Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:42:56 (2576): wrapper (7.7.26015): starting
20:42:56 (2576): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:42:56] Arguments: --nthreads 8
[2025-07-27 20:42:56] Threads: 8
[2025-07-27 20:42:56] Checking for CVMFS
[2025-07-27 20:42:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:42:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:42:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:42:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:42:56] 2.11.2.0 3213 517673 243448 148829 3 59 20220971 20275201 917 130560 0 182290248 99.988 22559095 19728 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:42:56] CVMFS is ok
[2025-07-27 20:42:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:42:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:42:56] Further information can be found at the LHC@home message board.
[2025-07-27 20:42:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:42:56] Checking for apptainer binary...
[2025-07-27 20:42:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:42:56] Running /usr/bin/apptainer --version
[2025-07-27 20:42:56] apptainer version 1.3.2-1.el7
[2025-07-27 20:42:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:42:57] c-205-38.aglt2.org
[2025-07-27 20:42:57] apptainer works
[2025-07-27 20:42:57] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:42:57] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:42:57] Starting ATLAS job with PandaID=6744843944
[2025-07-27 20:42:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:43:47]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:43:47]  lfn=log.45743349._003473.job.log.tgz.1
[2025-07-27 21:43:47]  mtime=0
[2025-07-27 21:43:47]  protocol_id=None
[2025-07-27 21:43:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 21:43:47]  replicas=None
[2025-07-27 21:43:47]  scope=mc23_13p6TeV
[2025-07-27 21:43:47]  status=None
[2025-07-27 21:43:47]  status_code=0
[2025-07-27 21:43:47]  storage_token=
[2025-07-27 21:43:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744843944/log.45743349._003473.job.log.tgz.1
[2025-07-27 21:43:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/27/log.45743349._003473.job.log.tgz.1
[2025-07-27 21:43:47]  workdir=None
[2025-07-27 21:43:47] ]
[2025-07-27 21:43:47] 2025-07-28 01:43:08,348 | INFO     | transferring file log.45743349._003473.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744843944/log.45743349._003473.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 21:43:47] 2025-07-28 01:43:08,348 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744843944/log.45743349._003473.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._003473.job
[2025-07-27 21:43:47] 2025-07-28 01:43:08,367 | INFO     | adding to output.list: log.45743349._003473.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/27/log.45743349._003473.job.log.tg
[2025-07-27 21:43:47] 2025-07-28 01:43:08,368 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:43:47] 2025-07-28 01:43:08,368 | INFO     | summary of transferred files:
[2025-07-27 21:43:47] 2025-07-28 01:43:08,368 | INFO     |  -- lfn=log.45743349._003473.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:43:47] 2025-07-28 01:43:08,369 | INFO     | stage-out finished correctly
[2025-07-27 21:43:47] 2025-07-28 01:43:08,449 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:43:47] 2025-07-28 01:43:09,200 | INFO     | monitor loop #275: job 0:6744843944 is in state 'finished'
[2025-07-27 21:43:47] 2025-07-28 01:43:09,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:43:47] 2025-07-28 01:43:11,047 | INFO     | job 6744843944 has state=finished
[2025-07-27 21:43:47] 2025-07-28 01:43:11,047 | INFO     | preparing for final server update for job 6744843944 in state='finished'
[2025-07-27 21:43:47] 2025-07-28 01:43:11,048 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:43:47] 2025-07-28 01:43:11,048 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:43:47] 2025-07-28 01:43:11,048 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:43:47] 2025-07-28 01:43:11,048 | INFO     | job 6744843944 has finished - writing final server update
[2025-07-27 21:43:47] 2025-07-28 01:43:11,048 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:43:47] 2025-07-28 01:43:11,049 | INFO     | executing command: lscpu
[2025-07-27 21:43:47] 2025-07-28 01:43:11,080 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:43:47] 2025-07-28 01:43:11,703 | INFO     | monitor loop #276: job 0:6744843944 is in state 'finished'
[2025-07-27 21:43:47] 2025-07-28 01:43:11,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,206 | INFO     | monitor loop #277: job 0:6744843944 is in state 'finished'
[2025-07-27 21:43:47] 2025-07-28 01:43:14,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,283 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 21:43:47] 2025-07-28 01:43:14,286 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2674.8165625
[2025-07-27 21:43:47] 2025-07-28 01:43:14,288 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744843944/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,288 | INFO     | extracted standard info from prmon json
[2025-07-27 21:43:47] 2025-07-28 01:43:14,288 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:43:47] 2025-07-28 01:43:14,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:43:47] 2025-07-28 01:43:14,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:43:47] 2025-07-28 01:43:14,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:43:47] 2025-07-28 01:43:14,290 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:43:47] 2025-07-28 01:43:14,290 | INFO     | sum of square deviations: 43584073.0
[2025-07-27 21:43:47] 2025-07-28 01:43:14,290 | INFO     | sum of deviations: -5517589049.5
[2025-07-27 21:43:47] 2025-07-28 01:43:14,290 | INFO     | mean x: 1753665265.5
[2025-07-27 21:43:47] 2025-07-28 01:43:14,290 | INFO     | mean y: 2680641.019230769
[2025-07-27 21:43:47] 2025-07-28 01:43:14,290 | INFO     | -- intersect: 222010483018.9959
[2025-07-27 21:43:47] 2025-07-28 01:43:14,290 | INFO     | intersect: 222010483018.9959
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | chi2: 0.04471102926530837
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | -- intersect: 222010483018.9959
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | current memory leak: -126.60 B/s (using 52 data points, chi2=0.04)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | could have reported an average CPU frequency of 2941 MHz (5 samples)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | ..............................
