Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:00:51 (1395041): wrapper (7.7.26015): starting
21:00:51 (1395041): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 21:00:51] Arguments: --nthreads 12
[2025-07-27 21:00:51] Threads: 12
[2025-07-27 21:00:51] Checking for CVMFS
[2025-07-27 21:00:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:00:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:00:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:00:51] 2.13.0.0 3229734 19116 332316 148829 0 215 32552688 40960001 10382 16776704 0 60472824 99.838 48028758 27708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 21:00:51] CVMFS is ok
[2025-07-27 21:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 21:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 21:00:51] Further information can be found at the LHC@home message board.
[2025-07-27 21:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:00:51] Checking for apptainer binary...
[2025-07-27 21:00:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 21:00:51] Running /usr/bin/apptainer --version
[2025-07-27 21:00:51] apptainer version 1.4.1-1.el9
[2025-07-27 21:00:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:00:52] c6-5-7-4.aglt2.org
[2025-07-27 21:00:52] apptainer works
[2025-07-27 21:00:52] Set ATHENA_PROC_NUMBER=12
[2025-07-27 21:00:52] Set ATHENA_CORE_NUMBER=12
[2025-07-27 21:00:52] Starting ATLAS job with PandaID=6747577605
[2025-07-27 21:00:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:15:00]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:15:00]  is_altstaged=None
[2025-07-27 22:15:00]  is_tar=False
[2025-07-27 22:15:00]  lfn=log.45743349._053120.job.log.tgz.1
[2025-07-27 22:15:00]  mtime=0
[2025-07-27 22:15:00]  protocol_id=None
[2025-07-27 22:15:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 22:15:00]  replicas=None
[2025-07-27 22:15:00]  scope=mc23_13p6TeV
[2025-07-27 22:15:00]  status=None
[2025-07-27 22:15:00]  status_code=0
[2025-07-27 22:15:00]  storage_token=
[2025-07-27 22:15:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747577605/log.45743349._053120.job.log.tgz.1
[2025-07-27 22:15:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/14/log.45743349._053120.job.log.tgz.1
[2025-07-27 22:15:00]  workdir=None
[2025-07-27 22:15:00] ]
[2025-07-27 22:15:00] 2025-07-28 02:14:20,564 | INFO     | transferring file log.45743349._053120.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747577605/log.45743349._053120.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 22:15:00] 2025-07-28 02:14:20,564 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747577605/log.45743349._053120.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053120.job
[2025-07-27 22:15:00] 2025-07-28 02:14:20,587 | INFO     | adding to output.list: log.45743349._053120.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/14/log.45743349._053120.job.log.tg
[2025-07-27 22:15:00] 2025-07-28 02:14:20,588 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:15:00] 2025-07-28 02:14:20,589 | INFO     | summary of transferred files:
[2025-07-27 22:15:00] 2025-07-28 02:14:20,589 | INFO     |  -- lfn=log.45743349._053120.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:15:00] 2025-07-28 02:14:20,589 | INFO     | stage-out finished correctly
[2025-07-27 22:15:00] 2025-07-28 02:14:20,758 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:15:00] 2025-07-28 02:14:20,840 | INFO     | job 6747577605 has state=finished
[2025-07-27 22:15:00] 2025-07-28 02:14:20,840 | INFO     | preparing for final server update for job 6747577605 in state='finished'
[2025-07-27 22:15:00] 2025-07-28 02:14:20,840 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:15:00] 2025-07-28 02:14:20,841 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:15:00] 2025-07-28 02:14:20,841 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:15:00] 2025-07-28 02:14:20,841 | INFO     | job 6747577605 has finished - writing final server update
[2025-07-27 22:15:00] 2025-07-28 02:14:20,841 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:15:00] 2025-07-28 02:14:20,843 | INFO     | executing command: lscpu
[2025-07-27 22:15:00] 2025-07-28 02:14:20,899 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:15:00] 2025-07-28 02:14:21,825 | INFO     | monitor loop #326: job 0:6747577605 is in state 'finished'
[2025-07-27 22:15:00] 2025-07-28 02:14:21,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:15:00] 2025-07-28 02:14:24,329 | INFO     | monitor loop #327: job 0:6747577605 is in state 'finished'
[2025-07-27 22:15:00] 2025-07-28 02:14:24,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:15:00] 2025-07-28 02:14:26,262 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 22:15:00] 2025-07-28 02:14:26,270 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2784.9167321428577
[2025-07-27 22:15:00] 2025-07-28 02:14:26,279 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747577605/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:15:00] 2025-07-28 02:14:26,279 | INFO     | extracted standard info from prmon json
[2025-07-27 22:15:00] 2025-07-28 02:14:26,280 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:15:00] 2025-07-28 02:14:26,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:15:00] 2025-07-28 02:14:26,280 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:15:00] 2025-07-28 02:14:26,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:15:00] 2025-07-28 02:14:26,283 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:15:00] 2025-07-28 02:14:26,283 | INFO     | sum of square deviations: 85136480.0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,283 | INFO     | sum of deviations: -6167661810.0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,283 | INFO     | mean x: 1753666752.0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,284 | INFO     | mean y: 2807202.3538461537
[2025-07-27 22:15:00] 2025-07-28 02:14:26,284 | INFO     | -- intersect: 127046155174.65833
[2025-07-27 22:15:00] 2025-07-28 02:14:26,284 | INFO     | intersect: 127046155174.65833
[2025-07-27 22:15:00] 2025-07-28 02:14:26,284 | INFO     | chi2: 0.0937500460154551
[2025-07-27 22:15:00] 2025-07-28 02:14:26,284 | INFO     | -- intersect: 127046155174.65833
[2025-07-27 22:15:00] 2025-07-28 02:14:26,284 | INFO     | current memory leak: -72.44 B/s (using 65 data points, chi2=0.09)
[2025-07-27 22:15:00] 2025-07-28 02:14:26,284 | INFO     | could have reported an average CPU frequency of 2773 MHz (6 samples)
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | ..............................
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . Timing measurements:
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . get job = 0 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . initial setup = 2 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . payload setup = 8 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . stage-in = 0 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . payload execution = 4366 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . stage-out = 0 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | . log creation = 0 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,285 | INFO     | ..............................
[2025-07-27 22:15:00] 2025-07-28 02:14:26,658 | INFO     | 
[2025-07-27 22:15:00] 2025-07-28 02:14:26,658 | INFO     | job summary report
[2025-07-27 22:15:00] 2025-07-28 02:14:26,658 | INFO     | --------------------------------------------------
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | PanDA job id: 6747577605
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | task id: 45743349
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | errors: (none)
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | pilot state: finished 
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | transexitcode: 0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | exeerrorcode: 0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | exeerrordiag: 
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | exitcode: 0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | exitmsg: OK
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | cpuconsumptiontime: 47868 s
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | nevents: 400
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | neventsw: 0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | pid: 1406720
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | pgrp: 1406720
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | corecount: 12
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | event service: False
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 4378: 2423756, 4379: 2423755, 4380: 2432993, 4385: 2433131}
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | --------------------------------------------------
[2025-07-27 22:15:00] 2025-07-28 02:14:26,659 | INFO     | 
[2025-07-27 22:15:00] 2025-07-28 02:14:26,660 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:15:00] 2025-07-28 02:14:26,684 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:15:00] 2025-07-28 02:14:26,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:15:00] 2025-07-28 02:14:26,686 | INFO     | job 6747577605 has completed (purged errors)
[2025-07-27 22:15:00] 2025-07-28 02:14:26,686 | INFO     | overall cleanup function is called
[2025-07-27 22:15:00] 2025-07-28 02:14:27,694 | INFO     | --- collectZombieJob: --- 10, [1406720]
[2025-07-27 22:15:00] 2025-07-28 02:14:27,694 | INFO     | zombie collector waiting for pid 1406720
[2025-07-27 22:15:00] 2025-07-28 02:14:27,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:15:00] 2025-07-28 02:14:27,694 | INFO     | collected zombie processes
[2025-07-27 22:15:00] 2025-07-28 02:14:27,695 | INFO     | will attempt to kill all subprocesses of pid=1406720
[2025-07-27 22:15:00] 2025-07-28 02:14:27,954 | INFO     | process IDs to be killed: [1406720] (in reverse order)
[2025-07-27 22:15:00] 2025-07-28 02:14:28,048 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:15:00] 2025-07-28 02:14:28,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:15:00] 2025-07-28 02:14:28,059 | INFO     | did not find any defunct processes belonging to 1406720
