Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:46 (3816125): wrapper (7.7.26015): starting
19:39:46 (3816125): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 19:39:46] Arguments: --nthreads 10
[2025-07-27 19:39:46] Threads: 10
[2025-07-27 19:39:46] Checking for CVMFS
[2025-07-27 19:39:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:39:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:39:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:39:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:39:47] 2.13.1.0 129229 5781 141204 148828 3 65 28540198 39288832 3482 16776704 0 6132262 99.912 6348986 42044 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:39:47] CVMFS is ok
[2025-07-27 19:39:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:39:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:39:47] Further information can be found at the LHC@home message board.
[2025-07-27 19:39:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:39:47] Checking for apptainer binary...
[2025-07-27 19:39:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:39:47] Running /usr/bin/apptainer --version
[2025-07-27 19:39:47] apptainer version 1.4.1-1.el9
[2025-07-27 19:39:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:39:47] c-210-21.aglt2.org
[2025-07-27 19:39:47] apptainer works
[2025-07-27 19:39:47] Set ATHENA_PROC_NUMBER=10
[2025-07-27 19:39:47] Set ATHENA_CORE_NUMBER=10
[2025-07-27 19:39:47] Starting ATLAS job with PandaID=6747579419
[2025-07-27 19:39:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:07:42]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:07:42]  status=None
[2025-07-27 21:07:42]  status_code=0
[2025-07-27 21:07:42]  storage_token=
[2025-07-27 21:07:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747579419/log.45743349._053605.job.log.tgz.1
[2025-07-27 21:07:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/09/log.45743349._053605.job.log.tgz.1
[2025-07-27 21:07:42]  workdir=None
[2025-07-27 21:07:42] ]
[2025-07-27 21:07:42] 2025-07-28 01:07:07,474 | INFO     | sufficient remaining disk space (53990129664 B)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,475 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,521 | INFO     | transferring file log.45743349._053605.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747579419/log.45743349._053605.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 21:07:42] 2025-07-28 01:07:07,521 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747579419/log.45743349._053605.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053605.job
[2025-07-27 21:07:42] 2025-07-28 01:07:07,522 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6747579419: 3982624 B (within 2537553920 B limit)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,526 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6747579419/HITS.45743349._053605.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,526 | INFO     | total size of present files: 0 B (workdir size: 3982624 B)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,527 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6747579419/HITS.45743349._053605.pool.root.1 since it does not exist
[2025-07-27 21:07:42] 2025-07-28 01:07:07,537 | INFO     | adding to output.list: log.45743349._053605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/09/log.45743349._053605.job.log.tg
[2025-07-27 21:07:42] 2025-07-28 01:07:07,538 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:07:42] 2025-07-28 01:07:07,538 | INFO     | summary of transferred files:
[2025-07-27 21:07:42] 2025-07-28 01:07:07,538 | INFO     |  -- lfn=log.45743349._053605.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:07:42] 2025-07-28 01:07:07,538 | INFO     | stage-out finished correctly
[2025-07-27 21:07:42] 2025-07-28 01:07:07,624 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:07:42] 2025-07-28 01:07:07,699 | INFO     | job 6747579419 has state=finished
[2025-07-27 21:07:42] 2025-07-28 01:07:07,699 | INFO     | preparing for final server update for job 6747579419 in state='finished'
[2025-07-27 21:07:42] 2025-07-28 01:07:07,766 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,767 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,767 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,767 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:07:42] 2025-07-28 01:07:07,767 | INFO     | job 6747579419 has finished - writing final server update
[2025-07-27 21:07:42] 2025-07-28 01:07:07,768 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:07:42] 2025-07-28 01:07:07,768 | INFO     | executing command: lscpu
[2025-07-27 21:07:42] 2025-07-28 01:07:07,803 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:07:42] 2025-07-28 01:07:07,908 | INFO     | number of running child processes to parent process 3826260: 1
[2025-07-27 21:07:42] 2025-07-28 01:07:07,909 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:07:42] 2025-07-28 01:07:10,411 | INFO     | monitor loop #393: job 0:6747579419 is in state 'finished'
[2025-07-27 21:07:42] 2025-07-28 01:07:10,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:07:42] 2025-07-28 01:07:10,744 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 21:07:42] 2025-07-28 01:07:10,749 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2630.155925
[2025-07-27 21:07:42] 2025-07-28 01:07:10,754 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579419/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:07:42] 2025-07-28 01:07:10,755 | INFO     | extracted standard info from prmon json
[2025-07-27 21:07:42] 2025-07-28 01:07:10,755 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:07:42] 2025-07-28 01:07:10,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:07:42] 2025-07-28 01:07:10,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:07:42] 2025-07-28 01:07:10,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:07:42] 2025-07-28 01:07:10,757 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:07:42] 2025-07-28 01:07:10,757 | INFO     | sum of square deviations: 152858680.0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,757 | INFO     | sum of deviations: -16645353223.0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,757 | INFO     | mean x: 1753662305.0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,757 | INFO     | mean y: 2831430.582278481
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | -- intersect: 190965676985.6097
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | intersect: 190965676985.6097
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | chi2: 0.14148338129413643
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | -- intersect: 190965676985.6097
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | current memory leak: -108.89 B/s (using 79 data points, chi2=0.14)
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | could have reported an average CPU frequency of 2612 MHz (6 samples)
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | ..............................
