Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:06 (2056112): wrapper (7.7.26015): starting
16:46:06 (2056112): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 16:46:06] Arguments: --nthreads 12
[2025-07-27 16:46:06] Threads: 12
[2025-07-27 16:46:06] Checking for CVMFS
[2025-07-27 16:46:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:46:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:46:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:46:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:46:07] 2.11.5.0 6895 37822 258644 148828 2 454 44931436 45568001 8407 130560 0 311420480 99.762 210574052 26503 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-27 16:46:07] CVMFS is ok
[2025-07-27 16:46:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:46:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:46:07] Further information can be found at the LHC@home message board.
[2025-07-27 16:46:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:46:07] Checking for apptainer binary...
[2025-07-27 16:46:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:46:07] Running /usr/bin/apptainer --version
[2025-07-27 16:46:07] apptainer version 1.4.1-1.el9
[2025-07-27 16:46:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:46:07] wns0049.triumf.lcg
[2025-07-27 16:46:07] apptainer works
[2025-07-27 16:46:07] Set ATHENA_PROC_NUMBER=12
[2025-07-27 16:46:07] Set ATHENA_CORE_NUMBER=12
[2025-07-27 16:46:07] Starting ATLAS job with PandaID=6748122118
[2025-07-27 16:46:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:49:26]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | found no stored workdir sizes
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | wrong length of table data, x=[1753659998.0], y=[810.0] (must be same and length>=4)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | INFO     | could have reported an average CPU frequency of 2466 MHz (4 samples)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | ..............................
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . Timing measurements:
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . get job = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . initial setup = 2 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . payload setup = 4 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . stage-in = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . payload execution = 14 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . stage-out = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . log creation = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | ..............................
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748122118/pilotlog.txt
[2025-07-27 16:49:26] 2025-07-27 23:48:53,474 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 16:49:26] - Log from pilotlog.txt -
[2025-07-27 16:49:26] 2025-07-27 23:48:53,462 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:49:26] 2025-07-27 23:48:53,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | found no stored workdir sizes
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | wrong length of table data, x=[1753659998.0], y=[810.0] (must be same and length>=4)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | INFO     | could have reported an average CPU frequency of 2466 MHz (4 samples)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | ..............................
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . Timing measurements:
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . get job = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . initial setup = 2 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . payload setup = 4 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . stage-in = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . payload execution = 14 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . stage-out = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . log creation = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | ..............................
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748122118/pilotlog.txt
[2025-07-27 16:49:26] 2025-07-27 23:48:53,474 | WARNING  | 
[2025-07-27 16:49:26] [begin log extracts]
[2025-07-27 16:49:26] - Log from pilotlog.txt -
[2025-07-27 16:49:26] 2025-07-27 23:48:53,462 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:49:26] 2025-07-27 23:48:53,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | found no stored workdir sizes
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | WARNING  | wrong length of table data, x=[1753659998.0], y=[810.0] (must be same and length>=4)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,463 | INFO     | could have reported an average CPU frequency of 2466 MHz (4 samples)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | ..............................
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . Timing measurements:
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . get job = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . initial setup = 2 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . payload setup = 4 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . stage-in = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . payload execution = 14 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . stage-out = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | . log creation = 0 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | ..............................
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 16:49:26] 2025-07-27 23:48:53,464 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6748122118/pilotlog.txt
[2025-07-27 16:49:26] [end log extracts]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,475 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,475 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 16:49:26] 2025-07-27 23:48:53,681 | INFO     | 
[2025-07-27 16:49:26] 2025-07-27 23:48:53,681 | INFO     | job summary report
[2025-07-27 16:49:26] 2025-07-27 23:48:53,681 | INFO     | --------------------------------------------------
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | PanDA job id: 6748122118
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | task id: 45758961
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 16:46:44,999 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | pilot state: failed 
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | transexitcode: 65
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | exeerrorcode: 65
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | exitcode: 65
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | cpuconsumptiontime: 17 s
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | nevents: 0
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | neventsw: 0
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | pid: 2065998
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | pgrp: 2065998
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | corecount: 12
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | event service: False
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | sizes: {0: 2397542, 3: 2397804, 11: 2397832, 22: 2425320, 24: 2425320, 143: 2425486}
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | --------------------------------------------------
[2025-07-27 16:49:26] 2025-07-27 23:48:53,682 | INFO     | 
[2025-07-27 16:49:26] 2025-07-27 23:48:53,683 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 16:49:26] 2025-07-27 23:48:53,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:49:26] 2025-07-27 23:48:53,698 | INFO     | job 6748122118 has completed (purged errors)
[2025-07-27 16:49:26] 2025-07-27 23:48:53,698 | INFO     | overall cleanup function is called
[2025-07-27 16:49:26] 2025-07-27 23:48:54,703 | INFO     | --- collectZombieJob: --- 10, [2065998]
[2025-07-27 16:49:26] 2025-07-27 23:48:54,704 | INFO     | zombie collector waiting for pid 2065998
[2025-07-27 16:49:26] 2025-07-27 23:48:54,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:49:26] 2025-07-27 23:48:54,704 | INFO     | collected zombie processes
[2025-07-27 16:49:26] 2025-07-27 23:48:54,704 | INFO     | will attempt to kill all subprocesses of pid=2065998
[2025-07-27 16:49:26] 2025-07-27 23:48:54,827 | INFO     | process IDs to be killed: [2065998] (in reverse order)
[2025-07-27 16:49:26] 2025-07-27 23:48:54,874 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:49:26] 2025-07-27 23:48:54,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:49:26] 2025-07-27 23:48:54,880 | INFO     | did not find any defunct processes belonging to 2065998
[2025-07-27 16:49:26] 2025-07-27 23:48:54,885 | INFO     | did not find any defunct processes belonging to 2065998
[2025-07-27 16:49:26] 2025-07-27 23:48:54,885 | INFO     | ready for new job
[2025-07-27 16:49:26] 2025-07-27 23:48:54,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:49:26] 2025-07-27 23:48:54,886 | INFO     | ***************************************
[2025-07-27 16:49:26] 2025-07-27 23:48:54,886 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:49:26] 2025-07-27 23:48:54,886 | INFO     | ***************************************
[2025-07-27 16:49:26] 2025-07-27 23:48:54,886 | INFO     | 
[2025-07-27 16:49:26] 2025-07-27 23:48:54,888 | INFO     | architecture information:
[2025-07-27 16:49:26] 2025-07-27 23:48:54,889 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:49:26] 2025-07-27 23:48:54,900 | INFO     | cat /etc/os-release:
[2025-07-27 16:49:26] NAME="CentOS Linux"
[2025-07-27 16:49:26] VERSION="7 (Core)"
[2025-07-27 16:49:26] ID="centos"
[2025-07-27 16:49:26] ID_LIKE="rhel fedora"
[2025-07-27 16:49:26] VERSION_ID="7"
[2025-07-27 16:49:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:49:26] ANSI_COLOR="0;31"
[2025-07-27 16:49:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:49:26] HOME_URL="https://www.centos.org/"
[2025-07-27 16:49:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:49:26] 
[2025-07-27 16:49:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:49:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:49:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:49:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:49:26] 
[2025-07-27 16:49:26] 2025-07-27 23:48:54,900 | INFO     | ***************************************
[2025-07-27 16:49:26] 2025-07-27 23:48:55,403 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 16:49:26] 2025-07-27 23:48:55,413 | INFO     | sufficient remaining disk space (2069965570048 B)
[2025-07-27 16:49:26] 2025-07-27 23:48:55,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:49:26] 2025-07-27 23:48:55,414 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:49:26] 2025-07-27 23:48:55,414 | INFO     | update_server=False
[2025-07-27 16:49:26] 2025-07-27 23:48:55,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:49:26] 2025-07-27 23:48:55,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:49:26] 2025-07-27 23:48:55,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:49:26] 2025-07-27 23:48:55,485 | INFO     | all data control threads have been joined
[2025-07-27 16:49:26] 2025-07-27 23:48:55,811 | INFO     | all job control threads have been joined
[2025-07-27 16:49:26] 2025-07-27 23:48:56,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:49:26] 2025-07-27 23:48:56,122 | INFO     | aborting loop
[2025-07-27 16:49:26] 2025-07-27 23:48:56,418 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:56,419 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:56,490 | INFO     | [data] control thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:56,509 | INFO     | all payload control threads have been joined
[2025-07-27 16:49:26] 2025-07-27 23:48:56,532 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:56,566 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:56,749 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:56,816 | INFO     | [job] control thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:56,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:49:26] 2025-07-27 23:48:57,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:57,126 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:57,419 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:57,429 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:57,515 | INFO     | [payload] control thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:57,739 | INFO     | [job] validate thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:57,806 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:48:57,884 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:49:00,919 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:49:26] 2025-07-27 23:49:02,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895427098432)>', '<ExcThread(monitor, started 139894668130048)>']
[2025-07-27 16:49:26] 2025-07-27 23:49:07,268 | INFO     | all workflow threads have been joined
[2025-07-27 16:49:26] 2025-07-27 23:49:07,268 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:49:26] 2025-07-27 23:49:07,268 | INFO     | traces error code: 0
[2025-07-27 16:49:26] 2025-07-27 23:49:07,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:49:26] 2025-07-27 23:49:25,891 | INFO     | PID=2059685 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:49:26] 2025-07-27 23:49:25,892 | INFO     | .. there are 8 such processes running
[2025-07-27 16:49:26] 2025-07-27 23:49:25,892 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:49:26] 2025-07-27 23:49:25,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:49:26] 2025-07-27 23:49:25,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:49:26] 2025-07-27 23:49:25,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:49:26] 2025-07-27 23:49:25,893 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 16:49:26] 2025-07-27 23:49:25,893 | INFO     | [monitor] control thread has ended
[2025-07-27 16:49:26] 2025-07-27 23:49:26,028 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:49:26] 2025-07-27 23:49:26,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:49:26] 2025-07-27 23:49:26,032 [wrapper] pilotpid: 2059685
[2025-07-27 16:49:26] 2025-07-27 23:49:26,034 [wrapper] Pilot exit status: 0
[2025-07-27 16:49:26] 2025-07-27 23:49:26,040 [wrapper] pandaids: 6748122118
[2025-07-27 16:49:26] 2025-07-27 23:49:26,070 [wrapper] cleanup supervisor_pilot 2059691 2059686
[2025-07-27 16:49:26] 2025-07-27 23:49:26,072 [wrapper] Test setup, not cleaning
[2025-07-27 16:49:26] 2025-07-27 23:49:26,074 [wrapper] apfmon messages muted
[2025-07-27 16:49:26] 2025-07-27 23:49:26,076 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:49:26] 2025-07-27 23:49:26,078 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:49:26]  *** Error codes and diagnostics ***
[2025-07-27 16:49:26]     "exeErrorCode": 65,
[2025-07-27 16:49:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 16:49:26]     "pilotErrorCode": 1305,
[2025-07-27 16:49:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 16:49:26]  *** Listing of results directory ***
[2025-07-27 16:49:26] total 236044
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc    530466 Jul 27 13:58 pilot3.tar.gz
[2025-07-27 16:49:26] -rwx------. 1 boinc boinc     36292 Jul 27 14:05 runpilot2-wrapper.sh
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc      5112 Jul 27 14:05 queuedata.json
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc       100 Jul 27 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:49:26] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 16:46 run_atlas
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc       105 Jul 27 16:46 job.xml
[2025-07-27 16:49:26] -rw-r--r--. 2 boinc boinc 237641278 Jul 27 16:46 EVNT.45758956._000004.pool.root.1
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc      6595 Jul 27 16:46 init_data.xml
[2025-07-27 16:49:26] -rw-r--r--. 2 boinc boinc     15095 Jul 27 16:46 start_atlas.sh
[2025-07-27 16:49:26] drwxrwx--x. 2 boinc boinc      4096 Jul 27 16:46 shared
[2025-07-27 16:49:26] -rw-r--r--. 2 boinc boinc    542903 Jul 27 16:46 input.tar.gz
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc         0 Jul 27 16:46 boinc_lockfile
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc      2638 Jul 27 16:46 pandaJob.out
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc    980125 Jul 27 16:46 agis_schedconf.cvmfs.json
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc   1593052 Jul 27 16:46 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:49:26] drwx------. 4 boinc boinc      4096 Jul 27 16:46 pilot3
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc       960 Jul 27 16:46 memory_monitor_summary.json
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc       522 Jul 27 16:46 boinc_task_state.xml
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc     20620 Jul 27 16:46 log.45758961._000096.job.log.tgz.1
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc      8374 Jul 27 16:48 heartbeat.json
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc      8192 Jul 27 16:49 boinc_mmap_file
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc        22 Jul 27 16:49 wrapper_checkpoint.txt
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc        95 Jul 27 16:49 pilot_heartbeat.json
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc       892 Jul 27 16:49 pilotlog.txt
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc     74485 Jul 27 16:49 log.45758961._000096.job.log.1
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc       188 Jul 27 16:49 output.list
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc       620 Jul 27 16:49 runtime_log
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc    112640 Jul 27 16:49 result.tar.gz
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc      8485 Jul 27 16:49 runtime_log.err
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc       644 Jul 27 16:49 PfQKDmjjN07n9Rq4apOajLDm4fhM0noT9bVof3QYDmf72KDmOWYrAo.diag
[2025-07-27 16:49:26] -rw-r--r--. 1 boinc boinc     21614 Jul 27 16:49 stderr.txt
[2025-07-27 16:49:26] No HITS result produced
[2025-07-27 16:49:26]  *** Contents of shared directory: ***
[2025-07-27 16:49:26] total 232736
[2025-07-27 16:49:26] -rw-r--r--. 2 boinc boinc 237641278 Jul 27 16:46 ATLAS.root_0
[2025-07-27 16:49:26] -rw-r--r--. 2 boinc boinc     15095 Jul 27 16:46 start_atlas.sh
[2025-07-27 16:49:26] -rw-r--r--. 2 boinc boinc    542903 Jul 27 16:46 input.tar.gz
[2025-07-27 16:49:26] -rw-------. 1 boinc boinc    112640 Jul 27 16:49 result.tar.gz
16:49:27 (2056112): run_atlas exited; CPU time 19.027085
16:49:27 (2056112): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN