Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:49:33 (4072545): wrapper (7.7.26015): starting
20:49:33 (4072545): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:49:33] Arguments: --nthreads 8
[2025-07-27 20:49:33] Threads: 8
[2025-07-27 20:49:33] Checking for CVMFS
[2025-07-27 20:49:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:49:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:49:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:49:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:49:34] 2.12.6.0 4167112 19122 309956 148829 3 899 32894644 32935936 23360 16776704 1 102332631 99.665 171345861 16362 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 20:49:34] CVMFS is ok
[2025-07-27 20:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:49:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:49:34] Further information can be found at the LHC@home message board.
[2025-07-27 20:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:49:34] Checking for apptainer binary...
[2025-07-27 20:49:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:49:34] Running /usr/bin/apptainer --version
[2025-07-27 20:49:34] apptainer version 1.4.1-1.el9
[2025-07-27 20:49:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:49:34] c7-16-8.aglt2.org
[2025-07-27 20:49:34] apptainer works
[2025-07-27 20:49:34] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:49:34] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:49:34] Starting ATLAS job with PandaID=6747626235
[2025-07-27 20:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:10:17]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:10:17] 2025-07-28 03:09:43,400 | INFO     | monitor loop #576: job 0:6747626235 is in state 'finished'
[2025-07-27 23:10:17] 2025-07-28 03:09:43,400 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:10:17] 2025-07-28 03:09:43,514 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:10:17] 2025-07-28 03:09:43,549 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2938.2523854166666
[2025-07-27 23:10:17] 2025-07-28 03:09:43,567 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747626235/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:10:17] 2025-07-28 03:09:43,568 | INFO     | extracted standard info from prmon json
[2025-07-27 23:10:17] 2025-07-28 03:09:43,568 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:10:17] 2025-07-28 03:09:43,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:10:17] 2025-07-28 03:09:43,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:10:17] 2025-07-28 03:09:43,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:10:17] 2025-07-28 03:09:43,571 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:10:17] 2025-07-28 03:09:43,572 | INFO     | sum of square deviations: 797285738.9927018
[2025-07-27 23:10:17] 2025-07-28 03:09:43,573 | INFO     | sum of deviations: 19364335143.598537
[2025-07-27 23:10:17] 2025-07-28 03:09:43,578 | INFO     | mean x: 1753667985.0072992
[2025-07-27 23:10:17] 2025-07-28 03:09:43,578 | INFO     | mean y: 2151295.401459854
[2025-07-27 23:10:17] 2025-07-28 03:09:43,578 | INFO     | -- intersect: -42590626841.05952
[2025-07-27 23:10:17] 2025-07-28 03:09:43,578 | INFO     | intersect: -42590626841.05952
[2025-07-27 23:10:17] 2025-07-28 03:09:43,579 | INFO     | chi2: 1.7869728228576636
[2025-07-27 23:10:17] 2025-07-28 03:09:43,579 | INFO     | sum of square deviations: 713135628.9924244
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | sum of deviations: 18439054248.34846
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | mean x: 1753667832.5075758
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | mean y: 2149603.6515151514
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | -- intersect: -45341225460.74926
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | intersect: -45341225460.74926
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | chi2: 1.7889923509985572
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | current chi2=1.7889923509985572 (change=-0.11301392584494489 %)
[2025-07-27 23:10:17] 2025-07-28 03:09:43,580 | INFO     | right removable region: 131
[2025-07-27 23:10:17] 2025-07-28 03:09:43,581 | INFO     | sum of square deviations: 713135018.9924244
[2025-07-27 23:10:17] 2025-07-28 03:09:43,581 | INFO     | sum of deviations: -1743795252.901515
[2025-07-27 23:10:17] 2025-07-28 03:09:43,582 | INFO     | mean x: 1753668137.5075758
[2025-07-27 23:10:17] 2025-07-28 03:09:43,582 | INFO     | mean y: 2189056.4015151514
[2025-07-27 23:10:17] 2025-07-28 03:09:43,590 | INFO     | -- intersect: 4290350613.3406186
[2025-07-27 23:10:17] 2025-07-28 03:09:43,590 | INFO     | intersect: 4290350613.3406186
[2025-07-27 23:10:17] 2025-07-28 03:09:43,590 | INFO     | chi2: 0.1260964440977522
[2025-07-27 23:10:17] 2025-07-28 03:09:43,590 | INFO     | current chi2=0.1260964440977522 (change=92.94357236524151 %)
[2025-07-27 23:10:17] 2025-07-28 03:09:43,591 | INFO     | sum of square deviations: 635123948.9921248
[2025-07-27 23:10:17] 2025-07-28 03:09:43,591 | INFO     | sum of deviations: -2806756867.8661447
[2025-07-27 23:10:17] 2025-07-28 03:09:43,591 | INFO     | mean x: 1753668290.007874
