Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:02 (25540): wrapper (7.7.26015): starting
14:35:02 (25540): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 14:35:02] Arguments: --nthreads 8
[2025-07-28 14:35:02] Threads: 8
[2025-07-28 14:35:02] Checking for CVMFS
[2025-07-28 14:35:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:35:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:35:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:35:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:35:04] 2.11.2.0 6428 110963 139396 148848 3 109 22540219 25165825 4099 130560 0 85101845 99.874 52914137 3584 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 14:35:04] CVMFS is ok
[2025-07-28 14:35:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:35:04] Checking for apptainer binary...
[2025-07-28 14:35:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:35:04] Running /usr/bin/apptainer --version
[2025-07-28 14:35:04] apptainer version 1.3.2-1.el7
[2025-07-28 14:35:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:35:05] cg-vwn335.simple-grid.lan
[2025-07-28 14:35:05] apptainer works
[2025-07-28 14:35:05] Set ATHENA_PROC_NUMBER=8
[2025-07-28 14:35:05] Set ATHENA_CORE_NUMBER=8
[2025-07-28 14:35:05] Starting ATLAS job with PandaID=6747525053
[2025-07-28 14:35:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 19:00:27]  *** The last 200 lines of the pilot log: ***
[2025-07-28 19:00:27] 2025-07-28 17:00:06,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 19:00:27] 2025-07-28 17:00:06,767 | INFO     | fitting pss+swap vs Time
[2025-07-28 19:00:27] 2025-07-28 17:00:06,768 | INFO     | sum of square deviations: 5449944045.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,770 | INFO     | sum of deviations: -25622205638.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,771 | INFO     | mean x: 1753714079.5
[2025-07-28 19:00:27] 2025-07-28 17:00:06,771 | INFO     | mean y: 2513023.6384615386
[2025-07-28 19:00:27] 2025-07-28 17:00:06,771 | INFO     | -- intersect: 8247372494.522236
[2025-07-28 19:00:27] 2025-07-28 17:00:06,771 | INFO     | intersect: 8247372494.522236
[2025-07-28 19:00:27] 2025-07-28 17:00:06,772 | INFO     | chi2: 2.4875871117092423
[2025-07-28 19:00:27] 2025-07-28 17:00:06,772 | INFO     | sum of square deviations: 5141528960.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,775 | INFO     | sum of deviations: -7816023573.999999
[2025-07-28 19:00:27] 2025-07-28 17:00:06,775 | INFO     | mean x: 1753713927.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,775 | INFO     | mean y: 2521695.3529411764
[2025-07-28 19:00:27] 2025-07-28 17:00:06,775 | INFO     | -- intersect: 2668473691.75755
[2025-07-28 19:00:27] 2025-07-28 17:00:06,775 | INFO     | intersect: 2668473691.75755
[2025-07-28 19:00:27] 2025-07-28 17:00:06,776 | INFO     | chi2: 1.721675328754121
[2025-07-28 19:00:27] 2025-07-28 17:00:06,776 | INFO     | current chi2=1.721675328754121 (change=30.789345199206174 %)
[2025-07-28 19:00:27] 2025-07-28 17:00:06,776 | INFO     | sum of square deviations: 4844974562.5
[2025-07-28 19:00:27] 2025-07-28 17:00:06,779 | INFO     | sum of deviations: -7545044859.999993
[2025-07-28 19:00:27] 2025-07-28 17:00:06,779 | INFO     | mean x: 1753713774.5
[2025-07-28 19:00:27] 2025-07-28 17:00:06,779 | INFO     | mean y: 2521834.712
[2025-07-28 19:00:27] 2025-07-28 17:00:06,779 | INFO     | -- intersect: 2733567979.4361935
[2025-07-28 19:00:27] 2025-07-28 17:00:06,779 | INFO     | intersect: 2733567979.4361935
[2025-07-28 19:00:27] 2025-07-28 17:00:06,780 | INFO     | chi2: 1.7214125724413725
