Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:33:35 (1046673): wrapper (7.7.26015): starting
20:33:35 (1046673): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:33:35] Arguments: --nthreads 8
[2025-07-27 20:33:35] Threads: 8
[2025-07-27 20:33:35] Checking for CVMFS
[2025-07-27 20:33:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:33:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:33:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:33:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:33:35] 2.13.1.0 5065 2722 145748 148829 1 319 26867575 40960000 9592 16776704 0 8380448 99.715 5523497 25706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:33:35] CVMFS is ok
[2025-07-27 20:33:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:33:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:33:35] Further information can be found at the LHC@home message board.
[2025-07-27 20:33:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:33:35] Checking for apptainer binary...
[2025-07-27 20:33:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:33:35] Running /usr/bin/apptainer --version
[2025-07-27 20:33:35] apptainer version 1.4.1-1.el9
[2025-07-27 20:33:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:33:35] c-206-35.aglt2.org
[2025-07-27 20:33:35] apptainer works
[2025-07-27 20:33:35] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:33:35] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:33:35] Starting ATLAS job with PandaID=6747599759
[2025-07-27 20:33:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:08:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:08:33]  lfn=log.45743349._054142.job.log.tgz.1
[2025-07-27 22:08:33]  mtime=0
[2025-07-27 22:08:33]  protocol_id=None
[2025-07-27 22:08:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 22:08:33]  replicas=None
[2025-07-27 22:08:33]  scope=mc23_13p6TeV
[2025-07-27 22:08:33]  status=None
[2025-07-27 22:08:33]  status_code=0
[2025-07-27 22:08:33]  storage_token=
[2025-07-27 22:08:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747599759/log.45743349._054142.job.log.tgz.1
[2025-07-27 22:08:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/d3/log.45743349._054142.job.log.tgz.1
[2025-07-27 22:08:33]  workdir=None
[2025-07-27 22:08:33] ]
[2025-07-27 22:08:33] 2025-07-28 02:07:54,320 | INFO     | transferring file log.45743349._054142.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747599759/log.45743349._054142.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 22:08:33] 2025-07-28 02:07:54,320 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747599759/log.45743349._054142.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._054142.job
[2025-07-27 22:08:33] 2025-07-28 02:07:54,341 | INFO     | adding to output.list: log.45743349._054142.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/d3/log.45743349._054142.job.log.tg
[2025-07-27 22:08:33] 2025-07-28 02:07:54,342 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:08:33] 2025-07-28 02:07:54,342 | INFO     | summary of transferred files:
[2025-07-27 22:08:33] 2025-07-28 02:07:54,342 | INFO     |  -- lfn=log.45743349._054142.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:08:33] 2025-07-28 02:07:54,343 | INFO     | stage-out finished correctly
[2025-07-27 22:08:33] 2025-07-28 02:07:55,592 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:08:33] 2025-07-28 02:07:56,762 | INFO     | job 6747599759 has state=finished
[2025-07-27 22:08:33] 2025-07-28 02:07:56,762 | INFO     | preparing for final server update for job 6747599759 in state='finished'
[2025-07-27 22:08:33] 2025-07-28 02:07:56,822 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 22:08:33] 2025-07-28 02:07:56,823 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:08:33] 2025-07-28 02:07:56,823 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:08:33] 2025-07-28 02:07:56,823 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:08:33] 2025-07-28 02:07:56,823 | INFO     | job 6747599759 has finished - writing final server update
[2025-07-27 22:08:33] 2025-07-28 02:07:56,823 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:08:33] 2025-07-28 02:07:56,824 | INFO     | executing command: lscpu
[2025-07-27 22:08:33] 2025-07-28 02:07:56,874 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:08:33] 2025-07-28 02:07:57,865 | WARNING  | process 1068676 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 22:08:33] 2025-07-28 02:07:57,866 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747599759/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:08:33] 2025-07-28 02:07:58,095 | INFO     | number of running child processes to parent process 1068676: 1
[2025-07-27 22:08:33] 2025-07-28 02:07:58,095 | INFO     | maximum number of monitored processes: 6
[2025-07-27 22:08:33] 2025-07-28 02:08:00,598 | INFO     | monitor loop #411: job 0:6747599759 is in state 'finished'
[2025-07-27 22:08:33] 2025-07-28 02:08:00,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:08:33] 2025-07-28 02:08:01,415 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:08:33] 2025-07-28 02:08:01,418 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3262.4424375000003
