Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:19:51 (1995235): wrapper (7.7.26015): starting
20:19:51 (1995235): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:19:51] Arguments: --nthreads 8
[2025-07-27 20:19:51] Threads: 8
[2025-07-27 20:19:51] Checking for CVMFS
[2025-07-27 20:19:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:19:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:19:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:19:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:19:51] 2.13.1.0 1602499 13640 221444 148828 0 440 40445169 40960001 15298 16776704 0 79873286 99.754 78726287 35858 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:19:51] CVMFS is ok
[2025-07-27 20:19:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:19:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:19:51] Further information can be found at the LHC@home message board.
[2025-07-27 20:19:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:19:51] Checking for apptainer binary...
[2025-07-27 20:19:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:19:51] Running /usr/bin/apptainer --version
[2025-07-27 20:19:51] apptainer version 1.4.1-1.el9
[2025-07-27 20:19:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:19:51] c-212-17.aglt2.org
[2025-07-27 20:19:51] apptainer works
[2025-07-27 20:19:51] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:19:51] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:19:51] Starting ATLAS job with PandaID=6747525937
[2025-07-27 20:19:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:51:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:51:19]  lfn=log.45743349._052306.job.log.tgz.1
[2025-07-27 21:51:19]  mtime=0
[2025-07-27 21:51:19]  protocol_id=None
[2025-07-27 21:51:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 21:51:19]  replicas=None
[2025-07-27 21:51:19]  scope=mc23_13p6TeV
[2025-07-27 21:51:19]  status=None
[2025-07-27 21:51:19]  status_code=0
[2025-07-27 21:51:19]  storage_token=
[2025-07-27 21:51:19]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747525937/log.45743349._052306.job.log.tgz.1
[2025-07-27 21:51:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/80/log.45743349._052306.job.log.tgz.1
[2025-07-27 21:51:19]  workdir=None
[2025-07-27 21:51:19] ]
[2025-07-27 21:51:19] 2025-07-28 01:50:38,153 | INFO     | transferring file log.45743349._052306.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747525937/log.45743349._052306.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 21:51:19] 2025-07-28 01:50:38,153 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747525937/log.45743349._052306.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._052306.job
[2025-07-27 21:51:19] 2025-07-28 01:50:38,176 | INFO     | adding to output.list: log.45743349._052306.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/80/log.45743349._052306.job.log.tg
[2025-07-27 21:51:19] 2025-07-28 01:50:38,177 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:51:19] 2025-07-28 01:50:38,177 | INFO     | summary of transferred files:
[2025-07-27 21:51:19] 2025-07-28 01:50:38,177 | INFO     |  -- lfn=log.45743349._052306.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:51:19] 2025-07-28 01:50:38,178 | INFO     | stage-out finished correctly
[2025-07-27 21:51:19] 2025-07-28 01:50:38,240 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:51:19] 2025-07-28 01:50:38,385 | INFO     | PID=2001685 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 21:51:19] 2025-07-28 01:50:38,385 | INFO     | .. there are 17 such processes running
[2025-07-27 21:51:19] 2025-07-28 01:50:39,560 | INFO     | job 6747525937 has state=finished
[2025-07-27 21:51:19] 2025-07-28 01:50:39,577 | INFO     | preparing for final server update for job 6747525937 in state='finished'
[2025-07-27 21:51:19] 2025-07-28 01:50:39,578 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:51:19] 2025-07-28 01:50:39,578 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:51:19] 2025-07-28 01:50:39,579 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:51:19] 2025-07-28 01:50:39,580 | INFO     | job 6747525937 has finished - writing final server update
[2025-07-27 21:51:19] 2025-07-28 01:50:39,580 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:51:19] 2025-07-28 01:50:39,585 | INFO     | executing command: lscpu
[2025-07-27 21:51:19] 2025-07-28 01:50:39,666 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:51:19] 2025-07-28 01:50:42,771 | WARNING  | process 2018490 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 21:51:19] 2025-07-28 01:50:42,771 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747525937/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:51:19] 2025-07-28 01:50:43,274 | INFO     | number of running child processes to parent process 2018490: 1
[2025-07-27 21:51:19] 2025-07-28 01:50:43,275 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:51:19] 2025-07-28 01:50:45,331 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 21:51:19] 2025-07-28 01:50:45,340 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3156.498291666668
[2025-07-27 21:51:19] 2025-07-28 01:50:45,351 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747525937/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:51:19] 2025-07-28 01:50:45,352 | INFO     | extracted standard info from prmon json
[2025-07-27 21:51:19] 2025-07-28 01:50:45,352 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:51:19] 2025-07-28 01:50:45,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:51:19] 2025-07-28 01:50:45,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:51:19] 2025-07-28 01:50:45,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:51:19] 2025-07-28 01:50:45,360 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:51:19] 2025-07-28 01:50:45,361 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 21:51:19] 2025-07-28 01:50:45,361 | INFO     | sum of deviations: -18731742750.000008
[2025-07-27 21:51:19] 2025-07-28 01:50:45,363 | INFO     | mean x: 1753664814.5
[2025-07-27 21:51:19] 2025-07-28 01:50:45,364 | INFO     | mean y: 2797565.1951219514
[2025-07-27 21:51:19] 2025-07-28 01:50:45,364 | INFO     | -- intersect: 192165627387.59998
[2025-07-27 21:51:19] 2025-07-28 01:50:45,364 | INFO     | intersect: 192165627387.59998
[2025-07-27 21:51:19] 2025-07-28 01:50:45,364 | INFO     | chi2: 0.14797126019565365
[2025-07-27 21:51:19] 2025-07-28 01:50:45,364 | INFO     | -- intersect: 192165627387.59998
[2025-07-27 21:51:19] 2025-07-28 01:50:45,364 | INFO     | current memory leak: -109.58 B/s (using 82 data points, chi2=0.15)
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | could have reported an average CPU frequency of 3130 MHz (6 samples)
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | ..............................
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | . Timing measurements:
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | . get job = 0 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | . initial setup = 2 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | . payload setup = 8 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | . stage-in = 0 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,365 | INFO     | . payload execution = 5400 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,366 | INFO     | . stage-out = 1 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,366 | INFO     | . log creation = 0 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,366 | INFO     | ..............................
[2025-07-27 21:51:19] 2025-07-28 01:50:45,444 | INFO     | 
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | job summary report
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | --------------------------------------------------
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | PanDA job id: 6747525937
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | task id: 45743349
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | errors: (none)
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | pilot state: finished 
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | transexitcode: 0
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | exeerrorcode: 0
[2025-07-27 21:51:19] 2025-07-28 01:50:45,445 | INFO     | exeerrordiag: 
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | exitcode: 0
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | exitmsg: OK
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | cpuconsumptiontime: 37881 s
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | nevents: 400
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | neventsw: 0
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | pid: 2018490
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | pgrp: 2018490
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | corecount: 8
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | event service: False
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | sizes: {0: 2397424, 6: 2397686, 11: 2397714, 5412: 2424147, 5413: 2433201, 5420: 2433339}
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | --------------------------------------------------
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | 
[2025-07-27 21:51:19] 2025-07-28 01:50:45,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 21:51:19] 2025-07-28 01:50:45,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:51:19] 2025-07-28 01:50:45,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:51:19] 2025-07-28 01:50:45,507 | INFO     | job 6747525937 has completed (purged errors)
[2025-07-27 21:51:19] 2025-07-28 01:50:45,507 | INFO     | overall cleanup function is called
[2025-07-27 21:51:19] 2025-07-28 01:50:46,533 | INFO     | --- collectZombieJob: --- 10, [2018490]
[2025-07-27 21:51:19] 2025-07-28 01:50:46,533 | INFO     | zombie collector waiting for pid 2018490
[2025-07-27 21:51:19] 2025-07-28 01:50:46,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:51:19] 2025-07-28 01:50:46,533 | INFO     | collected zombie processes
[2025-07-27 21:51:19] 2025-07-28 01:50:46,533 | INFO     | will attempt to kill all subprocesses of pid=2018490
[2025-07-27 21:51:19] 2025-07-28 01:50:46,949 | INFO     | process IDs to be killed: [2018490] (in reverse order)
[2025-07-27 21:51:19] 2025-07-28 01:50:47,101 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:51:19] 2025-07-28 01:50:47,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:51:19] 2025-07-28 01:50:47,120 | INFO     | did not find any defunct processes belonging to 2018490
[2025-07-27 21:51:19] 2025-07-28 01:50:47,135 | INFO     | did not find any defunct processes belonging to 2018490
[2025-07-27 21:51:19] 2025-07-28 01:50:47,136 | INFO     | ready for new job
[2025-07-27 21:51:19] 2025-07-28 01:50:47,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:51:19] 2025-07-28 01:50:47,138 | INFO     | ***************************************
[2025-07-27 21:51:19] 2025-07-28 01:50:47,139 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:51:19] 2025-07-28 01:50:47,139 | INFO     | ***************************************
[2025-07-27 21:51:19] 2025-07-28 01:50:47,139 | INFO     | 
[2025-07-27 21:51:19] 2025-07-28 01:50:47,144 | INFO     | architecture information:
[2025-07-27 21:51:19] 2025-07-28 01:50:47,145 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:51:19] 2025-07-28 01:50:47,167 | INFO     | cat /etc/os-release:
[2025-07-27 21:51:19] NAME="CentOS Linux"
[2025-07-27 21:51:19] VERSION="7 (Core)"
[2025-07-27 21:51:19] ID="centos"
[2025-07-27 21:51:19] ID_LIKE="rhel fedora"
[2025-07-27 21:51:19] VERSION_ID="7"
[2025-07-27 21:51:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:51:19] ANSI_COLOR="0;31"
[2025-07-27 21:51:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:51:19] HOME_URL="https://www.centos.org/"
[2025-07-27 21:51:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:51:19] 
[2025-07-27 21:51:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:51:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:51:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:51:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:51:19] 
[2025-07-27 21:51:19] 2025-07-28 01:50:47,168 | INFO     | ***************************************
[2025-07-27 21:51:19] 2025-07-28 01:50:47,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 21:51:19] 2025-07-28 01:50:47,710 | INFO     | sufficient remaining disk space (129123745792 B)
[2025-07-27 21:51:19] 2025-07-28 01:50:47,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:51:19] 2025-07-28 01:50:47,711 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:51:19] 2025-07-28 01:50:47,711 | INFO     | update_server=False
[2025-07-27 21:51:19] 2025-07-28 01:50:47,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:51:19] 2025-07-28 01:50:47,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:51:19] 2025-07-28 01:50:47,712 | INFO     | aborting loop
[2025-07-27 21:51:19] 2025-07-28 01:50:48,017 | INFO     | all job control threads have been joined
[2025-07-27 21:51:19] 2025-07-28 01:50:48,538 | INFO     | all data control threads have been joined
[2025-07-27 21:51:19] 2025-07-28 01:50:48,541 | INFO     | all payload control threads have been joined
[2025-07-27 21:51:19] 2025-07-28 01:50:48,717 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:48,718 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:48,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:51:19] 2025-07-28 01:50:48,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:51:19] 2025-07-28 01:50:48,834 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:48,942 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:49,024 | INFO     | [job] control thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:49,270 | INFO     | [job] validate thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:49,299 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:49,543 | INFO     | [data] control thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:49,546 | INFO     | [payload] control thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:49,896 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:49,960 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:50,139 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:50,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:51:19] 2025-07-28 01:50:50,761 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:51,461 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:52,815 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:57,773 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:51:19] 2025-07-28 01:50:58,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:51:19] 2025-07-28 01:50:59,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355016156992)>', '<ExcThread(monitor, started 140354665821952)>']
[2025-07-27 21:51:19] 2025-07-28 01:51:04,744 | INFO     | all workflow threads have been joined
[2025-07-27 21:51:19] 2025-07-28 01:51:04,744 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:51:19] 2025-07-28 01:51:04,744 | INFO     | traces error code: 0
[2025-07-27 21:51:19] 2025-07-28 01:51:04,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:51:19] 2025-07-28 01:51:18,961 | INFO     | PID=2001685 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:51:19] 2025-07-28 01:51:18,962 | INFO     | .. there are 17 such processes running
[2025-07-27 21:51:19] 2025-07-28 01:51:18,962 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:51:19] 2025-07-28 01:51:18,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:51:19] 2025-07-28 01:51:18,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:51:19] 2025-07-28 01:51:18,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:51:19] 2025-07-28 01:51:18,962 | INFO     | [monitor] control thread has ended
[2025-07-27 21:51:19] 2025-07-28 01:51:19,226 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:51:19] 2025-07-28 01:51:19,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:51:19] 2025-07-28 01:51:19,239 [wrapper] pilotpid: 2001685
[2025-07-27 21:51:19] 2025-07-28 01:51:19,249 [wrapper] Pilot exit status: 0
[2025-07-27 21:51:19] 2025-07-28 01:51:19,265 [wrapper] pandaids: 6747525937
[2025-07-27 21:51:19] 2025-07-28 01:51:19,355 [wrapper] cleanup supervisor_pilot 2618840 2001686
[2025-07-27 21:51:19] 2025-07-28 01:51:19,358 [wrapper] Test setup, not cleaning
[2025-07-27 21:51:19] 2025-07-28 01:51:19,361 [wrapper] apfmon messages muted
[2025-07-27 21:51:19] 2025-07-28 01:51:19,364 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:51:19] 2025-07-28 01:51:19,368 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:51:19]  *** Error codes and diagnostics ***
[2025-07-27 21:51:19]     "exeErrorCode": 0,
[2025-07-27 21:51:19]     "exeErrorDiag": "",
[2025-07-27 21:51:19]     "pilotErrorCode": 0,
[2025-07-27 21:51:19]     "pilotErrorDiag": "",
[2025-07-27 21:51:19]  *** Listing of results directory ***
[2025-07-27 21:51:19] total 350112
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:02 pilot3.tar.gz
[2025-07-27 21:51:19] -rwx------. 1 boincer umatlas     36292 Jul 27 12:25 runpilot2-wrapper.sh
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 12:25 queuedata.json
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:51:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:19 run_atlas
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:19 job.xml
[2025-07-27 21:51:19] -rw-r--r--. 2 boincer umatlas 144722168 Jul 27 20:19 EVNT.45743347._002881.pool.root.1
[2025-07-27 21:51:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:19 start_atlas.sh
[2025-07-27 21:51:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:19 shared
[2025-07-27 21:51:19] -rw-r--r--. 2 boincer umatlas    542883 Jul 27 20:19 input.tar.gz
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:19 boinc_lockfile
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 20:19 pandaJob.out
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas    980125 Jul 27 20:20 agis_schedconf.cvmfs.json
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:20 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:51:19] drwx------. 4 boincer umatlas      4096 Jul 27 20:20 pilot3
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas      6943 Jul 27 21:47 init_data.xml
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas 208270548 Jul 27 21:50 HITS.45743349._052306.pool.root.1
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas       529 Jul 27 21:50 boinc_task_state.xml
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas        95 Jul 27 21:50 pilot_heartbeat.json
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas      1033 Jul 27 21:50 memory_monitor_summary.json
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas    303706 Jul 27 21:50 log.45743349._052306.job.log.tgz.1
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas      7777 Jul 27 21:50 heartbeat.json
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 21:51 boinc_mmap_file
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas        27 Jul 27 21:51 wrapper_checkpoint.txt
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas       823 Jul 27 21:51 pilotlog.txt
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas    519531 Jul 27 21:51 log.45743349._052306.job.log.1
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas       357 Jul 27 21:51 output.list
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas       620 Jul 27 21:51 runtime_log
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas    839680 Jul 27 21:51 result.tar.gz
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 21:51 runtime_log.err
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas       654 Jul 27 21:51 1wYLDmYMJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZpVLDmbtLx8m.diag
[2025-07-27 21:51:19] -rw-r--r--. 1 boincer umatlas     21720 Jul 27 21:51 stderr.txt
[2025-07-27 21:51:19] HITS file was successfully produced:
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas 208270548 Jul 27 21:50 shared/HITS.pool.root.1
[2025-07-27 21:51:19]  *** Contents of shared directory: ***
[2025-07-27 21:51:19] total 346100
[2025-07-27 21:51:19] -rw-r--r--. 2 boincer umatlas 144722168 Jul 27 20:19 ATLAS.root_0
[2025-07-27 21:51:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:19 start_atlas.sh
[2025-07-27 21:51:19] -rw-r--r--. 2 boincer umatlas    542883 Jul 27 20:19 input.tar.gz
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas 208270548 Jul 27 21:50 HITS.pool.root.1
[2025-07-27 21:51:19] -rw-------. 1 boincer umatlas    839680 Jul 27 21:51 result.tar.gz
21:51:20 (1995235): run_atlas exited; CPU time 38042.100276
21:51:20 (1995235): called boinc_finish(0)

</stderr_txt>
]]>

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