[2025-07-28 19:00:27] 2025-07-28 17:00:06,780 | INFO     | current chi2=1.7214125724413725 (change=0.015261664517129212 %)
[2025-07-28 19:00:27] 2025-07-28 17:00:06,780 | INFO     | right removable region: 249
[2025-07-28 19:00:27] 2025-07-28 17:00:06,781 | INFO     | sum of square deviations: 5141528960.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,783 | INFO     | sum of deviations: -67147711882.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,783 | INFO     | mean x: 1753714232.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,783 | INFO     | mean y: 2533390.933333333
[2025-07-28 19:00:27] 2025-07-28 17:00:06,783 | INFO     | -- intersect: 22905817392.604874
[2025-07-28 19:00:27] 2025-07-28 17:00:06,783 | INFO     | intersect: 22905817392.604874
[2025-07-28 19:00:27] 2025-07-28 17:00:06,784 | INFO     | chi2: 0.9893054230945604
[2025-07-28 19:00:27] 2025-07-28 17:00:06,784 | INFO     | current chi2=0.9893054230945604 (change=60.23032044032419 %)
[2025-07-28 19:00:27] 2025-07-28 17:00:06,785 | INFO     | sum of square deviations: 4844974562.5
[2025-07-28 19:00:27] 2025-07-28 17:00:06,787 | INFO     | sum of deviations: -62810618592.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,787 | INFO     | mean x: 1753714384.5
[2025-07-28 19:00:27] 2025-07-28 17:00:06,787 | INFO     | mean y: 2531140.08
[2025-07-28 19:00:27] 2025-07-28 17:00:06,787 | INFO     | -- intersect: 22737817755.763557
[2025-07-28 19:00:27] 2025-07-28 17:00:06,787 | INFO     | intersect: 22737817755.763557
[2025-07-28 19:00:27] 2025-07-28 17:00:06,788 | INFO     | chi2: 0.9789575397808592
[2025-07-28 19:00:27] 2025-07-28 17:00:06,788 | INFO     | current chi2=0.9789575397808592 (change=1.0459745870322699 %)
[2025-07-28 19:00:27] 2025-07-28 17:00:06,788 | INFO     | left removable region: 20
[2025-07-28 19:00:27] 2025-07-28 17:00:06,789 | INFO     | sum of square deviations: 3723716330.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,791 | INFO     | sum of deviations: -28291864233.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,791 | INFO     | mean x: 1753714354.0
[2025-07-28 19:00:27] 2025-07-28 17:00:06,791 | INFO     | mean y: 2531863.9694323144
[2025-07-28 19:00:27] 2025-07-28 17:00:06,791 | INFO     | -- intersect: 13326814384.392061
[2025-07-28 19:00:27] 2025-07-28 17:00:06,791 | INFO     | intersect: 13326814384.392061
[2025-07-28 19:00:27] 2025-07-28 17:00:06,792 | INFO     | chi2: 0.15744543810365896
[2025-07-28 19:00:27] 2025-07-28 17:00:06,792 | INFO     | -- intersect: 13326814384.392061
[2025-07-28 19:00:27] 2025-07-28 17:00:06,792 | INFO     | current memory leak: -7.60 B/s (using 229 data points, chi2=0.16)
[2025-07-28 19:00:27] 2025-07-28 17:00:06,793 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-28 19:00:27] 2025-07-28 17:00:06,793 | INFO     | ..............................
[2025-07-28 19:00:27] 2025-07-28 17:00:06,793 | INFO     | . Timing measurements:
[2025-07-28 19:00:27] 2025-07-28 17:00:06,793 | INFO     | . get job = 0 s
[2025-07-28 19:00:27] 2025-07-28 17:00:06,793 | INFO     | . initial setup = 2 s
[2025-07-28 19:00:27] 2025-07-28 17:00:06,793 | INFO     | . payload setup = 13 s
[2025-07-28 19:00:27] 2025-07-28 17:00:06,793 | INFO     | . stage-in = 0 s
[2025-07-28 19:00:27] 2025-07-28 17:00:06,794 | INFO     | . payload execution = 15830 s
[2025-07-28 19:00:27] 2025-07-28 17:00:06,794 | INFO     | . stage-out = 1 s
[2025-07-28 19:00:27] 2025-07-28 17:00:06,794 | INFO     | . log creation = 0 s
[2025-07-28 19:00:27] 2025-07-28 17:00:06,794 | INFO     | ..............................
