Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:50:46 (247874): wrapper (7.7.26015): starting
06:50:46 (247874): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 06:50:46] Arguments: --nthreads 12
[2025-07-28 06:50:46] Threads: 12
[2025-07-28 06:50:46] Checking for CVMFS
[2025-07-28 06:50:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 06:50:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 06:50:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 06:50:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 06:50:46] 2.13.1.0 184675 159 56652 148836 0 57 3655362 4097025 0 130560 0 143431 99.987 5396 9084 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-28 06:50:46] CVMFS is ok
[2025-07-28 06:50:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 06:50:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 06:50:46] Further information can be found at the LHC@home message board.
[2025-07-28 06:50:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 06:50:46] Checking for apptainer binary...
[2025-07-28 06:50:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-28 06:50:46] apptainer is not installed, using version from CVMFS
[2025-07-28 06:50:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 06:50:47] pckelar6.cern.ch
[2025-07-28 06:50:47] apptainer works
[2025-07-28 06:50:47] Set ATHENA_PROC_NUMBER=12
[2025-07-28 06:50:47] Set ATHENA_CORE_NUMBER=12
[2025-07-28 06:50:47] Starting ATLAS job with PandaID=6747599843
[2025-07-28 06:50:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 08:07:48]  *** The last 200 lines of the pilot log: ***
[2025-07-28 08:07:48]  mtime=0
[2025-07-28 08:07:48]  protocol_id=None
[2025-07-28 08:07:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 08:07:48]  replicas=None
[2025-07-28 08:07:48]  scope=mc23_13p6TeV
[2025-07-28 08:07:48]  status=None
[2025-07-28 08:07:48]  status_code=0
[2025-07-28 08:07:48]  storage_token=
[2025-07-28 08:07:48]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6747599843/log.45743349._054226.job.log.tgz.1
[2025-07-28 08:07:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/af/log.45743349._054226.job.log.tgz.1
[2025-07-28 08:07:48]  workdir=None
[2025-07-28 08:07:48] ]
[2025-07-28 08:07:48] 2025-07-28 06:07:11,405 | INFO     | transferring file log.45743349._054226.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6747599843/log.45743349._054226.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-28 08:07:48] 2025-07-28 06:07:11,405 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6747599843/log.45743349._054226.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._054226.job
[2025-07-28 08:07:48] 2025-07-28 06:07:11,419 | INFO     | adding to output.list: log.45743349._054226.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/af/log.45743349._054226.job.log.tg
[2025-07-28 08:07:48] 2025-07-28 06:07:11,420 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 08:07:48] 2025-07-28 06:07:11,420 | INFO     | summary of transferred files:
[2025-07-28 08:07:48] 2025-07-28 06:07:11,420 | INFO     |  -- lfn=log.45743349._054226.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 08:07:48] 2025-07-28 06:07:11,420 | INFO     | stage-out finished correctly
[2025-07-28 08:07:48] 2025-07-28 06:07:11,862 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 08:07:48] 2025-07-28 06:07:11,928 | INFO     | job 6747599843 has state=finished
[2025-07-28 08:07:48] 2025-07-28 06:07:11,929 | INFO     | preparing for final server update for job 6747599843 in state='finished'
[2025-07-28 08:07:48] 2025-07-28 06:07:11,929 | INFO     | this job has now completed (state=finished)
[2025-07-28 08:07:48] 2025-07-28 06:07:11,929 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 08:07:48] 2025-07-28 06:07:11,929 | INFO     | log transfer has been attempted: DONE
[2025-07-28 08:07:48] 2025-07-28 06:07:11,929 | INFO     | job 6747599843 has finished - writing final server update
[2025-07-28 08:07:48] 2025-07-28 06:07:11,930 | INFO     | total number of processed events: 400 (read)
[2025-07-28 08:07:48] 2025-07-28 06:07:11,931 | INFO     | executing command: lscpu
[2025-07-28 08:07:48] 2025-07-28 06:07:11,949 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 08:07:48] 2025-07-28 06:07:16,079 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-28 08:07:48] 2025-07-28 06:07:16,081 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2199.9800833333334
[2025-07-28 08:07:48] 2025-07-28 06:07:16,082 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6747599843/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 08:07:48] 2025-07-28 06:07:16,083 | INFO     | extracted standard info from prmon json
[2025-07-28 08:07:48] 2025-07-28 06:07:16,083 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 08:07:48] 2025-07-28 06:07:16,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 08:07:48] 2025-07-28 06:07:16,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 08:07:48] 2025-07-28 06:07:16,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 08:07:48] 2025-07-28 06:07:16,085 | INFO     | fitting pss+swap vs Time
[2025-07-28 08:07:48] 2025-07-28 06:07:16,085 | INFO     | sum of square deviations: 97479037.0
[2025-07-28 08:07:48] 2025-07-28 06:07:16,086 | INFO     | sum of deviations: -9938378761.999998
[2025-07-28 08:07:48] 2025-07-28 06:07:16,086 | INFO     | mean x: 1753680624.5
[2025-07-28 08:07:48] 2025-07-28 06:07:16,086 | INFO     | mean y: 2865174.088235294
[2025-07-28 08:07:48] 2025-07-28 06:07:16,086 | INFO     | -- intersect: 178797637981.1041
[2025-07-28 08:07:48] 2025-07-28 06:07:16,086 | INFO     | intersect: 178797637981.1041
[2025-07-28 08:07:48] 2025-07-28 06:07:16,086 | INFO     | chi2: 0.10876357741936353
[2025-07-28 08:07:48] 2025-07-28 06:07:16,086 | INFO     | -- intersect: 178797637981.1041
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | current memory leak: -101.95 B/s (using 68 data points, chi2=0.11)
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | could have reported an average CPU frequency of 2493 MHz (6 samples)
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | ..............................