[2025-07-27 22:15:00] 2025-07-28 02:14:28,070 | INFO     | did not find any defunct processes belonging to 1406720
[2025-07-27 22:15:00] 2025-07-28 02:14:28,070 | INFO     | ready for new job
[2025-07-27 22:15:00] 2025-07-28 02:14:28,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:15:00] 2025-07-28 02:14:28,072 | INFO     | ***************************************
[2025-07-27 22:15:00] 2025-07-28 02:14:28,072 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:15:00] 2025-07-28 02:14:28,072 | INFO     | ***************************************
[2025-07-27 22:15:00] 2025-07-28 02:14:28,072 | INFO     | 
[2025-07-27 22:15:00] 2025-07-28 02:14:28,075 | INFO     | architecture information:
[2025-07-27 22:15:00] 2025-07-28 02:14:28,076 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:15:00] 2025-07-28 02:14:28,094 | INFO     | cat /etc/os-release:
[2025-07-27 22:15:00] NAME="CentOS Linux"
[2025-07-27 22:15:00] VERSION="7 (Core)"
[2025-07-27 22:15:00] ID="centos"
[2025-07-27 22:15:00] ID_LIKE="rhel fedora"
[2025-07-27 22:15:00] VERSION_ID="7"
[2025-07-27 22:15:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:15:00] ANSI_COLOR="0;31"
[2025-07-27 22:15:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:15:00] HOME_URL="https://www.centos.org/"
[2025-07-27 22:15:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:15:00] 
[2025-07-27 22:15:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:15:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:15:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:15:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:15:00] 
[2025-07-27 22:15:00] 2025-07-28 02:14:28,094 | INFO     | ***************************************
[2025-07-27 22:15:00] 2025-07-28 02:14:28,596 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:15:00] 2025-07-28 02:14:28,618 | INFO     | sufficient remaining disk space (75519492096 B)
[2025-07-27 22:15:00] 2025-07-28 02:14:28,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:15:00] 2025-07-28 02:14:28,619 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:15:00] 2025-07-28 02:14:28,619 | INFO     | update_server=False
[2025-07-27 22:15:00] 2025-07-28 02:14:28,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:15:00] 2025-07-28 02:14:28,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:15:00] 2025-07-28 02:14:28,620 | INFO     | aborting loop
[2025-07-27 22:15:00] 2025-07-28 02:14:28,669 | INFO     | all data control threads have been joined
[2025-07-27 22:15:00] 2025-07-28 02:14:28,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:15:00] 2025-07-28 02:14:29,228 | INFO     | all job control threads have been joined
[2025-07-27 22:15:00] 2025-07-28 02:14:29,625 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:29,626 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:29,675 | INFO     | [data] control thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:29,820 | INFO     | all payload control threads have been joined
[2025-07-27 22:15:00] 2025-07-28 02:14:29,846 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,233 | INFO     | [job] control thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,258 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,371 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,665 | INFO     | [job] validate thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,728 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,825 | INFO     | [payload] control thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,937 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:30,998 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:31,086 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:31,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:15:00] 2025-07-28 02:14:31,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:15:00] 2025-07-28 02:14:32,397 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:35,361 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:39,657 | INFO     | job.realtimelogging is not enabled
[2025-07-27 22:15:00] 2025-07-28 02:14:40,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:15:00] 2025-07-28 02:14:41,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457149814592)>', '<ExcThread(monitor, started 140456436430592)>']
[2025-07-27 22:15:00] 2025-07-28 02:14:46,258 | INFO     | all workflow threads have been joined
[2025-07-27 22:15:00] 2025-07-28 02:14:46,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:15:00] 2025-07-28 02:14:46,258 | INFO     | traces error code: 0
[2025-07-27 22:15:00] 2025-07-28 02:14:46,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:15:00] 2025-07-28 02:14:59,676 | INFO     | PID=1398786 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:15:00] 2025-07-28 02:14:59,677 | INFO     | .. there are 13 such processes running
[2025-07-27 22:15:00] 2025-07-28 02:14:59,678 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:15:00] 2025-07-28 02:14:59,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:15:00] 2025-07-28 02:14:59,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:15:00] 2025-07-28 02:14:59,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:15:00] 2025-07-28 02:14:59,678 | INFO     | [monitor] control thread has ended
[2025-07-27 22:15:00] 2025-07-28 02:14:59,845 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:15:00] 2025-07-28 02:14:59,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:15:00] 2025-07-28 02:14:59,853 [wrapper] pilotpid: 1398786
[2025-07-27 22:15:00] 2025-07-28 02:14:59,856 [wrapper] Pilot exit status: 0
[2025-07-27 22:15:00] 2025-07-28 02:14:59,869 [wrapper] pandaids: 6747577605
[2025-07-27 22:15:00] 2025-07-28 02:14:59,932 [wrapper] cleanup supervisor_pilot 1539675 1398787
[2025-07-27 22:15:00] 2025-07-28 02:14:59,936 [wrapper] Test setup, not cleaning
[2025-07-27 22:15:00] 2025-07-28 02:14:59,941 [wrapper] apfmon messages muted
[2025-07-27 22:15:00] 2025-07-28 02:14:59,947 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:15:00] 2025-07-28 02:14:59,951 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:15:00]  *** Error codes and diagnostics ***
[2025-07-27 22:15:00]     "exeErrorCode": 0,
[2025-07-27 22:15:00]     "exeErrorDiag": "",
[2025-07-27 22:15:00]     "pilotErrorCode": 0,
[2025-07-27 22:15:00]     "pilotErrorDiag": "",
[2025-07-27 22:15:00]  *** Listing of results directory ***
[2025-07-27 22:15:00] total 356156
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 13:39 pilot3.tar.gz
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:42 queuedata.json
[2025-07-27 22:15:00] -rwx------. 1 boincer umatlas     36292 Jul 27 13:43 runpilot2-wrapper.sh
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas       100 Jul 27 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:15:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 21:00 run_atlas
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas       105 Jul 27 21:00 job.xml
[2025-07-27 22:15:00] -rw-r--r--. 2 boincer umatlas 143574373 Jul 27 21:00 EVNT.45743347._002904.pool.root.1
[2025-07-27 22:15:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 21:00 shared
[2025-07-27 22:15:00] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 21:00 input.tar.gz
[2025-07-27 22:15:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:00 start_atlas.sh
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas         0 Jul 27 21:00 boinc_lockfile
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 21:00 pandaJob.out
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas    980125 Jul 27 21:01 agis_schedconf.cvmfs.json
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas   1593052 Jul 27 21:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:15:00] drwx------. 4 boincer umatlas      4096 Jul 27 21:01 pilot3
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas      6840 Jul 27 22:13 init_data.xml
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas 215658512 Jul 27 22:13 HITS.45743349._053120.pool.root.1
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas       529 Jul 27 22:13 boinc_task_state.xml
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas      1039 Jul 27 22:14 memory_monitor_summary.json
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas    354676 Jul 27 22:14 log.45743349._053120.job.log.tgz.1
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas      7826 Jul 27 22:14 heartbeat.json
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:14 boinc_mmap_file
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:14 wrapper_checkpoint.txt
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas        95 Jul 27 22:14 pilot_heartbeat.json
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas       823 Jul 27 22:14 pilotlog.txt
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas    440408 Jul 27 22:14 log.45743349._053120.job.log.1
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas       357 Jul 27 22:14 output.list
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:14 runtime_log
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas    819200 Jul 27 22:14 result.tar.gz
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas       654 Jul 27 22:15 uUiMDmkaK07n9Rq4apOajLDm4fhM0noT9bVof3QYDmer2KDmWTvByn.diag
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 22:15 runtime_log.err
[2025-07-27 22:15:00] -rw-r--r--. 1 boincer umatlas     21482 Jul 27 22:15 stderr.txt
[2025-07-27 22:15:00] HITS file was successfully produced:
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas 215658512 Jul 27 22:13 shared/HITS.pool.root.1
[2025-07-27 22:15:00]  *** Contents of shared directory: ***
[2025-07-27 22:15:00] total 352172
[2025-07-27 22:15:00] -rw-r--r--. 2 boincer umatlas 143574373 Jul 27 21:00 ATLAS.root_0
[2025-07-27 22:15:00] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 21:00 input.tar.gz
[2025-07-27 22:15:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 21:00 start_atlas.sh
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas 215658512 Jul 27 22:13 HITS.pool.root.1
[2025-07-27 22:15:00] -rw-------. 1 boincer umatlas    819200 Jul 27 22:14 result.tar.gz
22:15:01 (1395041): run_atlas exited; CPU time 47958.775129
22:15:01 (1395041): called boinc_finish(0)

</stderr_txt>
]]>

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