Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:46:13 (24137): wrapper (7.7.26015): starting
20:46:13 (24137): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:46:13] Arguments: --nthreads 12
[2025-07-27 20:46:13] Threads: 12
[2025-07-27 20:46:13] Checking for CVMFS
[2025-07-27 20:46:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:46:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:46:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:46:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:46:13] 2.11.2.0 3081 112693 101212 148829 3 59 14924775 20275200 1 130560 0 38818714 99.970 9654777 10545 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:46:13] CVMFS is ok
[2025-07-27 20:46:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:46:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:46:13] Further information can be found at the LHC@home message board.
[2025-07-27 20:46:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:46:13] Checking for apptainer binary...
[2025-07-27 20:46:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:46:13] Running /usr/bin/apptainer --version
[2025-07-27 20:46:13] apptainer version 1.3.2-1.el7
[2025-07-27 20:46:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:46:14] c-205-29.aglt2.org
[2025-07-27 20:46:14] apptainer works
[2025-07-27 20:46:14] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:46:14] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:46:14] Starting ATLAS job with PandaID=6747599876
[2025-07-27 20:46:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:07:26]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:07:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/82/log.45743349._054259.job.log.tgz.1
[2025-07-27 22:07:26]  workdir=None
[2025-07-27 22:07:26] ]
[2025-07-27 22:07:26] 2025-07-28 02:06:48,662 | INFO     | transferring file log.45743349._054259.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747599876/log.45743349._054259.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 22:07:26] 2025-07-28 02:06:48,662 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747599876/log.45743349._054259.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._054259.job
[2025-07-27 22:07:26] 2025-07-28 02:06:48,684 | INFO     | adding to output.list: log.45743349._054259.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/82/log.45743349._054259.job.log.tg
[2025-07-27 22:07:26] 2025-07-28 02:06:48,685 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:07:26] 2025-07-28 02:06:48,685 | INFO     | summary of transferred files:
[2025-07-27 22:07:26] 2025-07-28 02:06:48,686 | INFO     |  -- lfn=log.45743349._054259.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:07:26] 2025-07-28 02:06:48,686 | INFO     | stage-out finished correctly
[2025-07-27 22:07:26] 2025-07-28 02:06:48,772 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:07:26] 2025-07-28 02:06:48,851 | INFO     | job 6747599876 has state=finished
[2025-07-27 22:07:26] 2025-07-28 02:06:48,851 | INFO     | preparing for final server update for job 6747599876 in state='finished'
[2025-07-27 22:07:26] 2025-07-28 02:06:48,852 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:07:26] 2025-07-28 02:06:48,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:07:26] 2025-07-28 02:06:48,852 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:07:26] 2025-07-28 02:06:48,852 | INFO     | job 6747599876 has finished - writing final server update
[2025-07-27 22:07:26] 2025-07-28 02:06:48,853 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:07:26] 2025-07-28 02:06:48,854 | INFO     | executing command: lscpu
[2025-07-27 22:07:26] 2025-07-28 02:06:48,881 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:07:26] 2025-07-28 02:06:51,648 | WARNING  | process 1778 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 22:07:26] 2025-07-28 02:06:51,648 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747599876/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:07:26] 2025-07-28 02:06:51,649 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747599876/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:07:26] 2025-07-28 02:06:51,650 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4197237 B
[2025-07-27 22:07:26] 2025-07-28 02:06:51,650 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-07-27 22:07:26] 2025-07-28 02:06:51,650 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:07:26] 2025-07-28 02:06:53,900 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 22:07:26] 2025-07-28 02:06:53,907 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-07-27 22:07:26] 2025-07-28 02:06:53,910 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747599876/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:07:26] 2025-07-28 02:06:53,911 | INFO     | extracted standard info from prmon json
[2025-07-27 22:07:26] 2025-07-28 02:06:53,911 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:07:26] 2025-07-28 02:06:53,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:07:26] 2025-07-28 02:06:53,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:07:26] 2025-07-28 02:06:53,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:07:26] 2025-07-28 02:06:53,914 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:07:26] 2025-07-28 02:06:53,914 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 22:07:26] 2025-07-28 02:06:53,914 | INFO     | sum of deviations: -8147975203.999999
[2025-07-27 22:07:26] 2025-07-28 02:06:53,914 | INFO     | mean x: 1753666090.5
[2025-07-27 22:07:26] 2025-07-28 02:06:53,915 | INFO     | mean y: 2782271.222222222
[2025-07-27 22:07:26] 2025-07-28 02:06:53,915 | INFO     | -- intersect: 123485015086.15915
[2025-07-27 22:07:26] 2025-07-28 02:06:53,915 | INFO     | intersect: 123485015086.15915
[2025-07-27 22:07:26] 2025-07-28 02:06:53,915 | INFO     | chi2: 0.08358234286003142
[2025-07-27 22:07:26] 2025-07-28 02:06:53,915 | INFO     | -- intersect: 123485015086.15915
[2025-07-27 22:07:26] 2025-07-28 02:06:53,915 | INFO     | current memory leak: -70.41 B/s (using 72 data points, chi2=0.08)
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | could have reported an average CPU frequency of 2024 MHz (6 samples)
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | ..............................
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | . Timing measurements:
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | . get job = 0 s
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | . initial setup = 3 s
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | . payload setup = 9 s
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | . stage-in = 0 s
[2025-07-27 22:07:26] 2025-07-28 02:06:53,916 | INFO     | . payload execution = 4788 s
[2025-07-27 22:07:26] 2025-07-28 02:06:53,917 | INFO     | . stage-out = 0 s
[2025-07-27 22:07:26] 2025-07-28 02:06:53,917 | INFO     | . log creation = 0 s
[2025-07-27 22:07:26] 2025-07-28 02:06:53,917 | INFO     | ..............................
[2025-07-27 22:07:26] 2025-07-28 02:06:53,923 | INFO     | sufficient remaining disk space (29512171520 B)
[2025-07-27 22:07:26] 2025-07-28 02:06:53,929 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 22:07:26] 2025-07-28 02:06:54,003 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6747599876: 4498074 B (within 2537553920 B limit)
[2025-07-27 22:07:26] 2025-07-28 02:06:54,003 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6747599876/HITS.45743349._054259.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 22:07:26] 2025-07-28 02:06:54,004 | INFO     | total size of present files: 0 B (workdir size: 4498074 B)
[2025-07-27 22:07:26] 2025-07-28 02:06:54,004 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6747599876/HITS.45743349._054259.pool.root.1 since it does not exist
[2025-07-27 22:07:26] 2025-07-28 02:06:54,094 | INFO     | number of running child processes to parent process 1778: 1
[2025-07-27 22:07:26] 2025-07-28 02:06:54,094 | INFO     | maximum number of monitored processes: 6
[2025-07-27 22:07:26] 2025-07-28 02:06:54,094 | INFO     | aborting job monitoring since job object (job id=6747599876) has expired
[2025-07-27 22:07:26] 2025-07-28 02:06:54,504 | INFO     | 
[2025-07-27 22:07:26] 2025-07-28 02:06:54,504 | INFO     | job summary report
[2025-07-27 22:07:26] 2025-07-28 02:06:54,504 | INFO     | --------------------------------------------------
[2025-07-27 22:07:26] 2025-07-28 02:06:54,505 | INFO     | PanDA job id: 6747599876
[2025-07-27 22:07:26] 2025-07-28 02:06:54,505 | INFO     | task id: 45743349
[2025-07-27 22:07:26] 2025-07-28 02:06:54,505 | INFO     | errors: (none)
[2025-07-27 22:07:26] 2025-07-28 02:06:54,505 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:07:26] 2025-07-28 02:06:54,505 | INFO     | pilot state: finished 
[2025-07-27 22:07:26] 2025-07-28 02:06:54,505 | INFO     | transexitcode: 0
[2025-07-27 22:07:26] 2025-07-28 02:06:54,505 | INFO     | exeerrorcode: 0
[2025-07-27 22:07:26] 2025-07-28 02:06:54,506 | INFO     | exeerrordiag: 
[2025-07-27 22:07:26] 2025-07-28 02:06:54,506 | INFO     | exitcode: 0
[2025-07-27 22:07:26] 2025-07-28 02:06:54,506 | INFO     | exitmsg: OK
[2025-07-27 22:07:26] 2025-07-28 02:06:54,506 | INFO     | cpuconsumptiontime: 52014 s
[2025-07-27 22:07:26] 2025-07-28 02:06:54,506 | INFO     | nevents: 400
[2025-07-27 22:07:26] 2025-07-28 02:06:54,506 | INFO     | neventsw: 0
[2025-07-27 22:07:26] 2025-07-28 02:06:54,507 | INFO     | pid: 1778
[2025-07-27 22:07:26] 2025-07-28 02:06:54,507 | INFO     | pgrp: 1778
[2025-07-27 22:07:26] 2025-07-28 02:06:54,507 | INFO     | corecount: 12
[2025-07-27 22:07:26] 2025-07-28 02:06:54,507 | INFO     | event service: False
[2025-07-27 22:07:26] 2025-07-28 02:06:54,507 | INFO     | sizes: {0: 2397248, 1: 2397503, 6: 2397765, 12: 2397793, 4802: 2424154, 4804: 2433336, 4809: 2433474}
[2025-07-27 22:07:26] 2025-07-28 02:06:54,507 | INFO     | --------------------------------------------------
[2025-07-27 22:07:26] 2025-07-28 02:06:54,508 | INFO     | 
[2025-07-27 22:07:26] 2025-07-28 02:06:54,508 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:07:26] 2025-07-28 02:06:54,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:07:26] 2025-07-28 02:06:54,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:07:26] 2025-07-28 02:06:54,536 | INFO     | job 6747599876 has completed (purged errors)
[2025-07-27 22:07:26] 2025-07-28 02:06:54,537 | INFO     | overall cleanup function is called
[2025-07-27 22:07:26] 2025-07-28 02:06:55,545 | INFO     | --- collectZombieJob: --- 10, [1778]
[2025-07-27 22:07:26] 2025-07-28 02:06:55,545 | INFO     | zombie collector waiting for pid 1778
[2025-07-27 22:07:26] 2025-07-28 02:06:55,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:07:26] 2025-07-28 02:06:55,545 | INFO     | collected zombie processes
[2025-07-27 22:07:26] 2025-07-28 02:06:55,546 | INFO     | will attempt to kill all subprocesses of pid=1778
[2025-07-27 22:07:26] 2025-07-28 02:06:55,636 | INFO     | process IDs to be killed: [1778] (in reverse order)
[2025-07-27 22:07:26] 2025-07-28 02:06:55,686 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:07:26] 2025-07-28 02:06:55,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:07:26] 2025-07-28 02:06:55,690 | INFO     | did not find any defunct processes belonging to 1778
[2025-07-27 22:07:26] 2025-07-28 02:06:55,694 | INFO     | did not find any defunct processes belonging to 1778
[2025-07-27 22:07:26] 2025-07-28 02:06:55,694 | INFO     | ready for new job
[2025-07-27 22:07:26] 2025-07-28 02:06:55,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:07:26] 2025-07-28 02:06:55,695 | INFO     | ***************************************
[2025-07-27 22:07:26] 2025-07-28 02:06:55,696 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:07:26] 2025-07-28 02:06:55,696 | INFO     | ***************************************
[2025-07-27 22:07:26] 2025-07-28 02:06:55,696 | INFO     | 
[2025-07-27 22:07:26] 2025-07-28 02:06:55,696 | INFO     | architecture information:
[2025-07-27 22:07:26] 2025-07-28 02:06:55,697 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:07:26] 2025-07-28 02:06:55,711 | INFO     | cat /etc/os-release:
[2025-07-27 22:07:26] NAME="CentOS Linux"
[2025-07-27 22:07:26] VERSION="7 (Core)"
[2025-07-27 22:07:26] ID="centos"
[2025-07-27 22:07:26] ID_LIKE="rhel fedora"
[2025-07-27 22:07:26] VERSION_ID="7"
[2025-07-27 22:07:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:07:26] ANSI_COLOR="0;31"
[2025-07-27 22:07:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:07:26] HOME_URL="https://www.centos.org/"
[2025-07-27 22:07:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:07:26] 
[2025-07-27 22:07:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:07:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:07:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:07:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:07:26] 
[2025-07-27 22:07:26] 2025-07-28 02:06:55,712 | INFO     | ***************************************
[2025-07-27 22:07:26] 2025-07-28 02:06:56,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:07:26] 2025-07-28 02:06:56,231 | INFO     | sufficient remaining disk space (29517414400 B)
[2025-07-27 22:07:26] 2025-07-28 02:06:56,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:07:26] 2025-07-28 02:06:56,232 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:07:26] 2025-07-28 02:06:56,232 | INFO     | update_server=False
[2025-07-27 22:07:26] 2025-07-28 02:06:56,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:07:26] 2025-07-28 02:06:56,596 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 22:07:26] 2025-07-28 02:06:56,597 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 22:07:26] 2025-07-28 02:06:56,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:07:26] 2025-07-28 02:06:56,597 | INFO     | will abort loop
[2025-07-27 22:07:26] 2025-07-28 02:06:56,735 | INFO     | all data control threads have been joined
[2025-07-27 22:07:26] 2025-07-28 02:06:56,751 | INFO     | all payload control threads have been joined
[2025-07-27 22:07:26] 2025-07-28 02:06:56,783 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:07:26] 2025-07-28 02:06:57,238 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:57,401 | INFO     | all job control threads have been joined
[2025-07-27 22:07:26] 2025-07-28 02:06:57,468 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:57,484 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:57,603 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:57,712 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:57,740 | INFO     | [data] control thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:57,757 | INFO     | [payload] control thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:57,818 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:58,092 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:58,404 | INFO     | [job] control thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:58,512 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:58,692 | INFO     | [job] validate thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:58,789 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:06:59,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:07:26] 2025-07-28 02:06:59,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:07:26] 2025-07-28 02:07:00,019 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:07:03,366 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:07:07,137 | INFO     | job.realtimelogging is not enabled
[2025-07-27 22:07:26] 2025-07-28 02:07:08,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:07:26] 2025-07-28 02:07:09,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140105828833088)>', '<ExcThread(monitor, started 140105238959872)>']
[2025-07-27 22:07:26] 2025-07-28 02:07:14,269 | INFO     | all workflow threads have been joined
[2025-07-27 22:07:26] 2025-07-28 02:07:14,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:07:26] 2025-07-28 02:07:14,270 | INFO     | traces error code: 0
[2025-07-27 22:07:26] 2025-07-28 02:07:14,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:07:26] 2025-07-28 02:07:26,409 | INFO     | PID=27733 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 22:07:26] 2025-07-28 02:07:26,409 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:07:26] 2025-07-28 02:07:26,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:07:26] 2025-07-28 02:07:26,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:07:26] 2025-07-28 02:07:26,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:07:26] 2025-07-28 02:07:26,410 | INFO     | [monitor] control thread has ended
[2025-07-27 22:07:26] 2025-07-28 02:07:26,498 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:07:26] 2025-07-28 02:07:26,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:07:26] 2025-07-28 02:07:26,506 [wrapper] pilotpid: 27733
[2025-07-27 22:07:26] 2025-07-28 02:07:26,510 [wrapper] Pilot exit status: 0
[2025-07-27 22:07:26] 2025-07-28 02:07:26,526 [wrapper] pandaids: 6747599876
[2025-07-27 22:07:26] 2025-07-28 02:07:26,569 [wrapper] cleanup supervisor_pilot 20701 27734
[2025-07-27 22:07:26] 2025-07-28 02:07:26,573 [wrapper] Test setup, not cleaning
[2025-07-27 22:07:26] 2025-07-28 02:07:26,576 [wrapper] apfmon messages muted
[2025-07-27 22:07:26] 2025-07-28 02:07:26,580 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:07:26] 2025-07-28 02:07:26,584 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:07:26]  *** Error codes and diagnostics ***
[2025-07-27 22:07:26]     "exeErrorCode": 0,
[2025-07-27 22:07:26]     "exeErrorDiag": "",
[2025-07-27 22:07:26]     "pilotErrorCode": 0,
[2025-07-27 22:07:26]     "pilotErrorDiag": "",
[2025-07-27 22:07:26]  *** Listing of results directory ***
[2025-07-27 22:07:26] total 348864
[2025-07-27 22:07:26] -rwx------ 1 boincer umatlas     36292 Jul 27 15:12 runpilot2-wrapper.sh
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 15:12 queuedata.json
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas       100 Jul 27 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:07:26] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 20:46 run_atlas
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas       105 Jul 27 20:46 job.xml
[2025-07-27 22:07:26] -rw-r--r-- 2 boincer umatlas 147094328 Jul 27 20:46 EVNT.45743347._002901.pool.root.1
[2025-07-27 22:07:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 20:46 start_atlas.sh
[2025-07-27 22:07:26] drwxrwx--x 2 boincer umatlas      4096 Jul 27 20:46 shared
[2025-07-27 22:07:26] -rw-r--r-- 2 boincer umatlas    542891 Jul 27 20:46 input.tar.gz
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas         0 Jul 27 20:46 boinc_lockfile
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 20:46 pandaJob.out
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas    980125 Jul 27 20:46 agis_schedconf.cvmfs.json
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas   1593052 Jul 27 20:46 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:07:26] drwx------ 4 boincer umatlas      4096 Jul 27 20:46 pilot3
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 22:00 init_data.xml
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas 204608985 Jul 27 22:06 HITS.45743349._054259.pool.root.1
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas        95 Jul 27 22:06 pilot_heartbeat.json
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas      1048 Jul 27 22:06 memory_monitor_summary.json
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas       529 Jul 27 22:06 boinc_task_state.xml
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas    365720 Jul 27 22:06 log.45743349._054259.job.log.tgz.1
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas      7855 Jul 27 22:06 heartbeat.json
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas        27 Jul 27 22:07 wrapper_checkpoint.txt
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 22:07 boinc_mmap_file
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas       745 Jul 27 22:07 pilotlog.txt
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas    461526 Jul 27 22:07 log.45743349._054259.job.log.1
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas       357 Jul 27 22:07 output.list
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas       620 Jul 27 22:07 runtime_log
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas    849920 Jul 27 22:07 result.tar.gz
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 22:07 runtime_log.err
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas       659 Jul 27 22:07 E6YKDmqyL07n9Rq4apOajLDm4fhM0noT9bVof3QYDmYz2KDmIlR9tm.diag
[2025-07-27 22:07:26] -rw-r--r-- 1 boincer umatlas     22537 Jul 27 22:07 stderr.txt
[2025-07-27 22:07:26] HITS file was successfully produced:
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas 204608985 Jul 27 22:06 shared/HITS.pool.root.1
[2025-07-27 22:07:26]  *** Contents of shared directory: ***
[2025-07-27 22:07:26] total 344848
[2025-07-27 22:07:26] -rw-r--r-- 2 boincer umatlas 147094328 Jul 27 20:46 ATLAS.root_0
[2025-07-27 22:07:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 20:46 start_atlas.sh
[2025-07-27 22:07:26] -rw-r--r-- 2 boincer umatlas    542891 Jul 27 20:46 input.tar.gz
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas 204608985 Jul 27 22:06 HITS.pool.root.1
[2025-07-27 22:07:26] -rw------- 1 boincer umatlas    849920 Jul 27 22:07 result.tar.gz
22:07:28 (24137): run_atlas exited; CPU time 51992.994181
22:07:28 (24137): called boinc_finish(0)

</stderr_txt>
]]>

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