Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:22:45 (784577): wrapper (7.7.26015): starting
20:22:45 (784577): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:22:45] Arguments: --nthreads 8
[2025-07-27 20:22:45] Threads: 8
[2025-07-27 20:22:45] Checking for CVMFS
[2025-07-27 20:22:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:22:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:22:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:22:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:22:46] 2.13.1.0 5054 2654 133756 148829 1 64 25926953 40960001 12359 16776704 0 7337388 99.754 5134836 43752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:22:46] CVMFS is ok
[2025-07-27 20:22:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:22:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:22:46] Further information can be found at the LHC@home message board.
[2025-07-27 20:22:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:22:46] Checking for apptainer binary...
[2025-07-27 20:22:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:22:46] Running /usr/bin/apptainer --version
[2025-07-27 20:22:46] apptainer version 1.4.1-1.el9
[2025-07-27 20:22:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:22:46] c-206-38.aglt2.org
[2025-07-27 20:22:46] apptainer works
[2025-07-27 20:22:46] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:22:46] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:22:46] Starting ATLAS job with PandaID=6747626304
[2025-07-27 20:22:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:10:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:10:01] 2025-07-28 02:09:28,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:10:01] 2025-07-28 02:09:28,844 | INFO     | PID=788155 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 22:10:01] 2025-07-28 02:09:28,844 | INFO     | .. there are 10 such processes running
[2025-07-27 22:10:01] 2025-07-28 02:09:29,343 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:10:01] 2025-07-28 02:09:29,347 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3210.6577968750003
[2025-07-27 22:10:01] 2025-07-28 02:09:29,357 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747626304/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,358 | INFO     | extracted standard info from prmon json
[2025-07-27 22:10:01] 2025-07-28 02:09:29,358 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:10:01] 2025-07-28 02:09:29,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:10:01] 2025-07-28 02:09:29,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:10:01] 2025-07-28 02:09:29,360 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:10:01] 2025-07-28 02:09:29,361 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:10:01] 2025-07-28 02:09:29,362 | INFO     | sum of square deviations: 348737078.9134616
[2025-07-27 22:10:01] 2025-07-28 02:09:29,362 | INFO     | sum of deviations: -15448748691.817307
[2025-07-27 22:10:01] 2025-07-28 02:09:29,362 | INFO     | mean x: 1753665367.7211537
[2025-07-27 22:10:01] 2025-07-28 02:09:29,362 | INFO     | mean y: 2717594.144230769
[2025-07-27 22:10:01] 2025-07-28 02:09:29,362 | INFO     | -- intersect: 77688565166.98088
[2025-07-27 22:10:01] 2025-07-28 02:09:29,362 | INFO     | intersect: 77688565166.98088
[2025-07-27 22:10:01] 2025-07-28 02:09:29,362 | INFO     | chi2: 1.5473248753180557
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | sum of square deviations: 300817613.6565662
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | sum of deviations: -12734012410.404036
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | mean x: 1753665215.2323232
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | mean y: 2726245.626262626
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | -- intersect: 74237723136.32387
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | intersect: 74237723136.32387
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | chi2: 1.5497780347341554
[2025-07-27 22:10:01] 2025-07-28 02:09:29,363 | INFO     | current chi2=1.5497780347341554 (change=-0.15854197494210392 %)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,364 | INFO     | right removable region: 98
[2025-07-27 22:10:01] 2025-07-28 02:09:29,364 | INFO     | sum of square deviations: 300809683.11111194
[2025-07-27 22:10:01] 2025-07-28 02:09:29,364 | INFO     | sum of deviations: -29366983697.444447
[2025-07-27 22:10:01] 2025-07-28 02:09:29,364 | INFO     | mean x: 1753665520.2222223
[2025-07-27 22:10:01] 2025-07-28 02:09:29,364 | INFO     | mean y: 2760605.111111111
[2025-07-27 22:10:01] 2025-07-28 02:09:29,364 | INFO     | -- intersect: 171206912713.85028
[2025-07-27 22:10:01] 2025-07-28 02:09:29,365 | INFO     | intersect: 171206912713.85028
[2025-07-27 22:10:01] 2025-07-28 02:09:29,366 | INFO     | chi2: 0.15369921132738387
[2025-07-27 22:10:01] 2025-07-28 02:09:29,366 | INFO     | current chi2=0.15369921132738387 (change=90.06677823260674 %)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,366 | INFO     | sum of square deviations: 257487146.8085106
[2025-07-27 22:10:01] 2025-07-28 02:09:29,366 | INFO     | sum of deviations: -27030504580.829796
[2025-07-27 22:10:01] 2025-07-28 02:09:29,366 | INFO     | mean x: 1753665672.7234042
[2025-07-27 22:10:01] 2025-07-28 02:09:29,366 | INFO     | mean y: 2752346.4680851065
[2025-07-27 22:10:01] 2025-07-28 02:09:29,366 | INFO     | -- intersect: 184099195945.0546
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | intersect: 184099195945.0546
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | chi2: 0.14226704448868915
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | current chi2=0.14226704448868915 (change=7.438012687224442 %)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | left removable region: 20
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | sum of square deviations: 147114902.21794853
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | sum of deviations: -18754913981.01282
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | mean x: 1753665794.7051282
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | mean y: 2743674.782051282
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | -- intersect: 223568477908.92065
[2025-07-27 22:10:01] 2025-07-28 02:09:29,367 | INFO     | intersect: 223568477908.92065
[2025-07-27 22:10:01] 2025-07-28 02:09:29,368 | INFO     | chi2: 0.12038101270457315
[2025-07-27 22:10:01] 2025-07-28 02:09:29,368 | INFO     | -- intersect: 223568477908.92065
[2025-07-27 22:10:01] 2025-07-28 02:09:29,368 | INFO     | current memory leak: -127.48 B/s (using 78 data points, chi2=0.12)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,368 | INFO     | could have reported an average CPU frequency of 3226 MHz (7 samples)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,368 | INFO     | ..............................
[2025-07-27 22:10:01] 2025-07-28 02:09:29,368 | INFO     | . Timing measurements:
[2025-07-27 22:10:01] 2025-07-28 02:09:29,368 | INFO     | . get job = 0 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,369 | INFO     | . initial setup = 2 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,369 | INFO     | . payload setup = 13 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,369 | INFO     | . stage-in = 0 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,369 | INFO     | . payload execution = 6333 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,369 | INFO     | . stage-out = 0 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,369 | INFO     | . log creation = 0 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,369 | INFO     | ..............................
[2025-07-27 22:10:01] 2025-07-28 02:09:29,496 | INFO     | 
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | job summary report
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | --------------------------------------------------
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | PanDA job id: 6747626304
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | task id: 45743349
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | errors: (none)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | pilot state: finished 
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | transexitcode: 0
[2025-07-27 22:10:01] 2025-07-28 02:09:29,497 | INFO     | exeerrorcode: 0
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | exeerrordiag: 
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | exitcode: 0
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | exitmsg: OK
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | cpuconsumptiontime: 38378 s
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | nevents: 400
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | neventsw: 0
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | pid: 794545
[2025-07-27 22:10:01] 2025-07-28 02:09:29,499 | INFO     | pgrp: 794545
[2025-07-27 22:10:01] 2025-07-28 02:09:29,500 | INFO     | corecount: 8
[2025-07-27 22:10:01] 2025-07-28 02:09:29,500 | INFO     | event service: False
[2025-07-27 22:10:01] 2025-07-28 02:09:29,500 | INFO     | sizes: {0: 2397304, 1: 2397503, 9: 2397765, 11: 2397793, 6351: 2424908, 6353: 2434090, 6365: 2434228}
[2025-07-27 22:10:01] 2025-07-28 02:09:29,500 | INFO     | --------------------------------------------------
[2025-07-27 22:10:01] 2025-07-28 02:09:29,500 | INFO     | 
[2025-07-27 22:10:01] 2025-07-28 02:09:29,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:10:01] 2025-07-28 02:09:29,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,549 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,549 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,549 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:10:01] 2025-07-28 02:09:29,550 | INFO     | job 6747626304 has completed (purged errors)
[2025-07-27 22:10:01] 2025-07-28 02:09:29,551 | INFO     | overall cleanup function is called
[2025-07-27 22:10:01] 2025-07-28 02:09:30,566 | INFO     | --- collectZombieJob: --- 10, [794545]
[2025-07-27 22:10:01] 2025-07-28 02:09:30,567 | INFO     | zombie collector waiting for pid 794545
[2025-07-27 22:10:01] 2025-07-28 02:09:30,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:10:01] 2025-07-28 02:09:30,567 | INFO     | collected zombie processes
[2025-07-27 22:10:01] 2025-07-28 02:09:30,567 | INFO     | will attempt to kill all subprocesses of pid=794545
[2025-07-27 22:10:01] 2025-07-28 02:09:30,842 | INFO     | process IDs to be killed: [794545] (in reverse order)