[2025-07-27 23:10:17] 2025-07-28 03:09:43,591 | INFO     | mean y: 2191053.8661417323
[2025-07-27 23:10:17] 2025-07-28 03:09:43,592 | INFO     | -- intersect: 7752049211.080285
[2025-07-27 23:10:17] 2025-07-28 03:09:43,592 | INFO     | intersect: 7752049211.080285
[2025-07-27 23:10:17] 2025-07-28 03:09:43,592 | INFO     | chi2: 0.10552169688640593
[2025-07-27 23:10:17] 2025-07-28 03:09:43,592 | INFO     | current chi2=0.10552169688640593 (change=16.31667519140853 %)
[2025-07-27 23:10:17] 2025-07-28 03:09:43,592 | INFO     | left removable region: 20
[2025-07-27 23:10:17] 2025-07-28 03:09:43,592 | INFO     | sum of square deviations: 424038816.9909904
[2025-07-27 23:10:17] 2025-07-28 03:09:43,593 | INFO     | sum of deviations: -180245664.31531584
[2025-07-27 23:10:17] 2025-07-28 03:09:43,593 | INFO     | mean x: 1753668412.0090091
[2025-07-27 23:10:17] 2025-07-28 03:09:43,593 | INFO     | mean y: 2183568.3153153155
[2025-07-27 23:10:17] 2025-07-28 03:09:43,593 | INFO     | -- intersect: 747613267.7809303
[2025-07-27 23:10:17] 2025-07-28 03:09:43,593 | INFO     | intersect: 747613267.7809303
[2025-07-27 23:10:17] 2025-07-28 03:09:43,593 | INFO     | chi2: 0.08838143141234017
[2025-07-27 23:10:17] 2025-07-28 03:09:43,594 | INFO     | -- intersect: 747613267.7809303
[2025-07-27 23:10:17] 2025-07-28 03:09:43,594 | INFO     | current memory leak: -0.43 B/s (using 111 data points, chi2=0.09)
[2025-07-27 23:10:17] 2025-07-28 03:09:43,594 | INFO     | could have reported an average CPU frequency of 2968 MHz (8 samples)
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | ..............................
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . Timing measurements:
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . get job = 0 s
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . initial setup = 3 s
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . payload setup = 13 s
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . stage-in = 0 s
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . payload execution = 8342 s
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . stage-out = 0 s
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | . log creation = 0 s
[2025-07-27 23:10:17] 2025-07-28 03:09:43,595 | INFO     | ..............................
[2025-07-27 23:10:17] 2025-07-28 03:09:43,943 | INFO     | PID=4078729 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 23:10:17] 2025-07-28 03:09:43,943 | INFO     | .. there are 15 such processes running
[2025-07-27 23:10:17] 2025-07-28 03:09:44,081 | INFO     | 
[2025-07-27 23:10:17] 2025-07-28 03:09:44,081 | INFO     | job summary report
[2025-07-27 23:10:17] 2025-07-28 03:09:44,081 | INFO     | --------------------------------------------------
[2025-07-27 23:10:17] 2025-07-28 03:09:44,081 | INFO     | PanDA job id: 6747626235
[2025-07-27 23:10:17] 2025-07-28 03:09:44,081 | INFO     | task id: 45743349
[2025-07-27 23:10:17] 2025-07-28 03:09:44,081 | INFO     | errors: (none)
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | pilot state: finished 
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | transexitcode: 0
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | exeerrorcode: 0
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | exeerrordiag: 
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | exitcode: 0
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | exitmsg: OK
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | cpuconsumptiontime: 39378 s
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | nevents: 400
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | neventsw: 0
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | pid: 4093989
[2025-07-27 23:10:17] 2025-07-28 03:09:44,082 | INFO     | pgrp: 4093989
[2025-07-27 23:10:17] 2025-07-28 03:09:44,083 | INFO     | corecount: 8
[2025-07-27 23:10:17] 2025-07-28 03:09:44,083 | INFO     | event service: False
[2025-07-27 23:10:17] 2025-07-28 03:09:44,083 | INFO     | sizes: {0: 2397248, 1: 2397503, 9: 2397765, 12: 2397793, 8359: 2425822, 8360: 2425821, 8361: 2435059, 8369: 2435197}
[2025-07-27 23:10:17] 2025-07-28 03:09:44,083 | INFO     | --------------------------------------------------
[2025-07-27 23:10:17] 2025-07-28 03:09:44,083 | INFO     | 
[2025-07-27 23:10:17] 2025-07-28 03:09:44,083 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:10:17] 2025-07-28 03:09:44,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | job 6747626235 has completed (purged errors)
[2025-07-27 23:10:17] 2025-07-28 03:09:44,117 | INFO     | overall cleanup function is called
[2025-07-27 23:10:17] 2025-07-28 03:09:45,126 | INFO     | --- collectZombieJob: --- 10, [4093989]
[2025-07-27 23:10:17] 2025-07-28 03:09:45,126 | INFO     | zombie collector waiting for pid 4093989
[2025-07-27 23:10:17] 2025-07-28 03:09:45,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:10:17] 2025-07-28 03:09:45,126 | INFO     | collected zombie processes
[2025-07-27 23:10:17] 2025-07-28 03:09:45,126 | INFO     | will attempt to kill all subprocesses of pid=4093989
[2025-07-27 23:10:17] 2025-07-28 03:09:45,741 | INFO     | process IDs to be killed: [4093989] (in reverse order)
[2025-07-27 23:10:17] 2025-07-28 03:09:45,894 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:10:17] 2025-07-28 03:09:45,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:10:17] 2025-07-28 03:09:45,917 | INFO     | did not find any defunct processes belonging to 4093989
[2025-07-27 23:10:17] 2025-07-28 03:09:45,938 | INFO     | did not find any defunct processes belonging to 4093989
[2025-07-27 23:10:17] 2025-07-28 03:09:45,939 | INFO     | ready for new job
[2025-07-27 23:10:17] 2025-07-28 03:09:45,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:10:17] 2025-07-28 03:09:45,941 | INFO     | ***************************************
[2025-07-27 23:10:17] 2025-07-28 03:09:45,942 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:10:17] 2025-07-28 03:09:45,942 | INFO     | ***************************************
[2025-07-27 23:10:17] 2025-07-28 03:09:45,942 | INFO     | 
[2025-07-27 23:10:17] 2025-07-28 03:09:45,961 | INFO     | architecture information:
[2025-07-27 23:10:17] 2025-07-28 03:09:45,963 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:10:17] 2025-07-28 03:09:45,986 | INFO     | cat /etc/os-release:
[2025-07-27 23:10:17] NAME="CentOS Linux"
[2025-07-27 23:10:17] VERSION="7 (Core)"
[2025-07-27 23:10:17] ID="centos"
[2025-07-27 23:10:17] ID_LIKE="rhel fedora"
[2025-07-27 23:10:17] VERSION_ID="7"
[2025-07-27 23:10:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:10:17] ANSI_COLOR="0;31"
[2025-07-27 23:10:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:10:17] HOME_URL="https://www.centos.org/"
[2025-07-27 23:10:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:10:17] 
[2025-07-27 23:10:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:10:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:10:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:10:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:10:17] 
[2025-07-27 23:10:17] 2025-07-28 03:09:45,986 | INFO     | ***************************************
[2025-07-27 23:10:17] 2025-07-28 03:09:46,490 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:10:17] 2025-07-28 03:09:46,516 | INFO     | sufficient remaining disk space (75553046528 B)
[2025-07-27 23:10:17] 2025-07-28 03:09:46,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:10:17] 2025-07-28 03:09:46,517 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:10:17] 2025-07-28 03:09:46,517 | INFO     | update_server=False
[2025-07-27 23:10:17] 2025-07-28 03:09:46,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:10:17] 2025-07-28 03:09:46,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:10:17] 2025-07-28 03:09:46,832 | INFO     | all payload control threads have been joined
[2025-07-27 23:10:17] 2025-07-28 03:09:46,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:10:17] 2025-07-28 03:09:46,921 | INFO     | aborting loop
[2025-07-27 23:10:17] 2025-07-28 03:09:47,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:10:17] 2025-07-28 03:09:47,104 | INFO     | all data control threads have been joined
[2025-07-27 23:10:17] 2025-07-28 03:09:47,523 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:47,546 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:47,548 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:47,561 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:47,565 | INFO     | [job] validate thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:47,661 | INFO     | all job control threads have been joined
[2025-07-27 23:10:17] 2025-07-28 03:09:47,838 | INFO     | [payload] control thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:47,926 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:47,963 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:48,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:48,110 | INFO     | [data] control thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:48,561 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:48,599 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:48,666 | INFO     | [job] control thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:48,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:10:17] 2025-07-28 03:09:48,969 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:49,731 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:51,078 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:10:17] 2025-07-28 03:09:51,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837679331136)>', '<ExcThread(monitor, started 139836887398144)>']
[2025-07-27 23:10:17] 2025-07-28 03:09:56,394 | INFO     | all workflow threads have been joined
[2025-07-27 23:10:17] 2025-07-28 03:09:56,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:10:17] 2025-07-28 03:09:56,394 | INFO     | traces error code: 0
[2025-07-27 23:10:17] 2025-07-28 03:09:56,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:10:17] 2025-07-28 03:10:16,665 | INFO     | PID=4078729 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:10:17] 2025-07-28 03:10:16,665 | INFO     | .. there are 15 such processes running
[2025-07-27 23:10:17] 2025-07-28 03:10:16,666 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:10:17] 2025-07-28 03:10:16,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:10:17] 2025-07-28 03:10:16,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:10:17] 2025-07-28 03:10:16,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:10:17] 2025-07-28 03:10:16,666 | INFO     | [monitor] control thread has ended
[2025-07-27 23:10:17] 2025-07-28 03:10:16,833 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:10:17] 2025-07-28 03:10:16,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:10:17] 2025-07-28 03:10:16,841 [wrapper] pilotpid: 4078729
[2025-07-27 23:10:17] 2025-07-28 03:10:16,845 [wrapper] Pilot exit status: 0
[2025-07-27 23:10:17] 2025-07-28 03:10:16,865 [wrapper] pandaids: 6747626235
[2025-07-27 23:10:17] 2025-07-28 03:10:16,982 [wrapper] cleanup supervisor_pilot  550711 4078730
[2025-07-27 23:10:17] 2025-07-28 03:10:16,986 [wrapper] Test setup, not cleaning
[2025-07-27 23:10:17] 2025-07-28 03:10:16,990 [wrapper] apfmon messages muted
[2025-07-27 23:10:17] 2025-07-28 03:10:16,998 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:10:17] 2025-07-28 03:10:17,004 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:10:17]  *** Error codes and diagnostics ***
[2025-07-27 23:10:17]     "exeErrorCode": 0,
[2025-07-27 23:10:17]     "exeErrorDiag": "",
[2025-07-27 23:10:17]     "pilotErrorCode": 0,
[2025-07-27 23:10:17]     "pilotErrorDiag": "",
[2025-07-27 23:10:17]  *** Listing of results directory ***
[2025-07-27 23:10:17] total 437692
[2025-07-27 23:10:17] -rwx------. 1 boincer umatlas     36292 Jul 27 15:12 runpilot2-wrapper.sh
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:12 queuedata.json
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:10:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:49 run_atlas
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:49 job.xml
[2025-07-27 23:10:17] -rw-r--r--. 2 boincer umatlas 233704170 Jul 27 20:49 EVNT.45743347._002944.pool.root.1
[2025-07-27 23:10:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:49 start_atlas.sh
[2025-07-27 23:10:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:49 shared
[2025-07-27 23:10:17] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 20:49 input.tar.gz
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:49 boinc_lockfile
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 20:49 pandaJob.out
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas    980125 Jul 27 20:49 agis_schedconf.cvmfs.json
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:49 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:10:17] drwx------. 4 boincer umatlas      4096 Jul 27 20:49 pilot3
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas      6932 Jul 27 23:00 init_data.xml
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas 208383304 Jul 27 23:09 HITS.45743349._054337.pool.root.1
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas       530 Jul 27 23:09 boinc_task_state.xml
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas        95 Jul 27 23:09 pilot_heartbeat.json
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas      1043 Jul 27 23:09 memory_monitor_summary.json
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas    348603 Jul 27 23:09 log.45743349._054337.job.log.tgz.1
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas      7793 Jul 27 23:09 heartbeat.json
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:10 boinc_mmap_file
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:10 wrapper_checkpoint.txt
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas       823 Jul 27 23:10 pilotlog.txt
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas    765166 Jul 27 23:10 log.45743349._054337.job.log.1
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas       357 Jul 27 23:10 output.list
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:10 runtime_log
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas   1136640 Jul 27 23:10 result.tar.gz
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 23:10 runtime_log.err
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas       655 Jul 27 23:10 1atKDmqyL07n9Rq4apOajLDm4fhM0noT9bVof3QYDmiz2KDmR37lCn.diag
[2025-07-27 23:10:17] -rw-r--r--. 1 boincer umatlas     21315 Jul 27 23:10 stderr.txt
[2025-07-27 23:10:17] HITS file was successfully produced:
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas 208383304 Jul 27 23:09 shared/HITS.pool.root.1
[2025-07-27 23:10:17]  *** Contents of shared directory: ***
[2025-07-27 23:10:17] total 433396
[2025-07-27 23:10:17] -rw-r--r--. 2 boincer umatlas 233704170 Jul 27 20:49 ATLAS.root_0
[2025-07-27 23:10:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:49 start_atlas.sh
[2025-07-27 23:10:17] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 20:49 input.tar.gz
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas 208383304 Jul 27 23:09 HITS.pool.root.1
[2025-07-27 23:10:17] -rw-------. 1 boincer umatlas   1136640 Jul 27 23:10 result.tar.gz
23:10:19 (4072545): run_atlas exited; CPU time 39632.768150
23:10:19 (4072545): called boinc_finish(0)

</stderr_txt>
]]>

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