:50,228 | INFO     | ***************************************
[2025-07-27 22:02:22] 2025-07-28 02:01:50,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:02:22] 2025-07-28 02:01:50,769 | INFO     | sufficient remaining disk space (85954920448 B)
[2025-07-27 22:02:22] 2025-07-28 02:01:50,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:02:22] 2025-07-28 02:01:50,770 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:02:22] 2025-07-28 02:01:50,770 | INFO     | update_server=False
[2025-07-27 22:02:22] 2025-07-28 02:01:50,770 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:02:22] 2025-07-28 02:01:50,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:02:22] 2025-07-28 02:01:50,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:02:22] 2025-07-28 02:01:50,770 | INFO     | aborting loop
[2025-07-27 22:02:22] 2025-07-28 02:01:50,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:02:22] 2025-07-28 02:01:51,192 | INFO     | all job control threads have been joined
[2025-07-27 22:02:22] 2025-07-28 02:01:51,510 | INFO     | all data control threads have been joined
[2025-07-27 22:02:22] 2025-07-28 02:01:51,775 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:51,776 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:51,776 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:51,856 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:51,966 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:51,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:02:22] 2025-07-28 02:01:52,002 | INFO     | all payload control threads have been joined
[2025-07-27 22:02:22] 2025-07-28 02:01:52,197 | INFO     | [job] control thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:52,262 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:52,306 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:52,515 | INFO     | [data] control thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:53,002 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:53,007 | INFO     | [payload] control thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:53,092 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:53,193 | INFO     | [job] validate thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:53,979 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:01:54,778 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:02:01,681 | INFO     | job.realtimelogging is not enabled
[2025-07-27 22:02:22] 2025-07-28 02:02:02,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:02:22] 2025-07-28 02:02:02,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356233197376)>', '<ExcThread(monitor, started 140355747956480)>']
[2025-07-27 22:02:22] 2025-07-28 02:02:07,785 | INFO     | all workflow threads have been joined
[2025-07-27 22:02:22] 2025-07-28 02:02:07,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:02:22] 2025-07-28 02:02:07,787 | INFO     | traces error code: 0
[2025-07-27 22:02:22] 2025-07-28 02:02:07,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:02:22] 2025-07-28 02:02:22,066 | INFO     | PID=1043100 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:02:22] 2025-07-28 02:02:22,067 | INFO     | .. there are 10 such processes running
[2025-07-27 22:02:22] 2025-07-28 02:02:22,068 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:02:22] 2025-07-28 02:02:22,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:02:22] 2025-07-28 02:02:22,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:02:22] 2025-07-28 02:02:22,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:02:22] 2025-07-28 02:02:22,068 | INFO     | [monitor] control thread has ended
[2025-07-27 22:02:22] 2025-07-28 02:02:22,180 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:02:22] 2025-07-28 02:02:22,184 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:02:22] 2025-07-28 02:02:22,189 [wrapper] pilotpid: 1043100
[2025-07-27 22:02:22] 2025-07-28 02:02:22,194 [wrapper] Pilot exit status: 0
[2025-07-27 22:02:22] 2025-07-28 02:02:22,213 [wrapper] pandaids: 6747626229
[2025-07-27 22:02:22] 2025-07-28 02:02:22,284 [wrapper] cleanup supervisor_pilot 1198118 1043101
[2025-07-27 22:02:22] 2025-07-28 02:02:22,289 [wrapper] Test setup, not cleaning
[2025-07-27 22:02:22] 2025-07-28 02:02:22,295 [wrapper] apfmon messages muted
[2025-07-27 22:02:22] 2025-07-28 02:02:22,298 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:02:22] 2025-07-28 02:02:22,300 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:02:22]  *** Error codes and diagnostics ***
[2025-07-27 22:02:22]     "exeErrorCode": 0,
[2025-07-27 22:02:22]     "exeErrorDiag": "",
[2025-07-27 22:02:22]     "pilotErrorCode": 0,
[2025-07-27 22:02:22]     "pilotErrorDiag": "",
[2025-07-27 22:02:22]  *** Listing of results directory ***
[2025-07-27 22:02:22] total 436888
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-27 22:02:22] -rwx------. 1 boincer umatlas     36292 Jul 27 15:14 runpilot2-wrapper.sh
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:14 queuedata.json
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:02:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:33 run_atlas
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:33 job.xml
[2025-07-27 22:02:22] -rw-r--r--. 2 boincer umatlas 233704170 Jul 27 20:33 EVNT.45743347._002944.pool.root.1
[2025-07-27 22:02:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:33 start_atlas.sh
[2025-07-27 22:02:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:33 shared
[2025-07-27 22:02:22] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 20:33 input.tar.gz
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:33 boinc_lockfile
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 20:33 pandaJob.out
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas    980125 Jul 27 20:33 agis_schedconf.cvmfs.json
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:02:22] drwx------. 4 boincer umatlas      4096 Jul 27 20:33 pilot3
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas      6895 Jul 27 22:00 init_data.xml
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas 208153081 Jul 27 22:01 HITS.45743349._054331.pool.root.1
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas       529 Jul 27 22:01 boinc_task_state.xml
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas      1030 Jul 27 22:01 memory_monitor_summary.json
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas    311087 Jul 27 22:01 log.45743349._054331.job.log.tgz.1
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas      7775 Jul 27 22:01 heartbeat.json
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:02 wrapper_checkpoint.txt
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas       823 Jul 27 22:02 pilotlog.txt
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas        95 Jul 27 22:02 pilot_heartbeat.json
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:02 boinc_mmap_file
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas    511704 Jul 27 22:02 log.45743349._054331.job.log.1
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas       357 Jul 27 22:02 output.list
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:02 runtime_log
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas    839680 Jul 27 22:02 result.tar.gz
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 22:02 runtime_log.err
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas       652 Jul 27 22:02 cclNDmr0L07n9Rq4apOajLDm4fhM0noT9bVof3QYDmB02KDm8sGbNm.diag
[2025-07-27 22:02:22] -rw-r--r--. 1 boincer umatlas     21955 Jul 27 22:02 stderr.txt
[2025-07-27 22:02:22] HITS file was successfully produced:
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas 208153081 Jul 27 22:01 shared/HITS.pool.root.1
[2025-07-27 22:02:22]  *** Contents of shared directory: ***
[2025-07-27 22:02:22] total 432880
[2025-07-27 22:02:22] -rw-r--r--. 2 boincer umatlas 233704170 Jul 27 20:33 ATLAS.root_0
[2025-07-27 22:02:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:33 start_atlas.sh
[2025-07-27 22:02:22] -rw-r--r--. 2 boincer umatlas    542898 Jul 27 20:33 input.tar.gz
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas 208153081 Jul 27 22:01 HITS.pool.root.1
[2025-07-27 22:02:22] -rw-------. 1 boincer umatlas    839680 Jul 27 22:02 result.tar.gz
22:02:23 (1038663): run_atlas exited; CPU time 36557.024735
22:02:23 (1038663): called boinc_finish(0)

</stderr_txt>
]]>

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