Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:31:29 (911696): wrapper (7.7.26015): starting
20:31:29 (911696): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:31:29] Arguments: --nthreads 8
[2025-07-27 20:31:29] Threads: 8
[2025-07-27 20:31:29] Checking for CVMFS
[2025-07-27 20:31:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:31:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:31:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:31:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:31:29] 2.13.1.0 675479 14882 212820 148829 3 65 21202720 40960001 15318 16776704 0 39725867 99.866 27591620 51685 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:31:29] CVMFS is ok
[2025-07-27 20:31:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:31:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:31:29] Further information can be found at the LHC@home message board.
[2025-07-27 20:31:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:31:29] Checking for apptainer binary...
[2025-07-27 20:31:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:31:29] Running /usr/bin/apptainer --version
[2025-07-27 20:31:29] apptainer version 1.4.1-1.el9
[2025-07-27 20:31:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:31:29] c-212-11.aglt2.org
[2025-07-27 20:31:29] apptainer works
[2025-07-27 20:31:29] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:31:29] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:31:29] Starting ATLAS job with PandaID=6747599835
[2025-07-27 20:31:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:02:07]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:02:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 22:02:07]  replicas=None
[2025-07-27 22:02:07]  scope=mc23_13p6TeV
[2025-07-27 22:02:07]  status=None
[2025-07-27 22:02:07]  status_code=0
[2025-07-27 22:02:07]  storage_token=
[2025-07-27 22:02:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747599835/log.45743349._054218.job.log.tgz.1
[2025-07-27 22:02:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/8c/log.45743349._054218.job.log.tgz.1
[2025-07-27 22:02:07]  workdir=None
[2025-07-27 22:02:07] ]
[2025-07-27 22:02:07] 2025-07-28 02:01:22,683 | INFO     | transferring file log.45743349._054218.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747599835/log.45743349._054218.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 22:02:07] 2025-07-28 02:01:22,683 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747599835/log.45743349._054218.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._054218.job
[2025-07-27 22:02:07] 2025-07-28 02:01:22,703 | INFO     | adding to output.list: log.45743349._054218.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/8c/log.45743349._054218.job.log.tg
[2025-07-27 22:02:07] 2025-07-28 02:01:22,704 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:02:07] 2025-07-28 02:01:22,704 | INFO     | summary of transferred files:
[2025-07-27 22:02:07] 2025-07-28 02:01:22,704 | INFO     |  -- lfn=log.45743349._054218.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:02:07] 2025-07-28 02:01:22,704 | INFO     | stage-out finished correctly
[2025-07-27 22:02:07] 2025-07-28 02:01:24,515 | INFO     | monitor loop #390: job 0:6747599835 is in state 'finished'
[2025-07-27 22:02:07] 2025-07-28 02:01:24,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:02:07] 2025-07-28 02:01:25,166 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:02:07] 2025-07-28 02:01:27,018 | INFO     | monitor loop #391: job 0:6747599835 is in state 'finished'
[2025-07-27 22:02:07] 2025-07-28 02:01:27,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:02:07] 2025-07-28 02:01:28,029 | INFO     | job 6747599835 has state=finished
[2025-07-27 22:02:07] 2025-07-28 02:01:28,029 | INFO     | preparing for final server update for job 6747599835 in state='finished'
[2025-07-27 22:02:07] 2025-07-28 02:01:28,030 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:02:07] 2025-07-28 02:01:28,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:02:07] 2025-07-28 02:01:28,030 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:02:07] 2025-07-28 02:01:28,030 | INFO     | job 6747599835 has finished - writing final server update
[2025-07-27 22:02:07] 2025-07-28 02:01:28,030 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:02:07] 2025-07-28 02:01:28,031 | INFO     | executing command: lscpu
[2025-07-27 22:02:07] 2025-07-28 02:01:28,089 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:02:07] 2025-07-28 02:01:29,521 | INFO     | monitor loop #392: job 0:6747599835 is in state 'finished'
[2025-07-27 22:02:07] 2025-07-28 02:01:29,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:02:07] 2025-07-28 02:01:32,024 | INFO     | monitor loop #393: job 0:6747599835 is in state 'finished'
[2025-07-27 22:02:07] 2025-07-28 02:01:32,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:02:07] 2025-07-28 02:01:33,824 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:02:07] 2025-07-28 02:01:33,830 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2940.182822916666