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | . Timing measurements:
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | . get job = 0 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | . initial setup = 1 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | . payload setup = 5 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | . stage-in = 0 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,087 | INFO     | . payload execution = 4554 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,088 | INFO     | . stage-out = 0 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,088 | INFO     | . log creation = 0 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,088 | INFO     | ..............................
[2025-07-28 08:07:48] 2025-07-28 06:07:16,569 | INFO     | 
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | job summary report
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | --------------------------------------------------
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | PanDA job id: 6747599843
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | task id: 45743349
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | errors: (none)
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | pilot state: finished 
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | transexitcode: 0
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | exeerrorcode: 0
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | exeerrordiag: 
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | exitcode: 0
[2025-07-28 08:07:48] 2025-07-28 06:07:16,570 | INFO     | exitmsg: OK
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | cpuconsumptiontime: 50185 s
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | nevents: 400
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | neventsw: 0
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | pid: 258664
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | pgrp: 258664
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | corecount: 12
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | event service: False
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | sizes: {0: 2397475, 3: 2397737, 11: 2397765, 4562: 2423973, 4563: 2433026, 4564: 2433026, 4568: 2433348}
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | --------------------------------------------------
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | 
[2025-07-28 08:07:48] 2025-07-28 06:07:16,571 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 08:07:48] 2025-07-28 06:07:16,591 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 08:07:48] 2025-07-28 06:07:16,592 | INFO     | job 6747599843 has completed (purged errors)
[2025-07-28 08:07:48] 2025-07-28 06:07:16,592 | INFO     | overall cleanup function is called
[2025-07-28 08:07:48] 2025-07-28 06:07:17,599 | INFO     | --- collectZombieJob: --- 10, [258664]
[2025-07-28 08:07:48] 2025-07-28 06:07:17,599 | INFO     | zombie collector waiting for pid 258664
[2025-07-28 08:07:48] 2025-07-28 06:07:17,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 08:07:48] 2025-07-28 06:07:17,599 | INFO     | collected zombie processes
[2025-07-28 08:07:48] 2025-07-28 06:07:17,599 | INFO     | will attempt to kill all subprocesses of pid=258664
[2025-07-28 08:07:48] 2025-07-28 06:07:17,740 | WARNING  | process 258664 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 08:07:48] 2025-07-28 06:07:17,790 | INFO     | process IDs to be killed: [258664] (in reverse order)
[2025-07-28 08:07:48] 2025-07-28 06:07:17,821 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 08:07:48] 2025-07-28 06:07:17,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 08:07:48] 2025-07-28 06:07:17,829 | INFO     | did not find any defunct processes belonging to 258664
[2025-07-28 08:07:48] 2025-07-28 06:07:17,836 | INFO     | did not find any defunct processes belonging to 258664
[2025-07-28 08:07:48] 2025-07-28 06:07:17,836 | INFO     | ready for new job
[2025-07-28 08:07:48] 2025-07-28 06:07:17,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 08:07:48] 2025-07-28 06:07:17,838 | INFO     | ***************************************
[2025-07-28 08:07:48] 2025-07-28 06:07:17,838 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 08:07:48] 2025-07-28 06:07:17,838 | INFO     | ***************************************
[2025-07-28 08:07:48] 2025-07-28 06:07:17,838 | INFO     | 
[2025-07-28 08:07:48] 2025-07-28 06:07:17,839 | INFO     | architecture information:
[2025-07-28 08:07:48] 2025-07-28 06:07:17,839 | INFO     | executing command: cat /etc/os-release
[2025-07-28 08:07:48] 2025-07-28 06:07:17,849 | INFO     | cat /etc/os-release:
[2025-07-28 08:07:48] NAME="CentOS Linux"
[2025-07-28 08:07:48] VERSION="7 (Core)"
[2025-07-28 08:07:48] ID="centos"
[2025-07-28 08:07:48] ID_LIKE="rhel fedora"
[2025-07-28 08:07:48] VERSION_ID="7"
[2025-07-28 08:07:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 08:07:48] ANSI_COLOR="0;31"
[2025-07-28 08:07:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 08:07:48] HOME_URL="https://www.centos.org/"
[2025-07-28 08:07:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 08:07:48] 
[2025-07-28 08:07:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 08:07:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 08:07:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 08:07:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 08:07:48] 
[2025-07-28 08:07:48] 2025-07-28 06:07:17,850 | INFO     | ***************************************
[2025-07-28 08:07:48] 2025-07-28 06:07:17,862 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 08:07:48] 2025-07-28 06:07:17,863 | INFO     | reaping zombies for max 20 seconds
[2025-07-28 08:07:48] 2025-07-28 06:07:17,873 | INFO     | checking for looping job (in state=finished)
[2025-07-28 08:07:48] 2025-07-28 06:07:17,873 | INFO     | using looping job limit: 7200 s
[2025-07-28 08:07:48] 2025-07-28 06:07:17,950 | INFO     | number of running child processes to parent process 258664: 1
[2025-07-28 08:07:48] 2025-07-28 06:07:17,951 | INFO     | maximum number of monitored processes: 6
[2025-07-28 08:07:48] 2025-07-28 06:07:17,951 | INFO     | aborting job monitoring since job object (job id=6747599843) has expired
[2025-07-28 08:07:48] 2025-07-28 06:07:18,353 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-28 08:07:48] 2025-07-28 06:07:18,367 | INFO     | sufficient remaining disk space (870344294400 B)
[2025-07-28 08:07:48] 2025-07-28 06:07:18,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 08:07:48] 2025-07-28 06:07:18,368 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 08:07:48] 2025-07-28 06:07:18,368 | INFO     | update_server=False
[2025-07-28 08:07:48] 2025-07-28 06:07:18,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 08:07:48] 2025-07-28 06:07:18,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 08:07:48] 2025-07-28 06:07:18,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:07:48] 2025-07-28 06:07:18,368 | INFO     | will abort loop
[2025-07-28 08:07:48] 2025-07-28 06:07:18,494 | INFO     | all job control threads have been joined
[2025-07-28 08:07:48] 2025-07-28 06:07:18,702 | INFO     | all data control threads have been joined
[2025-07-28 08:07:48] 2025-07-28 06:07:19,373 | INFO     | [job] retrieve thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:19,374 | INFO     | [job] job monitor thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:19,380 | INFO     | all payload control threads have been joined
[2025-07-28 08:07:48] 2025-07-28 06:07:19,425 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:19,428 | INFO     | [job] validate thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:19,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 08:07:48] 2025-07-28 06:07:19,500 | INFO     | [job] control thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:19,657 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:19,708 | INFO     | [data] control thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:19,851 | INFO     | [payload] validate_post thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:20,385 | INFO     | [payload] control thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:20,700 | INFO     | [payload] failed_post thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:20,745 | INFO     | [data] copytool_in thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:20,787 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:21,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:07:48] 2025-07-28 06:07:21,501 | INFO     | [data] copytool_out thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:22,175 | INFO     | [job] queue monitor thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:22,374 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:29,110 | INFO     | job.realtimelogging is not enabled
[2025-07-28 08:07:48] 2025-07-28 06:07:30,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 08:07:48] 2025-07-28 06:07:30,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206489360192)>', '<ExcThread(monitor, started 140205935793920)>']
[2025-07-28 08:07:48] 2025-07-28 06:07:35,745 | INFO     | all workflow threads have been joined
[2025-07-28 08:07:48] 2025-07-28 06:07:35,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 08:07:48] 2025-07-28 06:07:35,745 | INFO     | traces error code: 0
[2025-07-28 08:07:48] 2025-07-28 06:07:35,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 08:07:48] 2025-07-28 06:07:48,460 | INFO     | PID=251545 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 08:07:48] 2025-07-28 06:07:48,461 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 08:07:48] 2025-07-28 06:07:48,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 08:07:48] 2025-07-28 06:07:48,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 08:07:48] 2025-07-28 06:07:48,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 08:07:48] 2025-07-28 06:07:48,461 | INFO     | [monitor] control thread has ended
[2025-07-28 08:07:48] 2025-07-28 06:07:48,563 [wrapper] ==== pilot stdout END ====
[2025-07-28 08:07:48] 2025-07-28 06:07:48,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 08:07:48] 2025-07-28 06:07:48,568 [wrapper] pilotpid: 251545
[2025-07-28 08:07:48] 2025-07-28 06:07:48,570 [wrapper] Pilot exit status: 0
[2025-07-28 08:07:48] 2025-07-28 06:07:48,579 [wrapper] pandaids: 6747599843
[2025-07-28 08:07:48] 2025-07-28 06:07:48,608 [wrapper] cleanup supervisor_pilot  277006 251546
[2025-07-28 08:07:48] 2025-07-28 06:07:48,610 [wrapper] Test setup, not cleaning
[2025-07-28 08:07:48] 2025-07-28 06:07:48,612 [wrapper] apfmon messages muted
[2025-07-28 08:07:48] 2025-07-28 06:07:48,614 [wrapper] ==== wrapper stdout END ====
[2025-07-28 08:07:48] 2025-07-28 06:07:48,616 [wrapper] ==== wrapper stderr END ====
[2025-07-28 08:07:48]  *** Error codes and diagnostics ***
[2025-07-28 08:07:48]     "exeErrorCode": 0,
[2025-07-28 08:07:48]     "exeErrorDiag": "",
[2025-07-28 08:07:48]     "pilotErrorCode": 0,
[2025-07-28 08:07:48]     "pilotErrorDiag": "",
[2025-07-28 08:07:48]  *** Listing of results directory ***
[2025-07-28 08:07:48] total 349404
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc    530466 Jul 27 20:41 pilot3.tar.gz
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc      5112 Jul 27 21:10 queuedata.json
[2025-07-28 08:07:48] -rwx------. 1 boinc boinc     36292 Jul 27 21:11 runpilot2-wrapper.sh
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc       100 Jul 28 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 08:07:48] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 06:50 run_atlas
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc       105 Jul 28 06:50 job.xml
[2025-07-28 08:07:48] -rw-r--r--. 2 boinc boinc 147373886 Jul 28 06:50 EVNT.45743347._002899.pool.root.1
[2025-07-28 08:07:48] -rw-r--r--. 2 boinc boinc     15095 Jul 28 06:50 start_atlas.sh
[2025-07-28 08:07:48] drwxrwx--x. 2 boinc boinc        68 Jul 28 06:50 shared
[2025-07-28 08:07:48] -rw-r--r--. 2 boinc boinc    542897 Jul 28 06:50 input.tar.gz
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc      6291 Jul 28 06:50 init_data.xml
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc         0 Jul 28 06:50 boinc_lockfile
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc      2563 Jul 28 06:50 pandaJob.out
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc    980125 Jul 28 06:50 agis_schedconf.cvmfs.json
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc   1593052 Jul 28 06:50 agis_ddmendpoints.agis.ALL.json
[2025-07-28 08:07:48] drwx------. 4 boinc boinc      4096 Jul 28 06:50 pilot3
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc 204958134 Jul 28 08:06 HITS.45743349._054226.pool.root.1
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc        95 Jul 28 08:06 pilot_heartbeat.json
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc       529 Jul 28 08:07 boinc_task_state.xml
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc      1014 Jul 28 08:07 memory_monitor_summary.json
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc    358096 Jul 28 08:07 log.45743349._054226.job.log.tgz.1
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc      7785 Jul 28 08:07 heartbeat.json
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc      8192 Jul 28 08:07 boinc_mmap_file
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc        27 Jul 28 08:07 wrapper_checkpoint.txt
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc       746 Jul 28 08:07 pilotlog.txt
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc    440970 Jul 28 08:07 log.45743349._054226.job.log.1
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc       357 Jul 28 08:07 output.list
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc       620 Jul 28 08:07 runtime_log
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc    819200 Jul 28 08:07 result.tar.gz
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc      8684 Jul 28 08:07 runtime_log.err
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc       655 Jul 28 08:07 it9NDmvxL07n9Rq4apOajLDm4fhM0noT9bVof3QYDmGz2KDm3F3mLn.diag
[2025-07-28 08:07:48] -rw-r--r--. 1 boinc boinc     21719 Jul 28 08:07 stderr.txt
[2025-07-28 08:07:48] HITS file was successfully produced:
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc 204958134 Jul 28 08:06 shared/HITS.pool.root.1
[2025-07-28 08:07:48]  *** Contents of shared directory: ***
[2025-07-28 08:07:48] total 345424
[2025-07-28 08:07:48] -rw-r--r--. 2 boinc boinc 147373886 Jul 28 06:50 ATLAS.root_0
[2025-07-28 08:07:48] -rw-r--r--. 2 boinc boinc     15095 Jul 28 06:50 start_atlas.sh
[2025-07-28 08:07:48] -rw-r--r--. 2 boinc boinc    542897 Jul 28 06:50 input.tar.gz
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc 204958134 Jul 28 08:06 HITS.pool.root.1
[2025-07-28 08:07:48] -rw-------. 1 boinc boinc    819200 Jul 28 08:07 result.tar.gz
08:07:49 (247874): run_atlas exited; CPU time 50216.353890
08:07:49 (247874): called boinc_finish(0)

</stderr_txt>
]]>

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