Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-28 19:33:16 (14584): Detected: vboxwrapper 26206
2025-07-28 19:33:16 (14584): Detected: BOINC client v7.24.1
2025-07-28 19:33:16 (14584): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-07-28 19:33:17 (14584): Successfully copied 'init_data.xml' to the shared directory.
2025-07-28 19:33:17 (14584): Create VM. (boinc_fd69c2ef029ed2ce, slot#5)
2025-07-28 19:33:18 (14584): Setting Memory Size for VM. (4800MB)
2025-07-28 19:33:18 (14584): Setting CPU Count for VM. (8)
2025-07-28 19:33:18 (14584): Setting Chipset Options for VM.
2025-07-28 19:33:18 (14584): Setting Graphics Controller Options for VM.
2025-07-28 19:33:19 (14584): Setting Boot Options for VM.
2025-07-28 19:33:19 (14584): Setting Network Configuration for NAT.
2025-07-28 19:33:19 (14584): Enabling VM Network Access.
2025-07-28 19:33:19 (14584): Disabling USB Support for VM.
2025-07-28 19:33:20 (14584): Disabling COM Port Support for VM.
2025-07-28 19:33:20 (14584): Disabling LPT Port Support for VM.
2025-07-28 19:33:20 (14584): Disabling Audio Support for VM.
2025-07-28 19:33:21 (14584): Disabling Clipboard Support for VM.
2025-07-28 19:33:21 (14584): Disabling Drag and Drop Support for VM.
2025-07-28 19:33:21 (14584): Adding storage controller(s) to VM.
2025-07-28 19:33:21 (14584): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-28 19:33:24 (14584): Adding VirtualBox Guest Additions to VM.
2025-07-28 19:33:24 (14584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-28 19:33:25 (14584): forwarding host port 54500 to guest port 80
2025-07-28 19:33:25 (14584): Enabling remote desktop for VM.
2025-07-28 19:33:25 (14584): Required extension pack not installed, remote desktop not enabled.
2025-07-28 19:33:25 (14584): Enabling shared directory for VM.
2025-07-28 19:33:26 (14584): Starting VM using VBoxManage interface. (boinc_fd69c2ef029ed2ce, slot#5)
2025-07-28 19:33:31 (14584): Successfully started VM. (PID = '15016')
2025-07-28 19:33:31 (14584): Reporting VM Process ID to BOINC.
2025-07-28 19:33:31 (14584): Guest Log: BIOS: VirtualBox 7.0.10
2025-07-28 19:33:31 (14584): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 19:33:31 (14584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 19:33:31 (14584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 19:33:31 (14584): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 19:33:31 (14584): Detected: Web Application Enabled (http://localhost:54500)
2025-07-28 19:33:31 (14584): Preference change detected
2025-07-28 19:33:31 (14584): Setting CPU throttle for VM. (100%)
2025-07-28 19:33:31 (14584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 19:33:33 (14584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 19:33:33 (14584): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 19:33:35 (14584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 19:33:35 (14584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 19:33:35 (14584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 19:33:40 (14584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 19:33:40 (14584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 19:33:44 (14584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.000121 main     Log opened 2025-07-28T19:33:42.665233000Z
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.000191 main     OS Product: Linux
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.000214 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.000232 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.000250 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.000251 main     Process ID: 1367
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.000251 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 19:33:44 (14584): Guest Log: 00:00:00.001282 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 19:33:44 (14584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 19:33:44 (14584): Guest Log: [INFO] Mounting shared directory
2025-07-28 19:33:45 (14584): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 19:33:51 (14584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 19:33:51 (14584): Guest Log: [INFO] Detected branch: prod
2025-07-28 19:33:51 (14584): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 19:33:51 (14584): Guest Log: Copying input files
2025-07-28 19:33:52 (14584): Guest Log: Copied input files into RunAtlas.
2025-07-28 19:33:52 (14584): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 19:33:52 (14584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 19:33:52 (14584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 19:33:52 (14584): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 19:33:54 (14584): Guest Log: 00:00:10.004285 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 070 437 000ns (GuestNow=1 753 698 834 597 957 000 ns GuestLast=1 753 731 222 668 394 000 ns fSetTimeLastLoop=true )
2025-07-28 19:34:02 (14584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 19:34:03 (14584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 19:34:03 (14584): Guest Log: 2.6.3.0 1649 0 32164 148845 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 19:34:03 (14584): Guest Log: copied the webapp to /var/www
2025-07-28 19:34:03 (14584): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-28 19:34:03 (14584): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-28 19:34:03 (14584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 19:34:03 (14584): Guest Log:  *** Starting ATLAS job. (PandaID=6747626260 taskID=45743349) ***
2025-07-28 21:14:38 (14584): Status Report: Elapsed Time: '6000.110380'
2025-07-28 21:14:38 (14584): Status Report: CPU Time: '43352.812500'
2025-07-28 22:13:52 (14584): Guest Log:  *** Job finished ***
2025-07-28 22:13:52 (14584): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:36,472 | INFO     | [data] queue_monitor thread has finished
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:43,031 | INFO     | job.realtimelogging is not enabled
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:44,041 | INFO     | [payload] run_realtimelog thread has finished