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | . Timing measurements:
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | . get job = 0 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | . initial setup = 2 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | . payload setup = 4 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | . stage-in = 0 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | . payload execution = 3580 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,291 | INFO     | . stage-out = 0 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,292 | INFO     | . log creation = 0 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,292 | INFO     | ..............................
[2025-07-27 21:43:47] 2025-07-28 01:43:14,345 | INFO     | 
[2025-07-27 21:43:47] 2025-07-28 01:43:14,345 | INFO     | job summary report
[2025-07-27 21:43:47] 2025-07-28 01:43:14,345 | INFO     | --------------------------------------------------
[2025-07-27 21:43:47] 2025-07-28 01:43:14,345 | INFO     | PanDA job id: 6744843944
[2025-07-27 21:43:47] 2025-07-28 01:43:14,345 | INFO     | task id: 45743349
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | errors: (none)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | pilot state: finished 
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | transexitcode: 0
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | exeerrorcode: 0
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | exeerrordiag: 
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | exitcode: 0
[2025-07-27 21:43:47] 2025-07-28 01:43:14,346 | INFO     | exitmsg: OK
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | cpuconsumptiontime: 26244 s
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | nevents: 400
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | neventsw: 0
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | pid: 12690
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | pgrp: 12690
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | corecount: 8
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | event service: False
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | sizes: {0: 2397298, 1: 2397497, 3: 2397759, 11: 2397787, 3588: 2423567, 3590: 2432749, 3596: 2432919}
[2025-07-27 21:43:47] 2025-07-28 01:43:14,347 | INFO     | --------------------------------------------------
[2025-07-27 21:43:47] 2025-07-28 01:43:14,348 | INFO     | 
[2025-07-27 21:43:47] 2025-07-28 01:43:14,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 21:43:47] 2025-07-28 01:43:14,366 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,367 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,367 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:43:47] 2025-07-28 01:43:14,369 | INFO     | job 6744843944 has completed (purged errors)
[2025-07-27 21:43:47] 2025-07-28 01:43:14,369 | INFO     | overall cleanup function is called
[2025-07-27 21:43:47] 2025-07-28 01:43:15,377 | INFO     | --- collectZombieJob: --- 10, [12690]
[2025-07-27 21:43:47] 2025-07-28 01:43:15,377 | INFO     | zombie collector waiting for pid 12690
[2025-07-27 21:43:47] 2025-07-28 01:43:15,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:43:47] 2025-07-28 01:43:15,378 | INFO     | collected zombie processes
[2025-07-27 21:43:47] 2025-07-28 01:43:15,378 | INFO     | will attempt to kill all subprocesses of pid=12690
[2025-07-27 21:43:47] 2025-07-28 01:43:15,471 | INFO     | process IDs to be killed: [12690] (in reverse order)
[2025-07-27 21:43:47] 2025-07-28 01:43:15,511 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:43:47] 2025-07-28 01:43:15,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:43:47] 2025-07-28 01:43:15,513 | INFO     | did not find any defunct processes belonging to 12690
[2025-07-27 21:43:47] 2025-07-28 01:43:15,515 | INFO     | did not find any defunct processes belonging to 12690
[2025-07-27 21:43:47] 2025-07-28 01:43:15,516 | INFO     | ready for new job
[2025-07-27 21:43:47] 2025-07-28 01:43:15,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:43:47] 2025-07-28 01:43:15,517 | INFO     | ***************************************
[2025-07-27 21:43:47] 2025-07-28 01:43:15,517 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:43:47] 2025-07-28 01:43:15,517 | INFO     | ***************************************
[2025-07-27 21:43:47] 2025-07-28 01:43:15,517 | INFO     | 
[2025-07-27 21:43:47] 2025-07-28 01:43:15,518 | INFO     | architecture information:
[2025-07-27 21:43:47] 2025-07-28 01:43:15,519 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:43:47] 2025-07-28 01:43:15,532 | INFO     | cat /etc/os-release:
[2025-07-27 21:43:47] NAME="CentOS Linux"
[2025-07-27 21:43:47] VERSION="7 (Core)"