[2025-07-27 22:08:33] 2025-07-28 02:08:01,427 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747599759/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:08:33] 2025-07-28 02:08:01,427 | INFO     | extracted standard info from prmon json
[2025-07-27 22:08:33] 2025-07-28 02:08:01,427 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:08:33] 2025-07-28 02:08:01,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:08:33] 2025-07-28 02:08:01,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:08:33] 2025-07-28 02:08:01,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:08:33] 2025-07-28 02:08:01,429 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:08:33] 2025-07-28 02:08:01,429 | INFO     | sum of square deviations: 197196080.93023226
[2025-07-27 22:08:33] 2025-07-28 02:08:01,429 | INFO     | sum of deviations: -9712877277.651163
[2025-07-27 22:08:33] 2025-07-28 02:08:01,429 | INFO     | mean x: 1753665745.5813954
[2025-07-27 22:08:33] 2025-07-28 02:08:01,429 | INFO     | mean y: 2656609.593023256
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | -- intersect: 86379323389.69513
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | intersect: 86379323389.69513
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | chi2: 0.038974712835505236
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | -- intersect: 86379323389.69513
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | current memory leak: -49.25 B/s (using 86 data points, chi2=0.04)
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | could have reported an average CPU frequency of 3232 MHz (7 samples)
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | ..............................
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . Timing measurements:
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . get job = 0 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . initial setup = 2 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . payload setup = 5 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . stage-in = 0 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . payload execution = 5624 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . stage-out = 0 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | . log creation = 0 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,430 | INFO     | ..............................
[2025-07-27 22:08:33] 2025-07-28 02:08:01,495 | INFO     | 
[2025-07-27 22:08:33] 2025-07-28 02:08:01,495 | INFO     | job summary report
[2025-07-27 22:08:33] 2025-07-28 02:08:01,495 | INFO     | --------------------------------------------------
[2025-07-27 22:08:33] 2025-07-28 02:08:01,495 | INFO     | PanDA job id: 6747599759
[2025-07-27 22:08:33] 2025-07-28 02:08:01,495 | INFO     | task id: 45743349
[2025-07-27 22:08:33] 2025-07-28 02:08:01,495 | INFO     | errors: (none)
[2025-07-27 22:08:33] 2025-07-28 02:08:01,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | pilot state: finished 
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | transexitcode: 0
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | exeerrorcode: 0
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | exeerrordiag: 
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | exitcode: 0
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | exitmsg: OK
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | cpuconsumptiontime: 37509 s
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | nevents: 400
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | neventsw: 0
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | pid: 1068676
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | pgrp: 1068676
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | corecount: 8
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | event service: False
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | sizes: {0: 2397424, 4: 2397686, 11: 2397714, 5633: 2424450, 5635: 2433448, 5637: 2433504, 5642: 2433826}
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | --------------------------------------------------
[2025-07-27 22:08:33] 2025-07-28 02:08:01,496 | INFO     | 
[2025-07-27 22:08:33] 2025-07-28 02:08:01,497 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | job 6747599759 has completed (purged errors)
[2025-07-27 22:08:33] 2025-07-28 02:08:01,520 | INFO     | overall cleanup function is called
[2025-07-27 22:08:33] 2025-07-28 02:08:02,523 | INFO     | --- collectZombieJob: --- 10, [1068676]
[2025-07-27 22:08:33] 2025-07-28 02:08:02,524 | INFO     | zombie collector waiting for pid 1068676
[2025-07-27 22:08:33] 2025-07-28 02:08:02,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:08:33] 2025-07-28 02:08:02,524 | INFO     | collected zombie processes
[2025-07-27 22:08:33] 2025-07-28 02:08:02,524 | INFO     | will attempt to kill all subprocesses of pid=1068676
[2025-07-27 22:08:33] 2025-07-28 02:08:02,747 | INFO     | process IDs to be killed: [1068676] (in reverse order)