[2025-07-28 19:00:27] 2025-07-28 17:00:07,002 | INFO     | 
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | job summary report
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | --------------------------------------------------
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | PanDA job id: 6747525053
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | task id: 45743349
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | errors: (none)
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | pilot state: finished 
[2025-07-28 19:00:27] 2025-07-28 17:00:07,003 | INFO     | transexitcode: 0
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | exeerrorcode: 0
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | exeerrordiag: 
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | exitcode: 0
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | exitmsg: OK
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | cpuconsumptiontime: 63512 s
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | nevents: 400
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | neventsw: 0
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | pid: 3695
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | pgrp: 3695
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | corecount: 8
[2025-07-28 19:00:27] 2025-07-28 17:00:07,004 | INFO     | event service: False
[2025-07-28 19:00:27] 2025-07-28 17:00:07,005 | INFO     | sizes: {0: 2396646, 1: 2397502, 2: 2397502, 8: 2397792, 13: 2397820, 15847: 2428872, 15850: 2432304, 15852: 2432360, 15859: 2432554}
[2025-07-28 19:00:27] 2025-07-28 17:00:07,005 | INFO     | --------------------------------------------------
[2025-07-28 19:00:27] 2025-07-28 17:00:07,005 | INFO     | 
[2025-07-28 19:00:27] 2025-07-28 17:00:07,005 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-28 19:00:27] 2025-07-28 17:00:07,027 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 19:00:27] 2025-07-28 17:00:07,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 19:00:27] 2025-07-28 17:00:07,030 | INFO     | job 6747525053 has completed (purged errors)
[2025-07-28 19:00:27] 2025-07-28 17:00:07,030 | INFO     | overall cleanup function is called
[2025-07-28 19:00:27] 2025-07-28 17:00:07,976 | INFO     | PID=29548 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 19:00:27] 2025-07-28 17:00:07,976 | INFO     | .. there are 6 such processes running
[2025-07-28 19:00:27] 2025-07-28 17:00:08,037 | INFO     | --- collectZombieJob: --- 10, [3695]
[2025-07-28 19:00:27] 2025-07-28 17:00:08,038 | INFO     | zombie collector waiting for pid 3695
[2025-07-28 19:00:27] 2025-07-28 17:00:08,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 19:00:27] 2025-07-28 17:00:08,038 | INFO     | collected zombie processes
[2025-07-28 19:00:27] 2025-07-28 17:00:08,038 | INFO     | will attempt to kill all subprocesses of pid=3695
[2025-07-28 19:00:27] 2025-07-28 17:00:08,115 | INFO     | process IDs to be killed: [3695] (in reverse order)
[2025-07-28 19:00:27] 2025-07-28 17:00:08,202 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 19:00:27] 2025-07-28 17:00:08,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 19:00:27] 2025-07-28 17:00:08,205 | INFO     | did not find any defunct processes belonging to 3695
[2025-07-28 19:00:27] 2025-07-28 17:00:08,208 | INFO     | did not find any defunct processes belonging to 3695
[2025-07-28 19:00:27] 2025-07-28 17:00:08,208 | INFO     | ready for new job
[2025-07-28 19:00:27] 2025-07-28 17:00:08,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 19:00:27] 2025-07-28 17:00:08,210 | INFO     | ***************************************
[2025-07-28 19:00:27] 2025-07-28 17:00:08,211 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 19:00:27] 2025-07-28 17:00:08,211 | INFO     | ***************************************
[2025-07-28 19:00:27] 2025-07-28 17:00:08,211 | INFO     | 
[2025-07-28 19:00:27] 2025-07-28 17:00:08,212 | INFO     | pilot is running in a VM
[2025-07-28 19:00:27] 2025-07-28 17:00:08,212 | INFO     | architecture information:
[2025-07-28 19:00:27] 2025-07-28 17:00:08,212 | INFO     | executing command: cat /etc/os-release
[2025-07-28 19:00:27] 2025-07-28 17:00:08,238 | INFO     | cat /etc/os-release:
[2025-07-28 19:00:27] NAME="CentOS Linux"
[2025-07-28 19:00:27] VERSION="7 (Core)"
[2025-07-28 19:00:27] ID="centos"
[2025-07-28 19:00:27] ID_LIKE="rhel fedora"
[2025-07-28 19:00:27] VERSION_ID="7"
[2025-07-28 19:00:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 19:00:27] ANSI_COLOR="0;31"