[2025-07-27 21:43:47] ID="centos"
[2025-07-27 21:43:47] ID_LIKE="rhel fedora"
[2025-07-27 21:43:47] VERSION_ID="7"
[2025-07-27 21:43:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:43:47] ANSI_COLOR="0;31"
[2025-07-27 21:43:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:43:47] HOME_URL="https://www.centos.org/"
[2025-07-27 21:43:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:43:47] 
[2025-07-27 21:43:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:43:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:43:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:43:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:43:47] 
[2025-07-27 21:43:47] 2025-07-28 01:43:15,532 | INFO     | ***************************************
[2025-07-27 21:43:47] 2025-07-28 01:43:16,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 21:43:47] 2025-07-28 01:43:16,053 | INFO     | sufficient remaining disk space (33052164096 B)
[2025-07-27 21:43:47] 2025-07-28 01:43:16,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:43:47] 2025-07-28 01:43:16,053 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:43:47] 2025-07-28 01:43:16,053 | INFO     | update_server=False
[2025-07-27 21:43:47] 2025-07-28 01:43:16,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:43:47] 2025-07-28 01:43:16,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:43:47] 2025-07-28 01:43:16,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:43:47] 2025-07-28 01:43:16,054 | INFO     | aborting loop
[2025-07-27 21:43:47] 2025-07-28 01:43:16,268 | INFO     | all payload control threads have been joined
[2025-07-27 21:43:47] 2025-07-28 01:43:16,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:43:47] 2025-07-28 01:43:16,735 | INFO     | all job control threads have been joined
[2025-07-27 21:43:47] 2025-07-28 01:43:17,059 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:17,059 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:17,060 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:17,083 | INFO     | all data control threads have been joined
[2025-07-27 21:43:47] 2025-07-28 01:43:17,227 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:17,270 | INFO     | [payload] control thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:17,741 | INFO     | [job] control thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:17,761 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:17,866 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:18,088 | INFO     | [data] control thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:18,259 | INFO     | [job] validate thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:18,404 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:18,407 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:18,464 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:18,655 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:19,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:43:47] 2025-07-28 01:43:23,004 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:26,916 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:43:47] 2025-07-28 01:43:27,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:43:47] 2025-07-28 01:43:29,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651637315392)>', '<ExcThread(monitor, started 140651337324288)>']
[2025-07-27 21:43:47] 2025-07-28 01:43:34,063 | INFO     | all workflow threads have been joined
[2025-07-27 21:43:47] 2025-07-28 01:43:34,064 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:43:47] 2025-07-28 01:43:34,064 | INFO     | traces error code: 0
[2025-07-27 21:43:47] 2025-07-28 01:43:34,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:43:47] 2025-07-28 01:43:46,855 | INFO     | PID=6253 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 21:43:47] 2025-07-28 01:43:46,855 | INFO     | .. there are 2 such processes running
[2025-07-27 21:43:47] 2025-07-28 01:43:46,856 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:43:47] 2025-07-28 01:43:46,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:43:47] 2025-07-28 01:43:46,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:43:47] 2025-07-28 01:43:46,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:43:47] 2025-07-28 01:43:46,856 | INFO     | [monitor] control thread has ended
[2025-07-27 21:43:47] 2025-07-28 01:43:46,939 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:43:47] 2025-07-28 01:43:46,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:43:47] 2025-07-28 01:43:46,944 [wrapper] pilotpid: 6253
[2025-07-27 21:43:47] 2025-07-28 01:43:46,948 [wrapper] Pilot exit status: 0
[2025-07-27 21:43:47] 2025-07-28 01:43:46,957 [wrapper] pandaids: 6744843944
