Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:51 (20291): wrapper (7.7.26015): starting
19:46:51 (20291): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 19:46:51] Arguments: --nthreads 12
[2025-07-27 19:46:51] Threads: 12
[2025-07-27 19:46:51] Checking for CVMFS
[2025-07-27 19:46:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:46:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:46:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:46:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:46:51] 2.11.2.0 2998 112634 101692 148828 3 57 14744030 20275200 1 130560 0 39011953 99.972 9739431 11023 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:46:51] CVMFS is ok
[2025-07-27 19:46:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:46:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:46:51] Further information can be found at the LHC@home message board.
[2025-07-27 19:46:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:46:51] Checking for apptainer binary...
[2025-07-27 19:46:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:46:51] Running /usr/bin/apptainer --version
[2025-07-27 19:46:51] apptainer version 1.3.2-1.el7
[2025-07-27 19:46:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:46:53] c-205-25.aglt2.org
[2025-07-27 19:46:53] apptainer works
[2025-07-27 19:46:53] Set ATHENA_PROC_NUMBER=12
[2025-07-27 19:46:53] Set ATHENA_CORE_NUMBER=12
[2025-07-27 19:46:53] Starting ATLAS job with PandaID=6747500243
[2025-07-27 19:46:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:11:14]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:11:14]  is_tar=False
[2025-07-27 21:11:14]  lfn=log.45743349._051615.job.log.tgz.1
[2025-07-27 21:11:14]  mtime=0
[2025-07-27 21:11:14]  protocol_id=None
[2025-07-27 21:11:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 21:11:14]  replicas=None
[2025-07-27 21:11:14]  scope=mc23_13p6TeV
[2025-07-27 21:11:14]  status=None
[2025-07-27 21:11:14]  status_code=0
[2025-07-27 21:11:14]  storage_token=
[2025-07-27 21:11:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747500243/log.45743349._051615.job.log.tgz.1
[2025-07-27 21:11:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/54/log.45743349._051615.job.log.tgz.1
[2025-07-27 21:11:14]  workdir=None
[2025-07-27 21:11:14] ]
[2025-07-27 21:11:14] 2025-07-28 01:10:46,424 | INFO     | transferring file log.45743349._051615.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747500243/log.45743349._051615.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 21:11:14] 2025-07-28 01:10:46,424 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747500243/log.45743349._051615.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._051615.job
[2025-07-27 21:11:14] 2025-07-28 01:10:46,446 | INFO     | adding to output.list: log.45743349._051615.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/54/log.45743349._051615.job.log.tg
[2025-07-27 21:11:14] 2025-07-28 01:10:46,447 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:11:14] 2025-07-28 01:10:46,447 | INFO     | summary of transferred files:
[2025-07-27 21:11:14] 2025-07-28 01:10:46,447 | INFO     |  -- lfn=log.45743349._051615.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:11:14] 2025-07-28 01:10:46,448 | INFO     | stage-out finished correctly
[2025-07-27 21:11:14] 2025-07-28 01:10:47,651 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:11:14] 2025-07-28 01:10:47,711 | INFO     | monitor loop #375: job 0:6747500243 is in state 'finished'
[2025-07-27 21:11:14] 2025-07-28 01:10:47,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:11:14] 2025-07-28 01:10:50,188 | INFO     | job 6747500243 has state=finished
[2025-07-27 21:11:14] 2025-07-28 01:10:50,189 | INFO     | preparing for final server update for job 6747500243 in state='finished'
[2025-07-27 21:11:14] 2025-07-28 01:10:50,189 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:11:14] 2025-07-28 01:10:50,189 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:11:14] 2025-07-28 01:10:50,190 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:11:14] 2025-07-28 01:10:50,190 | INFO     | job 6747500243 has finished - writing final server update
[2025-07-27 21:11:14] 2025-07-28 01:10:50,190 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:11:14] 2025-07-28 01:10:50,191 | INFO     | executing command: lscpu
[2025-07-27 21:11:14] 2025-07-28 01:10:50,218 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:11:14] 2025-07-28 01:10:50,221 | INFO     | monitor loop #376: job 0:6747500243 is in state 'finished'
[2025-07-27 21:11:14] 2025-07-28 01:10:50,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:11:14] 2025-07-28 01:10:52,725 | INFO     | monitor loop #377: job 0:6747500243 is in state 'finished'
[2025-07-27 21:11:14] 2025-07-28 01:10:52,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:11:14] 2025-07-28 01:10:55,133 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 21:11:14] 2025-07-28 01:10:55,136 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-07-27 21:11:14] 2025-07-28 01:10:55,138 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747500243/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:11:14] 2025-07-28 01:10:55,139 | INFO     | extracted standard info from prmon json