[2025-07-27 22:08:33] 2025-07-28 02:08:02,853 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:08:33] 2025-07-28 02:08:02,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:08:33] 2025-07-28 02:08:02,865 | INFO     | did not find any defunct processes belonging to 1068676
[2025-07-27 22:08:33] 2025-07-28 02:08:02,877 | INFO     | did not find any defunct processes belonging to 1068676
[2025-07-27 22:08:33] 2025-07-28 02:08:02,878 | INFO     | ready for new job
[2025-07-27 22:08:33] 2025-07-28 02:08:02,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:08:33] 2025-07-28 02:08:02,879 | INFO     | ***************************************
[2025-07-27 22:08:33] 2025-07-28 02:08:02,880 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:08:33] 2025-07-28 02:08:02,880 | INFO     | ***************************************
[2025-07-27 22:08:33] 2025-07-28 02:08:02,880 | INFO     | 
[2025-07-27 22:08:33] 2025-07-28 02:08:02,883 | INFO     | architecture information:
[2025-07-27 22:08:33] 2025-07-28 02:08:02,883 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:08:33] 2025-07-28 02:08:02,900 | INFO     | cat /etc/os-release:
[2025-07-27 22:08:33] NAME="CentOS Linux"
[2025-07-27 22:08:33] VERSION="7 (Core)"
[2025-07-27 22:08:33] ID="centos"
[2025-07-27 22:08:33] ID_LIKE="rhel fedora"
[2025-07-27 22:08:33] VERSION_ID="7"
[2025-07-27 22:08:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:08:33] ANSI_COLOR="0;31"
[2025-07-27 22:08:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:08:33] HOME_URL="https://www.centos.org/"
[2025-07-27 22:08:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:08:33] 
[2025-07-27 22:08:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:08:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:08:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:08:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:08:33] 
[2025-07-27 22:08:33] 2025-07-28 02:08:02,901 | INFO     | ***************************************
[2025-07-27 22:08:33] 2025-07-28 02:08:03,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 22:08:33] 2025-07-28 02:08:03,426 | INFO     | sufficient remaining disk space (85920317440 B)
[2025-07-27 22:08:33] 2025-07-28 02:08:03,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:08:33] 2025-07-28 02:08:03,427 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:08:33] 2025-07-28 02:08:03,427 | INFO     | update_server=False
[2025-07-27 22:08:33] 2025-07-28 02:08:03,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:08:33] 2025-07-28 02:08:03,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:08:33] 2025-07-28 02:08:03,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:08:33] 2025-07-28 02:08:03,462 | INFO     | all job control threads have been joined
[2025-07-27 22:08:33] 2025-07-28 02:08:03,857 | INFO     | all data control threads have been joined
[2025-07-27 22:08:33] 2025-07-28 02:08:03,956 | INFO     | all payload control threads have been joined
[2025-07-27 22:08:33] 2025-07-28 02:08:04,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:08:33] 2025-07-28 02:08:04,107 | INFO     | aborting loop
[2025-07-27 22:08:33] 2025-07-28 02:08:04,432 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:04,433 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:04,466 | INFO     | [job] control thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:04,530 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:04,862 | INFO     | [data] control thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:04,962 | INFO     | [payload] control thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,112 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,227 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,298 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,434 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,452 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,599 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,710 | INFO     | [job] validate thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:05,905 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:06,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:08:33] 2025-07-28 02:08:10,184 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:08:33] 2025-07-28 02:08:11,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994970748736)>', '<ExcThread(monitor, started 139994006001408)>']
[2025-07-27 22:08:33] 2025-07-28 02:08:16,502 | INFO     | all workflow threads have been joined
[2025-07-27 22:08:33] 2025-07-28 02:08:16,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:08:33] 2025-07-28 02:08:16,502 | INFO     | traces error code: 0
[2025-07-27 22:08:33] 2025-07-28 02:08:16,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:08:33] 2025-07-28 02:08:32,916 | INFO     | PID=1053924 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:08:33] 2025-07-28 02:08:32,916 | INFO     | .. there are 10 such processes running
[2025-07-27 22:08:33] 2025-07-28 02:08:32,916 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:08:33] 2025-07-28 02:08:32,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:08:33] 2025-07-28 02:08:32,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:08:33] 2025-07-28 02:08:32,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:08:33] 2025-07-28 02:08:32,917 | INFO     | [monitor] control thread has ended
[2025-07-27 22:08:33] 2025-07-28 02:08:33,058 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:08:33] 2025-07-28 02:08:33,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:08:33] 2025-07-28 02:08:33,063 [wrapper] pilotpid: 1053924
[2025-07-27 22:08:33] 2025-07-28 02:08:33,065 [wrapper] Pilot exit status: 0
[2025-07-27 22:08:33] 2025-07-28 02:08:33,074 [wrapper] pandaids: 6747599759
[2025-07-27 22:08:33] 2025-07-28 02:08:33,127 [wrapper] cleanup supervisor_pilot 1224951 1053925
[2025-07-27 22:08:33] 2025-07-28 02:08:33,130 [wrapper] Test setup, not cleaning
[2025-07-27 22:08:33] 2025-07-28 02:08:33,133 [wrapper] apfmon messages muted
[2025-07-27 22:08:33] 2025-07-28 02:08:33,136 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:08:33] 2025-07-28 02:08:33,138 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:08:33]  *** Error codes and diagnostics ***
[2025-07-27 22:08:33]     "exeErrorCode": 0,
[2025-07-27 22:08:33]     "exeErrorDiag": "",
[2025-07-27 22:08:33]     "pilotErrorCode": 0,
[2025-07-27 22:08:33]     "pilotErrorDiag": "",
[2025-07-27 22:08:33]  *** Listing of results directory ***
[2025-07-27 22:08:33] total 362848
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:41 pilot3.tar.gz
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:50 queuedata.json
[2025-07-27 22:08:33] -rwx------. 1 boincer umatlas     36292 Jul 27 14:52 runpilot2-wrapper.sh
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:08:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:33 run_atlas
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:33 job.xml
[2025-07-27 22:08:33] -rw-r--r--. 2 boincer umatlas 150653037 Jul 27 20:33 EVNT.45743347._002888.pool.root.1
[2025-07-27 22:08:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:33 start_atlas.sh
[2025-07-27 22:08:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:33 shared
[2025-07-27 22:08:33] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 20:33 input.tar.gz
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:33 boinc_lockfile
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 20:33 pandaJob.out
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas    980125 Jul 27 20:33 agis_schedconf.cvmfs.json
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:08:33] drwx------. 4 boincer umatlas      4096 Jul 27 20:33 pilot3
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas      6895 Jul 27 22:00 init_data.xml
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas 215328541 Jul 27 22:07 HITS.45743349._054142.pool.root.1
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas       529 Jul 27 22:07 boinc_task_state.xml
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas      1044 Jul 27 22:07 memory_monitor_summary.json
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas    302575 Jul 27 22:07 log.45743349._054142.job.log.tgz.1
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas      7775 Jul 27 22:08 heartbeat.json
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:08 boinc_mmap_file
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:08 wrapper_checkpoint.txt
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas        95 Jul 27 22:08 pilot_heartbeat.json
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas       823 Jul 27 22:08 pilotlog.txt
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas    544885 Jul 27 22:08 log.45743349._054142.job.log.1
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas       357 Jul 27 22:08 output.list
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:08 runtime_log
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas    870400 Jul 27 22:08 result.tar.gz
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 22:08 runtime_log.err
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas       653 Jul 27 22:08 acVNDmoeL07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxAWLDmzeXqTo.diag
[2025-07-27 22:08:33] -rw-r--r--. 1 boincer umatlas     21699 Jul 27 22:08 stderr.txt
[2025-07-27 22:08:33] HITS file was successfully produced:
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas 215328541 Jul 27 22:07 shared/HITS.pool.root.1
[2025-07-27 22:08:33]  *** Contents of shared directory: ***
[2025-07-27 22:08:33] total 358812
[2025-07-27 22:08:33] -rw-r--r--. 2 boincer umatlas 150653037 Jul 27 20:33 ATLAS.root_0
[2025-07-27 22:08:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:33 start_atlas.sh
[2025-07-27 22:08:33] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 20:33 input.tar.gz
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas 215328541 Jul 27 22:07 HITS.pool.root.1
[2025-07-27 22:08:33] -rw-------. 1 boincer umatlas    870400 Jul 27 22:08 result.tar.gz
22:08:35 (1046673): run_atlas exited; CPU time 37532.556410
22:08:35 (1046673): called boinc_finish(0)

</stderr_txt>
]]>

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