[2025-07-27 21:07:42] 2025-07-28 01:07:10,758 | INFO     | . Timing measurements:
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | . get job = 0 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | . initial setup = 2 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | . payload setup = 6 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | . stage-in = 0 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | . payload execution = 5205 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | . stage-out = 0 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | . log creation = 0 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,759 | INFO     | ..............................
[2025-07-27 21:07:42] 2025-07-28 01:07:10,835 | INFO     | 
[2025-07-27 21:07:42] 2025-07-28 01:07:10,835 | INFO     | job summary report
[2025-07-27 21:07:42] 2025-07-28 01:07:10,835 | INFO     | --------------------------------------------------
[2025-07-27 21:07:42] 2025-07-28 01:07:10,835 | INFO     | PanDA job id: 6747579419
[2025-07-27 21:07:42] 2025-07-28 01:07:10,835 | INFO     | task id: 45743349
[2025-07-27 21:07:42] 2025-07-28 01:07:10,835 | INFO     | errors: (none)
[2025-07-27 21:07:42] 2025-07-28 01:07:10,835 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | pilot state: finished 
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | transexitcode: 0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | exeerrorcode: 0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | exeerrordiag: 
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | exitcode: 0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | exitmsg: OK
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | cpuconsumptiontime: 47318 s
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | nevents: 400
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | neventsw: 0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | pid: 3826260
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | pgrp: 3826260
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | corecount: 10
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | event service: False
[2025-07-27 21:07:42] 2025-07-28 01:07:10,836 | INFO     | sizes: {0: 2396645, 1: 2397501, 5: 2397763, 12: 2397819, 5215: 2424257, 5216: 2433563, 5220: 2433701}
[2025-07-27 21:07:42] 2025-07-28 01:07:10,837 | INFO     | --------------------------------------------------
[2025-07-27 21:07:42] 2025-07-28 01:07:10,837 | INFO     | 
[2025-07-27 21:07:42] 2025-07-28 01:07:10,837 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,851 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:07:42] 2025-07-28 01:07:10,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,852 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:07:42] 2025-07-28 01:07:10,852 | INFO     | job 6747579419 has completed (purged errors)
[2025-07-27 21:07:42] 2025-07-28 01:07:10,852 | INFO     | overall cleanup function is called
[2025-07-27 21:07:42] 2025-07-28 01:07:11,859 | INFO     | --- collectZombieJob: --- 10, [3826260]
[2025-07-27 21:07:42] 2025-07-28 01:07:11,860 | INFO     | zombie collector waiting for pid 3826260
[2025-07-27 21:07:42] 2025-07-28 01:07:11,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:07:42] 2025-07-28 01:07:11,860 | INFO     | collected zombie processes
[2025-07-27 21:07:42] 2025-07-28 01:07:11,860 | INFO     | will attempt to kill all subprocesses of pid=3826260
[2025-07-27 21:07:42] 2025-07-28 01:07:12,032 | INFO     | process IDs to be killed: [3826260] (in reverse order)
[2025-07-27 21:07:42] 2025-07-28 01:07:12,087 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:07:42] 2025-07-28 01:07:12,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:07:42] 2025-07-28 01:07:12,093 | INFO     | did not find any defunct processes belonging to 3826260
[2025-07-27 21:07:42] 2025-07-28 01:07:12,097 | INFO     | did not find any defunct processes belonging to 3826260
[2025-07-27 21:07:42] 2025-07-28 01:07:12,098 | INFO     | ready for new job
[2025-07-27 21:07:42] 2025-07-28 01:07:12,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:07:42] 2025-07-28 01:07:12,099 | INFO     | ***************************************
[2025-07-27 21:07:42] 2025-07-28 01:07:12,099 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:07:42] 2025-07-28 01:07:12,099 | INFO     | ***************************************
[2025-07-27 21:07:42] 2025-07-28 01:07:12,099 | INFO     | 
[2025-07-27 21:07:42] 2025-07-28 01:07:12,101 | INFO     | architecture information:
[2025-07-27 21:07:42] 2025-07-28 01:07:12,101 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:07:42] 2025-07-28 01:07:12,112 | INFO     | cat /etc/os-release:
[2025-07-27 21:07:42] NAME="CentOS Linux"
[2025-07-27 21:07:42] VERSION="7 (Core)"
[2025-07-27 21:07:42] ID="centos"
[2025-07-27 21:07:42] ID_LIKE="rhel fedora"
[2025-07-27 21:07:42] VERSION_ID="7"
[2025-07-27 21:07:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:07:42] ANSI_COLOR="0;31"
[2025-07-27 21:07:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:07:42] HOME_URL="https://www.centos.org/"
[2025-07-27 21:07:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:07:42] 
[2025-07-27 21:07:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:07:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:07:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:07:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:07:42] 
[2025-07-27 21:07:42] 2025-07-28 01:07:12,113 | INFO     | ***************************************
[2025-07-27 21:07:42] 2025-07-28 01:07:12,616 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 21:07:42] 2025-07-28 01:07:12,631 | INFO     | sufficient remaining disk space (53995372544 B)
[2025-07-27 21:07:42] 2025-07-28 01:07:12,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:07:42] 2025-07-28 01:07:12,632 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:07:42] 2025-07-28 01:07:12,632 | INFO     | update_server=False
[2025-07-27 21:07:42] 2025-07-28 01:07:12,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:07:42] 2025-07-28 01:07:12,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:07:42] 2025-07-28 01:07:12,683 | INFO     | all data control threads have been joined
[2025-07-27 21:07:42] 2025-07-28 01:07:12,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 21:07:42] 2025-07-28 01:07:12,915 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 21:07:42] 2025-07-28 01:07:12,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:07:42] 2025-07-28 01:07:12,915 | INFO     | will abort loop
[2025-07-27 21:07:42] 2025-07-28 01:07:13,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:07:42] 2025-07-28 01:07:13,637 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:13,638 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:13,688 | INFO     | [data] control thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:13,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:07:42] 2025-07-28 01:07:13,725 | INFO     | all payload control threads have been joined
[2025-07-27 21:07:42] 2025-07-28 01:07:13,919 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,005 | INFO     | all job control threads have been joined
[2025-07-27 21:07:42] 2025-07-28 01:07:14,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,018 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,115 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,166 | INFO     | [job] validate thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,368 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,607 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,730 | INFO     | [payload] control thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:14,818 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:15,010 | INFO     | [job] control thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:15,134 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:15,161 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:17,709 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:07:42] 2025-07-28 01:07:18,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140146019583808)>', '<ExcThread(monitor, started 140145386845952)>']
[2025-07-27 21:07:42] 2025-07-28 01:07:23,980 | INFO     | all workflow threads have been joined
[2025-07-27 21:07:42] 2025-07-28 01:07:23,981 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:07:42] 2025-07-28 01:07:23,981 | INFO     | traces error code: 0
[2025-07-27 21:07:42] 2025-07-28 01:07:23,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:07:42] 2025-07-28 01:07:42,640 | INFO     | PID=3819717 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:07:42] 2025-07-28 01:07:42,640 | INFO     | .. there are 5 such processes running
[2025-07-27 21:07:42] 2025-07-28 01:07:42,641 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:07:42] 2025-07-28 01:07:42,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:07:42] 2025-07-28 01:07:42,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:07:42] 2025-07-28 01:07:42,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:07:42] 2025-07-28 01:07:42,641 | INFO     | [monitor] control thread has ended
[2025-07-27 21:07:42] 2025-07-28 01:07:42,744 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:07:42] 2025-07-28 01:07:42,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:07:42] 2025-07-28 01:07:42,750 [wrapper] pilotpid: 3819717
[2025-07-27 21:07:42] 2025-07-28 01:07:42,753 [wrapper] Pilot exit status: 0
[2025-07-27 21:07:42] 2025-07-28 01:07:42,762 [wrapper] pandaids: 6747579419
[2025-07-27 21:07:42] 2025-07-28 01:07:42,802 [wrapper] cleanup supervisor_pilot 3897131 3819718
[2025-07-27 21:07:42] 2025-07-28 01:07:42,804 [wrapper] Test setup, not cleaning
[2025-07-27 21:07:42] 2025-07-28 01:07:42,806 [wrapper] apfmon messages muted
[2025-07-27 21:07:42] 2025-07-28 01:07:42,809 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:07:42] 2025-07-28 01:07:42,810 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:07:42]  *** Error codes and diagnostics ***
[2025-07-27 21:07:42]     "exeErrorCode": 0,
[2025-07-27 21:07:42]     "exeErrorDiag": "",
[2025-07-27 21:07:42]     "pilotErrorCode": 0,
[2025-07-27 21:07:42]     "pilotErrorDiag": "",
[2025-07-27 21:07:42]  *** Listing of results directory ***
[2025-07-27 21:07:42] total 351880
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-27 21:07:42] -rwx------. 1 boincer umatlas     36292 Jul 27 14:12 runpilot2-wrapper.sh
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:12 queuedata.json
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas       100 Jul 27 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:07:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 19:39 run_atlas
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas       105 Jul 27 19:39 job.xml
[2025-07-27 21:07:42] -rw-r--r--. 2 boincer umatlas 148033171 Jul 27 19:39 EVNT.45743347._002936.pool.root.1
[2025-07-27 21:07:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:39 start_atlas.sh
[2025-07-27 21:07:42] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 19:39 shared
[2025-07-27 21:07:42] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 19:39 input.tar.gz
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas         0 Jul 27 19:39 boinc_lockfile
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 19:39 pandaJob.out
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas    980125 Jul 27 19:39 agis_schedconf.cvmfs.json
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas   1593052 Jul 27 19:39 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:07:42] drwx------. 4 boincer umatlas      4096 Jul 27 19:39 pilot3
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 21:04 init_data.xml
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas       529 Jul 27 21:06 boinc_task_state.xml
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas 206719166 Jul 27 21:06 HITS.45743349._053605.pool.root.1
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas      1030 Jul 27 21:07 memory_monitor_summary.json
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas    329866 Jul 27 21:07 log.45743349._053605.job.log.tgz.1
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas      7815 Jul 27 21:07 heartbeat.json
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas        27 Jul 27 21:07 wrapper_checkpoint.txt
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 21:07 boinc_mmap_file
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas        95 Jul 27 21:07 pilot_heartbeat.json
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas       822 Jul 27 21:07 pilotlog.txt
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas    517739 Jul 27 21:07 log.45743349._053605.job.log.1
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas       357 Jul 27 21:07 output.list
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas       620 Jul 27 21:07 runtime_log
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas    870400 Jul 27 21:07 result.tar.gz
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 21:07 runtime_log.err
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas       651 Jul 27 21:07 JpvNDmo2K07n9Rq4apOajLDm4fhM0noT9bVof3QYDmov2KDmhBthZn.diag
[2025-07-27 21:07:42] -rw-r--r--. 1 boincer umatlas     22193 Jul 27 21:07 stderr.txt
[2025-07-27 21:07:42] HITS file was successfully produced:
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas 206719166 Jul 27 21:06 shared/HITS.pool.root.1
[2025-07-27 21:07:42]  *** Contents of shared directory: ***
[2025-07-27 21:07:42] total 347844
[2025-07-27 21:07:42] -rw-r--r--. 2 boincer umatlas 148033171 Jul 27 19:39 ATLAS.root_0
[2025-07-27 21:07:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:39 start_atlas.sh
[2025-07-27 21:07:42] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 19:39 input.tar.gz
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas 206719166 Jul 27 21:06 HITS.pool.root.1
[2025-07-27 21:07:42] -rw-------. 1 boincer umatlas    870400 Jul 27 21:07 result.tar.gz
21:07:44 (3816125): run_atlas exited; CPU time 47411.886916
21:07:44 (3816125): called boinc_finish(0)

</stderr_txt>
]]>

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