[2025-07-27 21:43:47] 2025-07-28 01:43:46,977 [wrapper] cleanup supervisor_pilot 22135 6254
[2025-07-27 21:43:47] 2025-07-28 01:43:46,979 [wrapper] Test setup, not cleaning
[2025-07-27 21:43:47] 2025-07-28 01:43:46,981 [wrapper] apfmon messages muted
[2025-07-27 21:43:47] 2025-07-28 01:43:46,984 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:43:47] 2025-07-28 01:43:46,986 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:43:47]  *** Error codes and diagnostics ***
[2025-07-27 21:43:47]     "exeErrorCode": 0,
[2025-07-27 21:43:47]     "exeErrorDiag": "",
[2025-07-27 21:43:47]     "pilotErrorCode": 0,
[2025-07-27 21:43:47]     "pilotErrorDiag": "",
[2025-07-27 21:43:47]  *** Listing of results directory ***
[2025-07-27 21:43:47] total 344048
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas    530466 Jul 24 13:03 pilot3.tar.gz
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas      5112 Jul 24 13:21 queuedata.json
[2025-07-27 21:43:47] -rwx------ 1 boincer umatlas     36292 Jul 24 13:21 runpilot2-wrapper.sh
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas       100 Jul 27 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:43:47] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 20:42 run_atlas
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas       105 Jul 27 20:42 job.xml
[2025-07-27 21:43:47] -rw-r--r-- 2 boincer umatlas 145172753 Jul 27 20:42 EVNT.45743347._000195.pool.root.1
[2025-07-27 21:43:47] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 20:42 start_atlas.sh
[2025-07-27 21:43:47] drwxrwx--x 2 boincer umatlas      4096 Jul 27 20:42 shared
[2025-07-27 21:43:47] -rw-r--r-- 2 boincer umatlas    542879 Jul 27 20:42 input.tar.gz
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas         0 Jul 27 20:42 boinc_lockfile
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas      2560 Jul 27 20:42 pandaJob.out
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas    980125 Jul 27 20:43 agis_schedconf.cvmfs.json
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas   1593052 Jul 27 20:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:43:47] drwx------ 4 boincer umatlas      4096 Jul 27 20:43 pilot3
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas      6050 Jul 27 21:38 init_data.xml
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas 201924390 Jul 27 21:42 HITS.45743349._003473.pool.root.1
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas       529 Jul 27 21:42 boinc_task_state.xml
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas      1047 Jul 27 21:43 memory_monitor_summary.json
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas    294822 Jul 27 21:43 log.45743349._003473.job.log.tgz.1
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas      7836 Jul 27 21:43 heartbeat.json
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 21:43 boinc_mmap_file
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas        27 Jul 27 21:43 wrapper_checkpoint.txt
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas        95 Jul 27 21:43 pilot_heartbeat.json
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas       819 Jul 27 21:43 pilotlog.txt
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas    373515 Jul 27 21:43 log.45743349._003473.job.log.1
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas       357 Jul 27 21:43 output.list
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas       620 Jul 27 21:43 runtime_log
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas    686080 Jul 27 21:43 result.tar.gz
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 21:43 runtime_log.err
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas       657 Jul 27 21:43 ospLDmmoEz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmalMLDmKOzIHm.diag
[2025-07-27 21:43:47] -rw-r--r-- 1 boincer umatlas     21605 Jul 27 21:43 stderr.txt
[2025-07-27 21:43:47] HITS file was successfully produced:
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas 201924390 Jul 27 21:42 shared/HITS.pool.root.1
[2025-07-27 21:43:47]  *** Contents of shared directory: ***
[2025-07-27 21:43:47] total 340188
[2025-07-27 21:43:47] -rw-r--r-- 2 boincer umatlas 145172753 Jul 27 20:42 ATLAS.root_0
[2025-07-27 21:43:47] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 20:42 start_atlas.sh
[2025-07-27 21:43:47] -rw-r--r-- 2 boincer umatlas    542879 Jul 27 20:42 input.tar.gz
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas 201924390 Jul 27 21:42 HITS.pool.root.1
[2025-07-27 21:43:47] -rw------- 1 boincer umatlas    686080 Jul 27 21:43 result.tar.gz
21:43:48 (2576): run_atlas exited; CPU time 26210.313100
21:43:48 (2576): called boinc_finish(0)

</stderr_txt>
]]>

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