[2025-07-27 21:11:14] 2025-07-28 01:10:55,139 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:11:14] 2025-07-28 01:10:55,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:11:14] 2025-07-28 01:10:55,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:11:14] 2025-07-28 01:10:55,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:11:14] 2025-07-28 01:10:55,141 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:11:14] 2025-07-28 01:10:55,141 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 21:11:14] 2025-07-28 01:10:55,141 | INFO     | sum of deviations: -6989896425.999999
[2025-07-27 21:11:14] 2025-07-28 01:10:55,142 | INFO     | mean x: 1753662619.0
[2025-07-27 21:11:14] 2025-07-28 01:10:55,142 | INFO     | mean y: 2752201.493333333
[2025-07-27 21:11:14] 2025-07-28 01:10:55,142 | INFO     | -- intersect: 93722645582.43796
[2025-07-27 21:11:14] 2025-07-28 01:10:55,142 | INFO     | intersect: 93722645582.43796
[2025-07-27 21:11:14] 2025-07-28 01:10:55,142 | INFO     | chi2: 0.11861016149702018
[2025-07-27 21:11:14] 2025-07-28 01:10:55,142 | INFO     | -- intersect: 93722645582.43796
[2025-07-27 21:11:14] 2025-07-28 01:10:55,142 | INFO     | current memory leak: -53.44 B/s (using 75 data points, chi2=0.12)
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | ..............................
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | . Timing measurements:
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | . get job = 0 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | . initial setup = 2 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | . payload setup = 9 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | . stage-in = 0 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,143 | INFO     | . payload execution = 4989 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,144 | INFO     | . stage-out = 0 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,144 | INFO     | . log creation = 0 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,144 | INFO     | ..............................
[2025-07-27 21:11:14] 2025-07-28 01:10:55,227 | INFO     | 
[2025-07-27 21:11:14] 2025-07-28 01:10:55,227 | INFO     | job summary report
[2025-07-27 21:11:14] 2025-07-28 01:10:55,233 | INFO     | --------------------------------------------------
[2025-07-27 21:11:14] 2025-07-28 01:10:55,233 | INFO     | PanDA job id: 6747500243
[2025-07-27 21:11:14] 2025-07-28 01:10:55,233 | INFO     | task id: 45743349
[2025-07-27 21:11:14] 2025-07-28 01:10:55,233 | INFO     | errors: (none)
[2025-07-27 21:11:14] 2025-07-28 01:10:55,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:11:14] 2025-07-28 01:10:55,234 | INFO     | pilot state: finished 
[2025-07-27 21:11:14] 2025-07-28 01:10:55,234 | INFO     | transexitcode: 0
[2025-07-27 21:11:14] 2025-07-28 01:10:55,234 | INFO     | exeerrorcode: 0
[2025-07-27 21:11:14] 2025-07-28 01:10:55,234 | INFO     | exeerrordiag: 
[2025-07-27 21:11:14] 2025-07-28 01:10:55,234 | INFO     | exitcode: 0
[2025-07-27 21:11:14] 2025-07-28 01:10:55,234 | INFO     | exitmsg: OK
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | cpuconsumptiontime: 52721 s
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | nevents: 400
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | neventsw: 0
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | pid: 30340
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | pgrp: 30340
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | corecount: 12
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | event service: False
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 5002: 2424072, 5003: 2424071, 5005: 2433125, 5006: 2433309, 5013: 2433503}
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | --------------------------------------------------
[2025-07-27 21:11:14] 2025-07-28 01:10:55,235 | INFO     | 
[2025-07-27 21:11:14] 2025-07-28 01:10:55,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 21:11:14] 2025-07-28 01:10:55,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,260 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:11:14] 2025-07-28 01:10:55,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:11:14] 2025-07-28 01:10:55,264 | INFO     | job 6747500243 has completed (purged errors)
[2025-07-27 21:11:14] 2025-07-28 01:10:55,264 | INFO     | overall cleanup function is called
[2025-07-27 21:11:14] 2025-07-28 01:10:56,272 | INFO     | --- collectZombieJob: --- 10, [30340]
[2025-07-27 21:11:14] 2025-07-28 01:10:56,272 | INFO     | zombie collector waiting for pid 30340
[2025-07-27 21:11:14] 2025-07-28 01:10:56,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:11:14] 2025-07-28 01:10:56,272 | INFO     | collected zombie processes
[2025-07-27 21:11:14] 2025-07-28 01:10:56,272 | INFO     | will attempt to kill all subprocesses of pid=30340
[2025-07-27 21:11:14] 2025-07-28 01:10:56,364 | INFO     | process IDs to be killed: [30340] (in reverse order)
[2025-07-27 21:11:14] 2025-07-28 01:10:56,419 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:11:14] 2025-07-28 01:10:56,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:11:14] 2025-07-28 01:10:56,421 | INFO     | did not find any defunct processes belonging to 30340
[2025-07-27 21:11:14] 2025-07-28 01:10:56,424 | INFO     | did not find any defunct processes belonging to 30340
[2025-07-27 21:11:14] 2025-07-28 01:10:56,424 | INFO     | ready for new job
[2025-07-27 21:11:14] 2025-07-28 01:10:56,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:11:14] 2025-07-28 01:10:56,425 | INFO     | ***************************************
[2025-07-27 21:11:14] 2025-07-28 01:10:56,425 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:11:14] 2025-07-28 01:10:56,425 | INFO     | ***************************************
[2025-07-27 21:11:14] 2025-07-28 01:10:56,425 | INFO     | 
[2025-07-27 21:11:14] 2025-07-28 01:10:56,426 | INFO     | architecture information:
[2025-07-27 21:11:14] 2025-07-28 01:10:56,426 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:11:14] 2025-07-28 01:10:56,442 | INFO     | cat /etc/os-release:
[2025-07-27 21:11:14] NAME="CentOS Linux"
[2025-07-27 21:11:14] VERSION="7 (Core)"
[2025-07-27 21:11:14] ID="centos"
[2025-07-27 21:11:14] ID_LIKE="rhel fedora"
[2025-07-27 21:11:14] VERSION_ID="7"
[2025-07-27 21:11:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:11:14] ANSI_COLOR="0;31"
[2025-07-27 21:11:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:11:14] HOME_URL="https://www.centos.org/"
[2025-07-27 21:11:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:11:14] 
[2025-07-27 21:11:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:11:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:11:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:11:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:11:14] 
[2025-07-27 21:11:14] 2025-07-28 01:10:56,442 | INFO     | ***************************************
[2025-07-27 21:11:14] 2025-07-28 01:10:56,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 21:11:14] 2025-07-28 01:10:56,962 | INFO     | sufficient remaining disk space (29351739392 B)
[2025-07-27 21:11:14] 2025-07-28 01:10:56,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:11:14] 2025-07-28 01:10:56,963 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:11:14] 2025-07-28 01:10:56,963 | INFO     | update_server=False
[2025-07-27 21:11:14] 2025-07-28 01:10:56,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:11:14] 2025-07-28 01:10:56,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:11:14] 2025-07-28 01:10:56,963 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 21:11:14] 2025-07-28 01:10:56,964 | INFO     | aborting loop
[2025-07-27 21:11:14] 2025-07-28 01:10:56,964 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:11:14] 2025-07-28 01:10:56,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:11:14] 2025-07-28 01:10:56,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:11:14] 2025-07-28 01:10:56,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:11:14] 2025-07-28 01:10:56,971 | INFO     | all job control threads have been joined
[2025-07-27 21:11:14] 2025-07-28 01:10:57,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:11:14] 2025-07-28 01:10:57,177 | INFO     | all data control threads have been joined
[2025-07-27 21:11:14] 2025-07-28 01:10:57,968 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:57,970 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:57,970 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:57,977 | INFO     | [job] control thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:58,182 | INFO     | [data] control thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:58,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:11:14] 2025-07-28 01:10:58,283 | INFO     | all payload control threads have been joined
[2025-07-27 21:11:14] 2025-07-28 01:10:58,299 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:58,317 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:58,749 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:58,879 | INFO     | [job] validate thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:58,881 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:59,052 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:59,276 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:59,277 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:10:59,289 | INFO     | [payload] control thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:11:02,248 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:11:07,678 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:11:14] 2025-07-28 01:11:08,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:11:14] 2025-07-28 01:11:08,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383908521792)>', '<ExcThread(monitor, started 140383463917312)>']
[2025-07-27 21:11:14] 2025-07-28 01:11:09,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:11:14] 2025-07-28 01:11:09,026 | INFO     | [monitor] control thread has ended
[2025-07-27 21:11:14] 2025-07-28 01:11:13,843 | INFO     | all workflow threads have been joined
[2025-07-27 21:11:14] 2025-07-28 01:11:13,843 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:11:14] 2025-07-28 01:11:13,844 | INFO     | traces error code: 0
[2025-07-27 21:11:14] 2025-07-28 01:11:13,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:11:14] 2025-07-28 01:11:13,934 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:11:14] 2025-07-28 01:11:13,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:11:14] 2025-07-28 01:11:13,942 [wrapper] pilotpid: 23931
[2025-07-27 21:11:14] 2025-07-28 01:11:13,945 [wrapper] Pilot exit status: 0
[2025-07-27 21:11:14] 2025-07-28 01:11:13,961 [wrapper] pandaids: 6747500243
[2025-07-27 21:11:14] 2025-07-28 01:11:14,000 [wrapper] cleanup supervisor_pilot 11570 23932
[2025-07-27 21:11:14] 2025-07-28 01:11:14,004 [wrapper] Test setup, not cleaning
[2025-07-27 21:11:14] 2025-07-28 01:11:14,008 [wrapper] apfmon messages muted
[2025-07-27 21:11:14] 2025-07-28 01:11:14,012 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:11:14] 2025-07-28 01:11:14,016 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:11:14]  *** Error codes and diagnostics ***
[2025-07-27 21:11:14]     "exeErrorCode": 0,
[2025-07-27 21:11:14]     "exeErrorDiag": "",
[2025-07-27 21:11:14]     "pilotErrorCode": 0,
[2025-07-27 21:11:14]     "pilotErrorDiag": "",
[2025-07-27 21:11:14]  *** Listing of results directory ***
[2025-07-27 21:11:14] total 431784
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 11:29 queuedata.json
[2025-07-27 21:11:14] -rwx------ 1 boincer umatlas     36292 Jul 27 11:34 runpilot2-wrapper.sh
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas       100 Jul 27 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:11:14] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 19:46 run_atlas
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas       105 Jul 27 19:46 job.xml
[2025-07-27 21:11:14] -rw-r--r-- 2 boincer umatlas 230008778 Jul 27 19:46 EVNT.45743347._002761.pool.root.1
[2025-07-27 21:11:14] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:46 start_atlas.sh
[2025-07-27 21:11:14] drwxrwx--x 2 boincer umatlas      4096 Jul 27 19:46 shared
[2025-07-27 21:11:14] -rw-r--r-- 2 boincer umatlas    542901 Jul 27 19:46 input.tar.gz
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas         0 Jul 27 19:46 boinc_lockfile
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 19:46 pandaJob.out
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas    980125 Jul 27 19:47 agis_schedconf.cvmfs.json
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas   1593052 Jul 27 19:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:11:14] drwx------ 4 boincer umatlas      4096 Jul 27 19:47 pilot3
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 21:03 init_data.xml
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas        95 Jul 27 21:10 pilot_heartbeat.json
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas 206555079 Jul 27 21:10 HITS.45743349._051615.pool.root.1
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas       529 Jul 27 21:10 boinc_task_state.xml
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas      1050 Jul 27 21:10 memory_monitor_summary.json
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas    373156 Jul 27 21:10 log.45743349._051615.job.log.tgz.1
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas      7853 Jul 27 21:10 heartbeat.json
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas        27 Jul 27 21:11 wrapper_checkpoint.txt
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 21:11 boinc_mmap_file
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas      4552 Jul 27 21:11 pilotlog.txt
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas    477113 Jul 27 21:11 log.45743349._051615.job.log.1
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas       357 Jul 27 21:11 output.list
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas       620 Jul 27 21:11 runtime_log
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas    870400 Jul 27 21:11 result.tar.gz
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas       659 Jul 27 21:11 u9EMDmUZI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOhVLDmu2JPXn.diag
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 21:11 runtime_log.err
[2025-07-27 21:11:14] -rw-r--r-- 1 boincer umatlas     21501 Jul 27 21:11 stderr.txt
[2025-07-27 21:11:14] HITS file was successfully produced:
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas 206555079 Jul 27 21:10 shared/HITS.pool.root.1
[2025-07-27 21:11:14]  *** Contents of shared directory: ***
[2025-07-27 21:11:14] total 427740
[2025-07-27 21:11:14] -rw-r--r-- 2 boincer umatlas 230008778 Jul 27 19:46 ATLAS.root_0
[2025-07-27 21:11:14] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:46 start_atlas.sh
[2025-07-27 21:11:14] -rw-r--r-- 2 boincer umatlas    542901 Jul 27 19:46 input.tar.gz
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas 206555079 Jul 27 21:10 HITS.pool.root.1
[2025-07-27 21:11:14] -rw------- 1 boincer umatlas    870400 Jul 27 21:11 result.tar.gz
21:11:16 (20291): run_atlas exited; CPU time 52692.181233
21:11:16 (20291): called boinc_finish(0)

</stderr_txt>
]]>

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