[2025-07-28 19:00:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 19:00:27] HOME_URL="https://www.centos.org/"
[2025-07-28 19:00:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 19:00:27] 
[2025-07-28 19:00:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 19:00:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 19:00:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 19:00:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 19:00:27] 
[2025-07-28 19:00:27] 2025-07-28 17:00:08,238 | INFO     | ***************************************
[2025-07-28 19:00:27] 2025-07-28 17:00:08,741 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-28 19:00:27] 2025-07-28 17:00:08,778 | INFO     | sufficient remaining disk space (497550360576 B)
[2025-07-28 19:00:27] 2025-07-28 17:00:08,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 19:00:27] 2025-07-28 17:00:08,779 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 19:00:27] 2025-07-28 17:00:08,779 | INFO     | update_server=False
[2025-07-28 19:00:27] 2025-07-28 17:00:08,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 19:00:27] 2025-07-28 17:00:08,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:00:27] 2025-07-28 17:00:08,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 19:00:27] 2025-07-28 17:00:08,781 | INFO     | aborting loop
[2025-07-28 19:00:27] 2025-07-28 17:00:08,781 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 19:00:27] 2025-07-28 17:00:08,782 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 19:00:27] 2025-07-28 17:00:08,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 19:00:27] 2025-07-28 17:00:08,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 19:00:27] 2025-07-28 17:00:08,856 | INFO     | all job control threads have been joined
[2025-07-28 19:00:27] 2025-07-28 17:00:09,275 | INFO     | all data control threads have been joined
[2025-07-28 19:00:27] 2025-07-28 17:00:09,591 | INFO     | all payload control threads have been joined
[2025-07-28 19:00:27] 2025-07-28 17:00:09,785 | INFO     | [job] retrieve thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:09,786 | INFO     | [job] queue monitor thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:09,787 | INFO     | [job] job monitor thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:09,862 | INFO     | [job] control thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,137 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 19:00:27] 2025-07-28 17:00:10,238 | INFO     | [payload] validate_post thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,244 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 19:00:27] 2025-07-28 17:00:10,279 | INFO     | [data] control thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,314 | INFO     | [job] validate thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,370 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,419 | INFO     | [payload] failed_post thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,525 | INFO     | [data] copytool_in thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:10,592 | INFO     | [payload] control thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:12,283 | INFO     | [data] copytool_out thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:14,187 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:19,350 | INFO     | job.realtimelogging is not enabled
[2025-07-28 19:00:27] 2025-07-28 17:00:20,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 19:00:27] 2025-07-28 17:00:21,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820447496000)>', '<ExcThread(monitor, started 139819992717056)>']
[2025-07-28 19:00:27] 2025-07-28 17:00:21,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 19:00:27] 2025-07-28 17:00:21,849 | INFO     | [monitor] control thread has ended
[2025-07-28 19:00:27] 2025-07-28 17:00:26,723 | INFO     | all workflow threads have been joined
[2025-07-28 19:00:27] 2025-07-28 17:00:26,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 19:00:27] 2025-07-28 17:00:26,724 | INFO     | traces error code: 0
[2025-07-28 19:00:27] 2025-07-28 17:00:26,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 19:00:27] 2025-07-28 17:00:26,924 [wrapper] ==== pilot stdout END ====
[2025-07-28 19:00:27] 2025-07-28 17:00:26,929 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 19:00:27] 2025-07-28 17:00:26,933 [wrapper] pilotpid: 29548
[2025-07-28 19:00:27] 2025-07-28 17:00:26,937 [wrapper] Pilot exit status: 0
[2025-07-28 19:00:27] 2025-07-28 17:00:26,956 [wrapper] pandaids: 6747525053
[2025-07-28 19:00:27] 2025-07-28 17:00:27,004 [wrapper] cleanup supervisor_pilot  5118 29549
[2025-07-28 19:00:27] 2025-07-28 17:00:27,014 [wrapper] Test setup, not cleaning
[2025-07-28 19:00:27] 2025-07-28 17:00:27,020 [wrapper] apfmon messages muted
[2025-07-28 19:00:27] 2025-07-28 17:00:27,028 [wrapper] ==== wrapper stdout END ====
[2025-07-28 19:00:27] 2025-07-28 17:00:27,036 [wrapper] ==== wrapper stderr END ====
[2025-07-28 19:00:27]  *** Error codes and diagnostics ***
[2025-07-28 19:00:27]     "exeErrorCode": 0,
[2025-07-28 19:00:27]     "exeErrorDiag": "",
[2025-07-28 19:00:27]     "pilotErrorCode": 0,
[2025-07-28 19:00:27]     "pilotErrorDiag": "",
[2025-07-28 19:00:27]  *** Listing of results directory ***
[2025-07-28 19:00:27] total 437736
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc    530466 Jul 27 17:40 pilot3.tar.gz
[2025-07-28 19:00:27] -rwx------. 1 boinc boinc     36292 Jul 27 17:55 runpilot2-wrapper.sh
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc      5112 Jul 27 17:55 queuedata.json
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc       100 Jul 28 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 19:00:27] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 14:35 run_atlas
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc       105 Jul 28 14:35 job.xml
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc      6391 Jul 28 14:35 init_data.xml
[2025-07-28 19:00:27] -rw-r--r--. 2 boinc boinc 231039760 Jul 28 14:35 EVNT.45743347._002836.pool.root.1
[2025-07-28 19:00:27] -rw-r--r--. 2 boinc boinc     15095 Jul 28 14:35 start_atlas.sh
[2025-07-28 19:00:27] drwxrwx--x. 2 boinc boinc        68 Jul 28 14:35 shared
[2025-07-28 19:00:27] -rw-r--r--. 2 boinc boinc    542893 Jul 28 14:35 input.tar.gz
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc         0 Jul 28 14:35 boinc_lockfile
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc      2562 Jul 28 14:35 pandaJob.out
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc    977006 Jul 28 14:35 agis_schedconf.cvmfs.json
[2025-07-28 19:00:27] drwx------. 4 boinc boinc      4096 Jul 28 14:35 pilot3
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc 209794173 Jul 28 18:59 HITS.45743349._051966.pool.root.1
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc        95 Jul 28 18:59 pilot_heartbeat.json
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc       531 Jul 28 18:59 boinc_task_state.xml
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc      1018 Jul 28 18:59 memory_monitor_summary.json
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc   1589827 Jul 28 18:59 agis_ddmendpoints.agis.ALL.json
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc    404756 Jul 28 18:59 log.45743349._051966.job.log.tgz.1
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc      7779 Jul 28 19:00 heartbeat.json
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc      8192 Jul 28 19:00 boinc_mmap_file
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc        28 Jul 28 19:00 wrapper_checkpoint.txt
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc      4615 Jul 28 19:00 pilotlog.txt
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc   1364505 Jul 28 19:00 log.45743349._051966.job.log.1
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc       357 Jul 28 19:00 output.list
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc       620 Jul 28 19:00 runtime_log
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc   1792000 Jul 28 19:00 result.tar.gz
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc      8660 Jul 28 19:00 runtime_log.err
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc       657 Jul 28 19:00 rLEODmdtI07n9Rq4apOajLDm4fhM0noT9bVof3QYDmLl2KDmvPkxmn.diag
[2025-07-28 19:00:27] -rw-r--r--. 1 boinc boinc     20596 Jul 28 19:00 stderr.txt
[2025-07-28 19:00:27] HITS file was successfully produced:
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc 209794173 Jul 28 18:59 shared/HITS.pool.root.1
[2025-07-28 19:00:27]  *** Contents of shared directory: ***
[2025-07-28 19:00:27] total 432808
[2025-07-28 19:00:27] -rw-r--r--. 2 boinc boinc 231039760 Jul 28 14:35 ATLAS.root_0
[2025-07-28 19:00:27] -rw-r--r--. 2 boinc boinc     15095 Jul 28 14:35 start_atlas.sh
[2025-07-28 19:00:27] -rw-r--r--. 2 boinc boinc    542893 Jul 28 14:35 input.tar.gz
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc 209794173 Jul 28 18:59 HITS.pool.root.1
[2025-07-28 19:00:27] -rw-------. 1 boinc boinc   1792000 Jul 28 19:00 result.tar.gz
19:00:28 (25540): run_atlas exited; CPU time 63693.623168
19:00:28 (25540): called boinc_finish(0)

</stderr_txt>
]]>

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