[2025-07-27 22:02:07] 2025-07-28 02:01:33,845 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747599835/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:02:07] 2025-07-28 02:01:33,846 | INFO     | extracted standard info from prmon json
[2025-07-27 22:02:07] 2025-07-28 02:01:33,846 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:02:07] 2025-07-28 02:01:33,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:02:07] 2025-07-28 02:01:33,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:02:07] 2025-07-28 02:01:33,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:02:07] 2025-07-28 02:01:33,849 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:02:07] 2025-07-28 02:01:33,849 | INFO     | sum of square deviations: 164765880.0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,849 | INFO     | sum of deviations: -15494047275.0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,849 | INFO     | mean x: 1753665479.0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,849 | INFO     | mean y: 2670447.864197531
[2025-07-27 22:02:07] 2025-07-28 02:01:33,850 | INFO     | -- intersect: 164911666389.02338
[2025-07-27 22:02:07] 2025-07-28 02:01:33,850 | INFO     | intersect: 164911666389.02338
[2025-07-27 22:02:07] 2025-07-28 02:01:33,850 | INFO     | chi2: 0.08623118427881993
[2025-07-27 22:02:07] 2025-07-28 02:01:33,850 | INFO     | -- intersect: 164911666389.02338
[2025-07-27 22:02:07] 2025-07-28 02:01:33,850 | INFO     | current memory leak: -94.04 B/s (using 81 data points, chi2=0.09)
[2025-07-27 22:02:07] 2025-07-28 02:01:33,850 | INFO     | could have reported an average CPU frequency of 2923 MHz (6 samples)
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | ..............................
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . Timing measurements:
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . get job = 0 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . initial setup = 2 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . payload setup = 9 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . stage-in = 0 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . payload execution = 5349 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . stage-out = 1 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | . log creation = 0 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,851 | INFO     | ..............................
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | 
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | job summary report
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | --------------------------------------------------
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | PanDA job id: 6747599835
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | task id: 45743349
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | errors: (none)
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | pilot state: finished 
[2025-07-27 22:02:07] 2025-07-28 02:01:33,926 | INFO     | transexitcode: 0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | exeerrorcode: 0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | exeerrordiag: 
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | exitcode: 0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | exitmsg: OK
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | cpuconsumptiontime: 38627 s
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | nevents: 400
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | neventsw: 0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | pid: 922829
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | pgrp: 922829
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | corecount: 8
[2025-07-27 22:02:07] 2025-07-28 02:01:33,927 | INFO     | event service: False
[2025-07-27 22:02:07] 2025-07-28 02:01:33,928 | INFO     | sizes: {0: 2397302, 1: 2397501, 6: 2397763, 11: 2397791, 5363: 2424194, 5364: 2433192, 5366: 2433376, 5375: 2433570}
[2025-07-27 22:02:07] 2025-07-28 02:01:33,928 | INFO     | --------------------------------------------------
[2025-07-27 22:02:07] 2025-07-28 02:01:33,928 | INFO     | 
[2025-07-27 22:02:07] 2025-07-28 02:01:33,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:02:07] 2025-07-28 02:01:33,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,950 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:02:07] 2025-07-28 02:01:33,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:02:07] 2025-07-28 02:01:33,950 | INFO     | job 6747599835 has completed (purged errors)
[2025-07-27 22:02:07] 2025-07-28 02:01:33,950 | INFO     | overall cleanup function is called
[2025-07-27 22:02:07] 2025-07-28 02:01:34,958 | INFO     | --- collectZombieJob: --- 10, [922829]
[2025-07-27 22:02:07] 2025-07-28 02:01:34,958 | INFO     | zombie collector waiting for pid 922829
[2025-07-27 22:02:07] 2025-07-28 02:01:34,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:02:07] 2025-07-28 02:01:34,958 | INFO     | collected zombie processes
[2025-07-27 22:02:07] 2025-07-28 02:01:34,958 | INFO     | will attempt to kill all subprocesses of pid=922829
[2025-07-27 22:02:07] 2025-07-28 02:01:35,274 | INFO     | process IDs to be killed: [922829] (in reverse order)
[2025-07-27 22:02:07] 2025-07-28 02:01:35,399 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:02:07] 2025-07-28 02:01:35,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:02:07] 2025-07-28 02:01:35,415 | INFO     | did not find any defunct processes belonging to 922829
[2025-07-27 22:02:07] 2025-07-28 02:01:35,425 | INFO     | did not find any defunct processes belonging to 922829
[2025-07-27 22:02:07] 2025-07-28 02:01:35,425 | INFO     | ready for new job
[2025-07-27 22:02:07] 2025-07-28 02:01:35,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:02:07] 2025-07-28 02:01:35,426 | INFO     | ***************************************
[2025-07-27 22:02:07] 2025-07-28 02:01:35,428 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:02:07] 2025-07-28 02:01:35,428 | INFO     | ***************************************
[2025-07-27 22:02:07] 2025-07-28 02:01:35,428 | INFO     | 
[2025-07-27 22:02:07] 2025-07-28 02:01:35,432 | INFO     | architecture information:
[2025-07-27 22:02:07] 2025-07-28 02:01:35,433 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:02:07] 2025-07-28 02:01:35,453 | INFO     | cat /etc/os-release:
[2025-07-27 22:02:07] NAME="CentOS Linux"
[2025-07-27 22:02:07] VERSION="7 (Core)"
[2025-07-27 22:02:07] ID="centos"
[2025-07-27 22:02:07] ID_LIKE="rhel fedora"
[2025-07-27 22:02:07] VERSION_ID="7"
[2025-07-27 22:02:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:02:07] ANSI_COLOR="0;31"
[2025-07-27 22:02:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:02:07] HOME_URL="https://www.centos.org/"
[2025-07-27 22:02:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:02:07] 
[2025-07-27 22:02:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:02:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:02:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:02:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:02:07] 
[2025-07-27 22:02:07] 2025-07-28 02:01:35,454 | INFO     | ***************************************
[2025-07-27 22:02:07] 2025-07-28 02:01:35,956 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:02:07] 2025-07-28 02:01:35,980 | INFO     | sufficient remaining disk space (128778764288 B)
[2025-07-27 22:02:07] 2025-07-28 02:01:35,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:02:07] 2025-07-28 02:01:35,980 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:02:07] 2025-07-28 02:01:35,980 | INFO     | update_server=False
[2025-07-27 22:02:07] 2025-07-28 02:01:35,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:02:07] 2025-07-28 02:01:35,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:02:07] 2025-07-28 02:01:35,981 | INFO     | aborting loop
[2025-07-27 22:02:07] 2025-07-28 02:01:35,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:02:07] 2025-07-28 02:01:35,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:02:07] 2025-07-28 02:01:36,192 | INFO     | all job control threads have been joined
[2025-07-27 22:02:07] 2025-07-28 02:01:36,300 | INFO     | all data control threads have been joined
[2025-07-27 22:02:07] 2025-07-28 02:01:36,399 | INFO     | all payload control threads have been joined
[2025-07-27 22:02:07] 2025-07-28 02:01:36,985 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:36,986 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,096 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,197 | INFO     | [job] control thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,306 | INFO     | [data] control thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,404 | INFO     | [payload] control thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,441 | INFO     | [job] validate thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,622 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,772 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,912 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,915 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:37,986 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:38,414 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:38,924 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-27 22:02:07] 2025-07-28 02:01:38,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:02:07] 2025-07-28 02:01:39,941 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:39,982 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:46,366 | INFO     | job.realtimelogging is not enabled
[2025-07-27 22:02:07] 2025-07-28 02:01:47,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:02:07] 2025-07-28 02:01:48,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699852867392)>', '<ExcThread(monitor, started 139699347764992)>']
[2025-07-27 22:02:07] 2025-07-28 02:01:53,434 | INFO     | all workflow threads have been joined
[2025-07-27 22:02:07] 2025-07-28 02:01:53,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:02:07] 2025-07-28 02:01:53,434 | INFO     | traces error code: 0
[2025-07-27 22:02:07] 2025-07-28 02:01:53,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:02:07] 2025-07-28 02:02:06,964 | INFO     | PID=915274 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 22:02:07] 2025-07-28 02:02:06,964 | INFO     | .. there are 15 such processes running