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:45,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463006299968)>', '<ExcThread(monitor, started 140462107113216)>']
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:45,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:45,737 | INFO     | [monitor] control thread has ended
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,576 | INFO     | all workflow threads have been joined
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,577 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,577 | INFO     | traces error code: 0
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,637 [wrapper] ==== pilot stdout END ====
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,641 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,644 [wrapper] pilotpid: 6020
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,647 [wrapper] Pilot exit status: 0
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,771 [wrapper] pandaids: 6747626260
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,795 [wrapper] cleanup supervisor_pilot  6332 6021
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,801 [wrapper] Test setup, not cleaning
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,806 [wrapper] apfmon messages muted
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,809 [wrapper] ==== wrapper stdout END ====
2025-07-28 22:13:52 (14584): Guest Log: 2025-07-28 13:13:50,813 [wrapper] ==== wrapper stderr END ====
2025-07-28 22:13:52 (14584): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 22:13:52 (14584): Guest Log:     "exeErrorCode": 0,
2025-07-28 22:13:52 (14584): Guest Log:     "exeErrorDiag": "",
2025-07-28 22:13:52 (14584): Guest Log:     "pilotErrorCode": 0,
2025-07-28 22:13:52 (14584): Guest Log:     "pilotErrorDiag": "",
2025-07-28 22:13:52 (14584): Guest Log:  *** Listing of results directory ***
2025-07-28 22:13:52 (14584): Guest Log: total 208088
2025-07-28 22:13:52 (14584): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 19:12 pilot3.tar.gz
2025-07-28 22:13:52 (14584): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 19:13 runpilot2-wrapper.sh
2025-07-28 22:13:52 (14584): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 19:13 queuedata.json
2025-07-28 22:13:52 (14584): Guest Log: -rwxr-xr-x. 1 atlas atlas      6093 Jul 28 10:33 init_data.xml
2025-07-28 22:13:52 (14584): Guest Log: -rwxr-xr-x. 1 atlas atlas    542895 Jul 28 10:33 input.tar.gz
2025-07-28 22:13:52 (14584): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 28 10:33 start_atlas.sh
2025-07-28 22:13:52 (14584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 28 10:33 EVNT.45743347._002945.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 22:13:52 (14584): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 28 10:34 pandaJob.out
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas    978460 Jul 28 10:35 agis_schedconf.cvmfs.json
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 28 10:35 agis_ddmendpoints.agis.ALL.json
2025-07-28 22:13:52 (14584): Guest Log: drwx------. 4 atlas atlas      4096 Jul 28 10:36 pilot3
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas        95 Jul 28 13:12 pilot_heartbeat.json
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas 207001126 Jul 28 13:13 HITS.45743349._054362.pool.root.1
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas      1031 Jul 28 13:13 memory_monitor_summary.json
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas    349568 Jul 28 13:13 log.45743349._054362.job.log.tgz.1
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas      7827 Jul 28 13:13 heartbeat.json
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas      5127 Jul 28 13:13 pilotlog.txt
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas    786518 Jul 28 13:13 log.45743349._054362.job.log.1
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas       357 Jul 28 13:13 output.list
2025-07-28 22:13:52 (14584): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 28 13:13 runtime_log
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas   1157120 Jul 28 13:13 result.tar.gz
2025-07-28 22:13:52 (14584): Guest Log: -rw-r--r--. 1 atlas atlas      8608 Jul 28 13:13 runtime_log.err
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas       659 Jul 28 13:13 becMDmtzL07n9Rq4apOajLDm4fhM0noT9bVof3QYDmxz2KDmqzlmrm.diag
2025-07-28 22:13:52 (14584): Guest Log: Looking for outputfile HITS.45743349._054362.pool.root.1
2025-07-28 22:13:52 (14584): Guest Log: HITS file was successfully produced
2025-07-28 22:13:52 (14584): Guest Log: -rw-------. 1 atlas atlas 207001126 Jul 28 13:13 /home/atlas/RunAtlas/HITS.45743349._054362.pool.root.1
2025-07-28 22:13:53 (14584): Guest Log: Successfully finished the ATLAS job!
2025-07-28 22:13:53 (14584): Guest Log: Copying the results back to the shared directory!
2025-07-28 22:13:53 (14584): Guest Log:  *** Contents of shared directory: ***
2025-07-28 22:13:53 (14584): Guest Log: total 426912
2025-07-28 22:13:53 (14584): Guest Log: -rwxrwxrwx. 1 root root 228425696 Jul 28 10:33 ATLAS.root_0
2025-07-28 22:13:53 (14584): Guest Log: -rwxrwxrwx. 1 root root 207001126 Jul 28 13:13 HITS.pool.root.1
2025-07-28 22:13:53 (14584): Guest Log: -rwxrwxrwx. 1 root root      6093 Jul 28 10:33 init_data.xml
2025-07-28 22:13:53 (14584): Guest Log: -rwxrwxrwx. 1 root root    542895 Jul 28 00:50 input.tar.gz
2025-07-28 22:13:53 (14584): Guest Log: -rwxrwxrwx. 1 root root   1157120 Jul 28 13:13 result.tar.gz
2025-07-28 22:13:53 (14584): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 28 00:50 start_atlas.sh
2025-07-28 22:13:53 (14584): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 22:13:53 (14584): VM Completion File Detected.
2025-07-28 22:13:53 (14584): Powering off VM.
2025-07-28 22:13:54 (14584): Successfully stopped VM.
2025-07-28 22:13:54 (14584): Deregistering VM. (boinc_fd69c2ef029ed2ce, slot#5)
2025-07-28 22:13:54 (14584): Removing network bandwidth throttle group from VM.
2025-07-28 22:13:55 (14584): Removing VM from VirtualBox.
22:14:00 (14584): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN