Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:30:33 (1076510): wrapper (7.7.26015): starting
23:30:33 (1076510): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 23:30:33] Arguments: --nthreads 12
[2025-07-28 23:30:33] Threads: 12
[2025-07-28 23:30:33] Checking for CVMFS
[2025-07-28 23:30:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 23:30:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 23:30:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 23:30:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 23:30:34] 2.13.1.0 4489 35085 114032 148865 2 56 42656719 46080001 922 130560 0 29140262 99.994 1102118 20963 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 23:30:34] CVMFS is ok
[2025-07-28 23:30:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 23:30:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 23:30:34] Further information can be found at the LHC@home message board.
[2025-07-28 23:30:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 23:30:34] Checking for apptainer binary...
[2025-07-28 23:30:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 23:30:34] Running /usr/bin/apptainer --version
[2025-07-28 23:30:34] apptainer version 1.4.1-1.el9
[2025-07-28 23:30:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 23:30:34] minis01.farm.particle.cz
[2025-07-28 23:30:34] apptainer works
[2025-07-28 23:30:34] Set ATHENA_PROC_NUMBER=12
[2025-07-28 23:30:34] Set ATHENA_CORE_NUMBER=12
[2025-07-28 23:30:34] Starting ATLAS job with PandaID=6747410646
[2025-07-28 23:30:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 00:29:53]  *** The last 200 lines of the pilot log: ***
[2025-07-29 00:29:53]  is_altstaged=None
[2025-07-29 00:29:53]  is_tar=False
[2025-07-29 00:29:53]  lfn=log.45743349._047927.job.log.tgz.1
[2025-07-29 00:29:53]  mtime=0
[2025-07-29 00:29:53]  protocol_id=None
[2025-07-29 00:29:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-29 00:29:53]  replicas=None
[2025-07-29 00:29:53]  scope=mc23_13p6TeV
[2025-07-29 00:29:53]  status=None
[2025-07-29 00:29:53]  status_code=0
[2025-07-29 00:29:53]  storage_token=
[2025-07-29 00:29:53]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6747410646/log.45743349._047927.job.log.tgz.1
[2025-07-29 00:29:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/c1/log.45743349._047927.job.log.tgz.1
[2025-07-29 00:29:53]  workdir=None
[2025-07-29 00:29:53] ]
[2025-07-29 00:29:53] 2025-07-28 22:29:15,955 | INFO     | transferring file log.45743349._047927.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6747410646/log.45743349._047927.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-29 00:29:53] 2025-07-28 22:29:15,955 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6747410646/log.45743349._047927.job.log.tgz.1 /scratch/.boinc/slots/1/log.45743349._047927.j
[2025-07-29 00:29:53] 2025-07-28 22:29:15,972 | INFO     | adding to output.list: log.45743349._047927.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/c1/log.45743349._047927.job.log.tg
[2025-07-29 00:29:53] 2025-07-28 22:29:15,972 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-29 00:29:53] 2025-07-28 22:29:15,973 | INFO     | summary of transferred files:
[2025-07-29 00:29:53] 2025-07-28 22:29:15,973 | INFO     |  -- lfn=log.45743349._047927.job.log.tgz.1, status_code=0, status=transferred
[2025-07-29 00:29:53] 2025-07-28 22:29:15,973 | INFO     | stage-out finished correctly
[2025-07-29 00:29:53] 2025-07-28 22:29:17,215 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-29 00:29:53] 2025-07-28 22:29:18,185 | INFO     | monitor loop #267: job 0:6747410646 is in state 'finished'
[2025-07-29 00:29:53] 2025-07-28 22:29:18,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 00:29:53] 2025-07-28 22:29:18,309 | INFO     | job 6747410646 has state=finished
[2025-07-29 00:29:53] 2025-07-28 22:29:18,309 | INFO     | preparing for final server update for job 6747410646 in state='finished'
[2025-07-29 00:29:53] 2025-07-28 22:29:18,309 | INFO     | this job has now completed (state=finished)
[2025-07-29 00:29:53] 2025-07-28 22:29:18,309 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-29 00:29:53] 2025-07-28 22:29:18,309 | INFO     | log transfer has been attempted: DONE
[2025-07-29 00:29:53] 2025-07-28 22:29:18,310 | INFO     | job 6747410646 has finished - writing final server update
[2025-07-29 00:29:53] 2025-07-28 22:29:18,310 | INFO     | total number of processed events: 400 (read)
[2025-07-29 00:29:53] 2025-07-28 22:29:18,310 | INFO     | executing command: lscpu
[2025-07-29 00:29:53] 2025-07-28 22:29:18,341 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-29 00:29:53] 2025-07-28 22:29:20,687 | INFO     | monitor loop #268: job 0:6747410646 is in state 'finished'
[2025-07-29 00:29:53] 2025-07-28 22:29:20,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 00:29:53] 2025-07-28 22:29:21,853 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-29 00:29:53] 2025-07-28 22:29:21,860 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2714.1953124999995
[2025-07-29 00:29:53] 2025-07-28 22:29:21,866 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6747410646/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 00:29:53] 2025-07-28 22:29:21,867 | INFO     | extracted standard info from prmon json
[2025-07-29 00:29:53] 2025-07-28 22:29:21,867 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 00:29:53] 2025-07-28 22:29:21,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 00:29:53] 2025-07-28 22:29:21,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 00:29:53] 2025-07-28 22:29:21,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 00:29:53] 2025-07-28 22:29:21,869 | INFO     | fitting pss+swap vs Time
[2025-07-29 00:29:53] 2025-07-28 22:29:21,870 | INFO     | sum of square deviations: 41117050.0
[2025-07-29 00:29:53] 2025-07-28 22:29:21,870 | INFO     | sum of deviations: -7854237.999999953
[2025-07-29 00:29:53] 2025-07-28 22:29:21,870 | INFO     | mean x: 1753740097.0
[2025-07-29 00:29:53] 2025-07-28 22:29:21,870 | INFO     | mean y: 2731412.254901961
[2025-07-29 00:29:53] 2025-07-28 22:29:21,870 | INFO     | -- intersect: 337733366.72344977
[2025-07-29 00:29:53] 2025-07-28 22:29:21,870 | INFO     | intersect: 337733366.72344977
[2025-07-29 00:29:53] 2025-07-28 22:29:21,871 | INFO     | chi2: 0.018141659937862025
[2025-07-29 00:29:53] 2025-07-28 22:29:21,871 | INFO     | -- intersect: 337733366.72344977
[2025-07-29 00:29:53] 2025-07-28 22:29:21,871 | INFO     | current memory leak: -0.19 B/s (using 51 data points, chi2=0.02)
[2025-07-29 00:29:53] 2025-07-28 22:29:21,871 | INFO     | could have reported an average CPU frequency of 2767 MHz (5 samples)
[2025-07-29 00:29:53] 2025-07-28 22:29:21,871 | INFO     | ..............................
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . Timing measurements:
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . get job = 0 s
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . initial setup = 1 s
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . payload setup = 5 s
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . stage-in = 0 s
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . payload execution = 3488 s
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . stage-out = 0 s
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | . log creation = 0 s
[2025-07-29 00:29:53] 2025-07-28 22:29:21,872 | INFO     | ..............................
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | 
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | job summary report
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | --------------------------------------------------
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | PanDA job id: 6747410646
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | task id: 45743349
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | errors: (none)
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | pilot state: finished 
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | transexitcode: 0
[2025-07-29 00:29:53] 2025-07-28 22:29:22,131 | INFO     | exeerrorcode: 0
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | exeerrordiag: 
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | exitcode: 0
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | exitmsg: OK
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | cpuconsumptiontime: 37477 s
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | nevents: 400
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | neventsw: 0
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | pid: 1087759
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | pgrp: 1087759
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | corecount: 12
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | event service: False
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | sizes: {0: 2391739, 1: 2391938, 4: 2392200, 11: 2392228, 3498: 2417917, 3499: 2426917, 3500: 2427101, 3505: 2427327}
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | --------------------------------------------------
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | 
[2025-07-29 00:29:53] 2025-07-28 22:29:22,132 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-07-29 00:29:53] 2025-07-28 22:29:22,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 00:29:53] 2025-07-28 22:29:22,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 00:29:53] 2025-07-28 22:29:22,150 | INFO     | job 6747410646 has completed (purged errors)
[2025-07-29 00:29:53] 2025-07-28 22:29:22,150 | INFO     | overall cleanup function is called
[2025-07-29 00:29:53] 2025-07-28 22:29:23,157 | INFO     | --- collectZombieJob: --- 10, [1087759]
[2025-07-29 00:29:53] 2025-07-28 22:29:23,157 | INFO     | zombie collector waiting for pid 1087759
[2025-07-29 00:29:53] 2025-07-28 22:29:23,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 00:29:53] 2025-07-28 22:29:23,157 | INFO     | collected zombie processes
[2025-07-29 00:29:53] 2025-07-28 22:29:23,157 | INFO     | will attempt to kill all subprocesses of pid=1087759
[2025-07-29 00:29:53] 2025-07-28 22:29:23,288 | INFO     | process IDs to be killed: [1087759] (in reverse order)
[2025-07-29 00:29:53] 2025-07-28 22:29:23,333 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 00:29:53] 2025-07-28 22:29:23,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 00:29:53] 2025-07-28 22:29:23,338 | INFO     | did not find any defunct processes belonging to 1087759
[2025-07-29 00:29:53] 2025-07-28 22:29:23,341 | INFO     | did not find any defunct processes belonging to 1087759
[2025-07-29 00:29:53] 2025-07-28 22:29:23,341 | INFO     | ready for new job
[2025-07-29 00:29:53] 2025-07-28 22:29:23,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 00:29:53] 2025-07-28 22:29:23,342 | INFO     | ***************************************
[2025-07-29 00:29:53] 2025-07-28 22:29:23,343 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 00:29:53] 2025-07-28 22:29:23,343 | INFO     | ***************************************
[2025-07-29 00:29:53] 2025-07-28 22:29:23,343 | INFO     | 
[2025-07-29 00:29:53] 2025-07-28 22:29:23,344 | INFO     | architecture information:
[2025-07-29 00:29:53] 2025-07-28 22:29:23,344 | INFO     | executing command: cat /etc/os-release
[2025-07-29 00:29:53] 2025-07-28 22:29:23,358 | INFO     | cat /etc/os-release:
[2025-07-29 00:29:53] NAME="CentOS Linux"
[2025-07-29 00:29:53] VERSION="7 (Core)"
[2025-07-29 00:29:53] ID="centos"
[2025-07-29 00:29:53] ID_LIKE="rhel fedora"
[2025-07-29 00:29:53] VERSION_ID="7"
[2025-07-29 00:29:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 00:29:53] ANSI_COLOR="0;31"
[2025-07-29 00:29:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 00:29:53] HOME_URL="https://www.centos.org/"
[2025-07-29 00:29:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 00:29:53] 