[2025-07-27 22:02:07] 2025-07-28 02:02:06,965 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:02:07] 2025-07-28 02:02:06,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:02:07] 2025-07-28 02:02:06,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:02:07] 2025-07-28 02:02:06,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:02:07] 2025-07-28 02:02:06,965 | INFO     | [monitor] control thread has ended
[2025-07-27 22:02:07] 2025-07-28 02:02:07,079 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:02:07] 2025-07-28 02:02:07,082 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:02:07] 2025-07-28 02:02:07,086 [wrapper] pilotpid: 915274
[2025-07-27 22:02:07] 2025-07-28 02:02:07,092 [wrapper] Pilot exit status: 0
[2025-07-27 22:02:07] 2025-07-28 02:02:07,112 [wrapper] pandaids: 6747599835
[2025-07-27 22:02:07] 2025-07-28 02:02:07,210 [wrapper] cleanup supervisor_pilot 1087605 915275
[2025-07-27 22:02:07] 2025-07-28 02:02:07,215 [wrapper] Test setup, not cleaning
[2025-07-27 22:02:07] 2025-07-28 02:02:07,218 [wrapper] apfmon messages muted
[2025-07-27 22:02:07] 2025-07-28 02:02:07,221 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:02:07] 2025-07-28 02:02:07,225 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:02:07]  *** Error codes and diagnostics ***
[2025-07-27 22:02:07]     "exeErrorCode": 0,
[2025-07-27 22:02:07]     "exeErrorDiag": "",
[2025-07-27 22:02:07]     "pilotErrorCode": 0,
[2025-07-27 22:02:07]     "pilotErrorDiag": "",
[2025-07-27 22:02:07]  *** Listing of results directory ***
[2025-07-27 22:02:07] total 356928
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:41 pilot3.tar.gz
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:10 queuedata.json
[2025-07-27 22:02:07] -rwx------. 1 boincer umatlas     36292 Jul 27 15:11 runpilot2-wrapper.sh
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:02:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:31 run_atlas
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:31 job.xml
[2025-07-27 22:02:07] -rw-r--r--. 2 boincer umatlas 147373886 Jul 27 20:31 EVNT.45743347._002899.pool.root.1
[2025-07-27 22:02:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:31 start_atlas.sh
[2025-07-27 22:02:07] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:31 shared
[2025-07-27 22:02:07] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 20:31 input.tar.gz
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:31 boinc_lockfile
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 20:31 pandaJob.out
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas    980125 Jul 27 20:31 agis_schedconf.cvmfs.json
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:31 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:02:07] drwx------. 4 boincer umatlas      4096 Jul 27 20:31 pilot3
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 22:00 init_data.xml
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas 212609055 Jul 27 22:00 HITS.45743349._054218.pool.root.1
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas       530 Jul 27 22:00 boinc_task_state.xml
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas      1036 Jul 27 22:01 memory_monitor_summary.json
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas    300310 Jul 27 22:01 log.45743349._054218.job.log.tgz.1
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas      7778 Jul 27 22:01 heartbeat.json
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:02 boinc_mmap_file
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:02 wrapper_checkpoint.txt
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas        95 Jul 27 22:02 pilot_heartbeat.json
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas       822 Jul 27 22:02 pilotlog.txt
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas    516484 Jul 27 22:02 log.45743349._054218.job.log.1
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas       357 Jul 27 22:02 output.list
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:02 runtime_log
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas    839680 Jul 27 22:02 result.tar.gz
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas       652 Jul 27 22:02 UHpNDmvxL07n9Rq4apOajLDm4fhM0noT9bVof3QYDm8y2KDmWPI2zm.diag
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 22:02 runtime_log.err
[2025-07-27 22:02:07] -rw-r--r--. 1 boincer umatlas     21880 Jul 27 22:02 stderr.txt
[2025-07-27 22:02:07] HITS file was successfully produced:
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas 212609055 Jul 27 22:00 shared/HITS.pool.root.1
[2025-07-27 22:02:07]  *** Contents of shared directory: ***
[2025-07-27 22:02:07] total 352920
[2025-07-27 22:02:07] -rw-r--r--. 2 boincer umatlas 147373886 Jul 27 20:31 ATLAS.root_0
[2025-07-27 22:02:07] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:31 start_atlas.sh
[2025-07-27 22:02:07] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 20:31 input.tar.gz
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas 212609055 Jul 27 22:00 HITS.pool.root.1
[2025-07-27 22:02:07] -rw-------. 1 boincer umatlas    839680 Jul 27 22:02 result.tar.gz
22:02:09 (911696): run_atlas exited; CPU time 38796.548710
22:02:09 (911696): called boinc_finish(0)

</stderr_txt>
]]>

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