[2025-07-27 22:10:01] 2025-07-28 02:09:30,936 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:10:01] 2025-07-28 02:09:30,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:10:01] 2025-07-28 02:09:30,952 | INFO     | did not find any defunct processes belonging to 794545
[2025-07-27 22:10:01] 2025-07-28 02:09:30,967 | INFO     | did not find any defunct processes belonging to 794545
[2025-07-27 22:10:01] 2025-07-28 02:09:30,967 | INFO     | ready for new job
[2025-07-27 22:10:01] 2025-07-28 02:09:30,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:10:01] 2025-07-28 02:09:30,969 | INFO     | ***************************************
[2025-07-27 22:10:01] 2025-07-28 02:09:30,969 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:10:01] 2025-07-28 02:09:30,969 | INFO     | ***************************************
[2025-07-27 22:10:01] 2025-07-28 02:09:30,969 | INFO     | 
[2025-07-27 22:10:01] 2025-07-28 02:09:30,975 | INFO     | architecture information:
[2025-07-27 22:10:01] 2025-07-28 02:09:30,977 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:10:01] 2025-07-28 02:09:31,016 | INFO     | cat /etc/os-release:
[2025-07-27 22:10:01] NAME="CentOS Linux"
[2025-07-27 22:10:01] VERSION="7 (Core)"
[2025-07-27 22:10:01] ID="centos"
[2025-07-27 22:10:01] ID_LIKE="rhel fedora"
[2025-07-27 22:10:01] VERSION_ID="7"
[2025-07-27 22:10:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:10:01] ANSI_COLOR="0;31"
[2025-07-27 22:10:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:10:01] HOME_URL="https://www.centos.org/"
[2025-07-27 22:10:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:10:01] 
[2025-07-27 22:10:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:10:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:10:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:10:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:10:01] 
[2025-07-27 22:10:01] 2025-07-28 02:09:31,017 | INFO     | ***************************************
[2025-07-27 22:10:01] 2025-07-28 02:09:31,520 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:10:01] 2025-07-28 02:09:31,560 | INFO     | sufficient remaining disk space (86078652416 B)
[2025-07-27 22:10:01] 2025-07-28 02:09:31,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:10:01] 2025-07-28 02:09:31,561 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:10:01] 2025-07-28 02:09:31,561 | INFO     | update_server=False
[2025-07-27 22:10:01] 2025-07-28 02:09:31,561 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:10:01] 2025-07-28 02:09:32,066 | INFO     | all data control threads have been joined
[2025-07-27 22:10:01] 2025-07-28 02:09:32,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:10:01] 2025-07-28 02:09:32,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:10:01] 2025-07-28 02:09:32,282 | INFO     | aborting loop
[2025-07-27 22:10:01] 2025-07-28 02:09:32,291 | INFO     | all job control threads have been joined
[2025-07-27 22:10:01] 2025-07-28 02:09:32,566 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:32,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:10:01] 2025-07-28 02:09:32,678 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:32,756 | INFO     | all payload control threads have been joined
[2025-07-27 22:10:01] 2025-07-28 02:09:32,867 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:32,920 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,072 | INFO     | [data] control thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,089 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,288 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,296 | INFO     | [job] control thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,534 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,547 | INFO     | [job] validate thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,761 | INFO     | [payload] control thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:33,874 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:34,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:10:01] 2025-07-28 02:09:34,580 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:35,460 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:36,151 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:41,815 | INFO     | job.realtimelogging is not enabled
[2025-07-27 22:10:01] 2025-07-28 02:09:42,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:10:01] 2025-07-28 02:09:43,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269017098048)>', '<ExcThread(monitor, started 140268397393664)>']
[2025-07-27 22:10:01] 2025-07-28 02:09:48,399 | INFO     | all workflow threads have been joined
[2025-07-27 22:10:01] 2025-07-28 02:09:48,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:10:01] 2025-07-28 02:09:48,401 | INFO     | traces error code: 0
[2025-07-27 22:10:01] 2025-07-28 02:09:48,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:10:01] 2025-07-28 02:10:01,209 | INFO     | PID=788155 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 22:10:01] 2025-07-28 02:10:01,210 | INFO     | .. there are 10 such processes running
[2025-07-27 22:10:01] 2025-07-28 02:10:01,210 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:10:01] 2025-07-28 02:10:01,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:10:01] 2025-07-28 02:10:01,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:10:01] 2025-07-28 02:10:01,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:10:01] 2025-07-28 02:10:01,211 | INFO     | [monitor] control thread has ended
[2025-07-27 22:10:01] 2025-07-28 02:10:01,384 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:10:01] 2025-07-28 02:10:01,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:10:01] 2025-07-28 02:10:01,409 [wrapper] pilotpid: 788155
[2025-07-27 22:10:01] 2025-07-28 02:10:01,417 [wrapper] Pilot exit status: 0
[2025-07-27 22:10:01] 2025-07-28 02:10:01,451 [wrapper] pandaids: 6747626304
[2025-07-27 22:10:01] 2025-07-28 02:10:01,549 [wrapper] cleanup supervisor_pilot  930177 788156
[2025-07-27 22:10:01] 2025-07-28 02:10:01,555 [wrapper] Test setup, not cleaning
[2025-07-27 22:10:01] 2025-07-28 02:10:01,568 [wrapper] apfmon messages muted
[2025-07-27 22:10:01] 2025-07-28 02:10:01,581 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:10:01] 2025-07-28 02:10:01,592 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:10:01]  *** Error codes and diagnostics ***
[2025-07-27 22:10:01]     "exeErrorCode": 0,
[2025-07-27 22:10:01]     "exeErrorDiag": "",
[2025-07-27 22:10:01]     "pilotErrorCode": 0,
[2025-07-27 22:10:01]     "pilotErrorDiag": "",
[2025-07-27 22:10:01]  *** Listing of results directory ***
[2025-07-27 22:10:01] total 393248
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:12 pilot3.tar.gz
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:18 queuedata.json
[2025-07-27 22:10:01] -rwx------. 1 boincer umatlas     36292 Jul 27 15:18 runpilot2-wrapper.sh
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:10:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:22 run_atlas
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:22 job.xml
[2025-07-27 22:10:01] -rw-r--r--. 2 boincer umatlas 188095347 Jul 27 20:22 EVNT.45743347._002947.pool.root.1
[2025-07-27 22:10:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:22 start_atlas.sh
[2025-07-27 22:10:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:22 shared
[2025-07-27 22:10:01] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 20:22 input.tar.gz
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:22 boinc_lockfile
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 20:22 pandaJob.out
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas    980125 Jul 27 20:23 agis_schedconf.cvmfs.json
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:23 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:10:01] drwx------. 4 boincer umatlas      4096 Jul 27 20:23 pilot3
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas 208878184 Jul 27 22:08 HITS.45743349._054406.pool.root.1
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas       529 Jul 27 22:08 boinc_task_state.xml
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas      1027 Jul 27 22:09 memory_monitor_summary.json
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas    321680 Jul 27 22:09 log.45743349._054406.job.log.tgz.1
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas      7772 Jul 27 22:09 heartbeat.json
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas      6895 Jul 27 22:09 init_data.xml
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:09 boinc_mmap_file
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:09 wrapper_checkpoint.txt
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas       822 Jul 27 22:10 pilotlog.txt
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas        95 Jul 27 22:10 pilot_heartbeat.json
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas    597662 Jul 27 22:10 log.45743349._054406.job.log.1
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas       357 Jul 27 22:10 output.list
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:10 runtime_log
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas    942080 Jul 27 22:10 result.tar.gz
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas       653 Jul 27 22:10 spLMDm73L07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdCWLDmpucXBo.diag
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 22:10 runtime_log.err
[2025-07-27 22:10:01] -rw-r--r--. 1 boincer umatlas     21260 Jul 27 22:10 stderr.txt
[2025-07-27 22:10:01] HITS file was successfully produced:
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas 208878184 Jul 27 22:08 shared/HITS.pool.root.1
[2025-07-27 22:10:01]  *** Contents of shared directory: ***
[2025-07-27 22:10:01] total 389144
[2025-07-27 22:10:01] -rw-r--r--. 2 boincer umatlas 188095347 Jul 27 20:22 ATLAS.root_0
[2025-07-27 22:10:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:22 start_atlas.sh
[2025-07-27 22:10:01] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 20:22 input.tar.gz
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas 208878184 Jul 27 22:08 HITS.pool.root.1
[2025-07-27 22:10:01] -rw-------. 1 boincer umatlas    942080 Jul 27 22:10 result.tar.gz
22:10:03 (784577): run_atlas exited; CPU time 38384.359111
22:10:03 (784577): called boinc_finish(0)

</stderr_txt>
]]>

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