[2025-07-29 00:29:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 00:29:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 00:29:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 00:29:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 00:29:53] 
[2025-07-29 00:29:53] 2025-07-28 22:29:23,358 | INFO     | ***************************************
[2025-07-29 00:29:53] 2025-07-28 22:29:23,861 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-07-29 00:29:53] 2025-07-28 22:29:23,874 | INFO     | sufficient remaining disk space (715276681216 B)
[2025-07-29 00:29:53] 2025-07-28 22:29:23,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 00:29:53] 2025-07-28 22:29:23,875 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 00:29:53] 2025-07-28 22:29:23,875 | INFO     | update_server=False
[2025-07-29 00:29:53] 2025-07-28 22:29:23,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 00:29:53] 2025-07-28 22:29:23,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 00:29:53] 2025-07-28 22:29:23,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 00:29:53] 2025-07-28 22:29:24,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 00:29:53] 2025-07-28 22:29:24,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 00:29:53] 2025-07-28 22:29:24,196 | INFO     | aborting loop
[2025-07-29 00:29:53] 2025-07-28 22:29:24,206 | INFO     | all payload control threads have been joined
[2025-07-29 00:29:53] 2025-07-28 22:29:24,479 | INFO     | all data control threads have been joined
[2025-07-29 00:29:53] 2025-07-28 22:29:24,663 | INFO     | all job control threads have been joined
[2025-07-29 00:29:53] 2025-07-28 22:29:24,880 | INFO     | [job] retrieve thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:24,881 | INFO     | [job] queue monitor thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,054 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,135 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,201 | INFO     | [job] job monitor thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,212 | INFO     | [payload] control thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,485 | INFO     | [data] control thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,521 | INFO     | [payload] failed_post thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,638 | INFO     | [data] copytool_in thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,668 | INFO     | [job] control thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:25,971 | INFO     | [payload] validate_post thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:26,061 | INFO     | [data] copytool_out thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:26,198 | INFO     | [job] validate thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:26,323 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:27,881 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:34,490 | INFO     | job.realtimelogging is not enabled
[2025-07-29 00:29:53] 2025-07-28 22:29:35,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 00:29:53] 2025-07-28 22:29:35,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273230628672)>', '<ExcThread(monitor, started 140272725899008)>']
[2025-07-29 00:29:53] 2025-07-28 22:29:40,765 | INFO     | all workflow threads have been joined
[2025-07-29 00:29:53] 2025-07-28 22:29:40,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 00:29:53] 2025-07-28 22:29:40,765 | INFO     | traces error code: 0
[2025-07-29 00:29:53] 2025-07-28 22:29:40,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 00:29:53] 2025-07-28 22:29:53,456 | INFO     | PID=1080813 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 00:29:53] 2025-07-28 22:29:53,457 | INFO     | .. there are 2 such processes running
[2025-07-29 00:29:53] 2025-07-28 22:29:53,457 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 00:29:53] 2025-07-28 22:29:53,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 00:29:53] 2025-07-28 22:29:53,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 00:29:53] 2025-07-28 22:29:53,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 00:29:53] 2025-07-28 22:29:53,457 | INFO     | [monitor] control thread has ended
[2025-07-29 00:29:53] 2025-07-28 22:29:53,570 [wrapper] ==== pilot stdout END ====
[2025-07-29 00:29:53] 2025-07-28 22:29:53,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 00:29:53] 2025-07-28 22:29:53,575 [wrapper] pilotpid: 1080813
[2025-07-29 00:29:53] 2025-07-28 22:29:53,578 [wrapper] Pilot exit status: 0
[2025-07-29 00:29:53] 2025-07-28 22:29:53,588 [wrapper] pandaids: 6747410646
[2025-07-29 00:29:53] 2025-07-28 22:29:53,622 [wrapper] cleanup supervisor_pilot 1138379 1080814
[2025-07-29 00:29:53] 2025-07-28 22:29:53,624 [wrapper] Test setup, not cleaning
[2025-07-29 00:29:53] 2025-07-28 22:29:53,627 [wrapper] apfmon messages muted
[2025-07-29 00:29:53] 2025-07-28 22:29:53,629 [wrapper] ==== wrapper stdout END ====
[2025-07-29 00:29:53] 2025-07-28 22:29:53,632 [wrapper] ==== wrapper stderr END ====
[2025-07-29 00:29:53]  *** Error codes and diagnostics ***
[2025-07-29 00:29:53]     "exeErrorCode": 0,
[2025-07-29 00:29:53]     "exeErrorDiag": "",
[2025-07-29 00:29:53]     "pilotErrorCode": 0,
[2025-07-29 00:29:53]     "pilotErrorDiag": "",
[2025-07-29 00:29:53]  *** Listing of results directory ***
[2025-07-29 00:29:53] total 434184
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc    530466 Jul 27 13:42 pilot3.tar.gz
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc      5112 Jul 27 13:53 queuedata.json
[2025-07-29 00:29:53] -rwx------ 1 boinc boinc     36292 Jul 27 13:54 runpilot2-wrapper.sh
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc       100 Jul 28 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 00:29:53] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 23:30 run_atlas
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc       105 Jul 28 23:30 job.xml
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc      6523 Jul 28 23:30 init_data.xml
[2025-07-29 00:29:53] -rw-r--r-- 2 boinc boinc 228589288 Jul 28 23:30 EVNT.45743347._002658.pool.root.1
[2025-07-29 00:29:53] -rw-r--r-- 2 boinc boinc     15095 Jul 28 23:30 start_atlas.sh
[2025-07-29 00:29:53] drwxrwx--x 2 boinc boinc      4096 Jul 28 23:30 shared
[2025-07-29 00:29:53] -rw-r--r-- 2 boinc boinc    542896 Jul 28 23:30 input.tar.gz
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc         0 Jul 28 23:30 boinc_lockfile
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc      2563 Jul 28 23:30 pandaJob.out
[2025-07-29 00:29:53] -rw------- 1 boinc boinc    977332 Jul 28 23:30 agis_schedconf.cvmfs.json
[2025-07-29 00:29:53] -rw------- 1 boinc boinc   1589827 Jul 28 23:30 agis_ddmendpoints.agis.ALL.json
[2025-07-29 00:29:53] drwx------ 4 boinc boinc      4096 Jul 28 23:30 pilot3
[2025-07-29 00:29:53] -rw------- 1 boinc boinc 210728493 Jul 29 00:28 HITS.45743349._047927.pool.root.1
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc       529 Jul 29 00:28 boinc_task_state.xml
[2025-07-29 00:29:53] -rw------- 1 boinc boinc      1012 Jul 29 00:29 memory_monitor_summary.json
[2025-07-29 00:29:53] -rw------- 1 boinc boinc    342161 Jul 29 00:29 log.45743349._047927.job.log.tgz.1
[2025-07-29 00:29:53] -rw------- 1 boinc boinc      7765 Jul 29 00:29 heartbeat.json
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc      8192 Jul 29 00:29 boinc_mmap_file
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc        27 Jul 29 00:29 wrapper_checkpoint.txt
[2025-07-29 00:29:53] -rw------- 1 boinc boinc        95 Jul 29 00:29 pilot_heartbeat.json
[2025-07-29 00:29:53] -rw------- 1 boinc boinc       822 Jul 29 00:29 pilotlog.txt
[2025-07-29 00:29:53] -rw------- 1 boinc boinc    362828 Jul 29 00:29 log.45743349._047927.job.log.1
[2025-07-29 00:29:53] -rw------- 1 boinc boinc       357 Jul 29 00:29 output.list
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc       620 Jul 29 00:29 runtime_log
[2025-07-29 00:29:53] -rw------- 1 boinc boinc    727040 Jul 29 00:29 result.tar.gz
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc      8721 Jul 29 00:29 runtime_log.err
[2025-07-29 00:29:53] -rw------- 1 boinc boinc       663 Jul 29 00:29 1crLDmE8E07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNBVLDmKdI3Bn.diag
[2025-07-29 00:29:53] -rw-r--r-- 1 boinc boinc     21506 Jul 29 00:29 stderr.txt
[2025-07-29 00:29:53] HITS file was successfully produced:
[2025-07-29 00:29:53] -rw------- 1 boinc boinc 210728493 Jul 29 00:28 shared/HITS.pool.root.1
[2025-07-29 00:29:53]  *** Contents of shared directory: ***
[2025-07-29 00:29:53] total 430292
[2025-07-29 00:29:53] -rw-r--r-- 2 boinc boinc 228589288 Jul 28 23:30 ATLAS.root_0
[2025-07-29 00:29:53] -rw-r--r-- 2 boinc boinc     15095 Jul 28 23:30 start_atlas.sh
[2025-07-29 00:29:53] -rw-r--r-- 2 boinc boinc    542896 Jul 28 23:30 input.tar.gz
[2025-07-29 00:29:53] -rw------- 1 boinc boinc 210728493 Jul 29 00:28 HITS.pool.root.1
[2025-07-29 00:29:53] -rw------- 1 boinc boinc    727040 Jul 29 00:29 result.tar.gz
00:29:55 (1076510): run_atlas exited; CPU time 37514.486121
00:29:55 (1076510): called boinc_finish(0)

</stderr_txt>
]]>

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