Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:35 (26204): wrapper (7.7.26015): starting
19:39:35 (26204): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 19:39:35] Arguments: --nthreads 8
[2025-07-27 19:39:35] Threads: 8
[2025-07-27 19:39:35] Checking for CVMFS
[2025-07-27 19:39:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:39:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:39:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:39:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:39:36] 2.11.2.0 2923 95636 77960 148828 0 57 15872212 20275200 1 130560 0 26214004 99.957 7243204 8148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:39:36] CVMFS is ok
[2025-07-27 19:39:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:39:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:39:36] Further information can be found at the LHC@home message board.
[2025-07-27 19:39:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:39:36] Checking for apptainer binary...
[2025-07-27 19:39:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:39:36] Running /usr/bin/apptainer --version
[2025-07-27 19:39:36] apptainer version 1.3.2-1.el7
[2025-07-27 19:39:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:39:37] c-204-28.aglt2.org
[2025-07-27 19:39:37] apptainer works
[2025-07-27 19:39:37] Set ATHENA_PROC_NUMBER=8
[2025-07-27 19:39:37] Set ATHENA_CORE_NUMBER=8
[2025-07-27 19:39:37] Starting ATLAS job with PandaID=6747599423
[2025-07-27 19:39:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:04:31]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:04:31] 2025-07-28 02:03:56,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,815 | INFO     | monitor loop #641: job 0:6747599423 is in state 'finished'
[2025-07-27 22:04:31] 2025-07-28 02:03:58,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,936 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 22:04:31] 2025-07-28 02:03:58,939 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-07-27 22:04:31] 2025-07-28 02:03:58,942 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747599423/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,942 | INFO     | extracted standard info from prmon json
[2025-07-27 22:04:31] 2025-07-28 02:03:58,943 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:04:31] 2025-07-28 02:03:58,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:04:31] 2025-07-28 02:03:58,943 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:04:31] 2025-07-28 02:03:58,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:04:31] 2025-07-28 02:03:58,947 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:04:31] 2025-07-28 02:03:58,947 | INFO     | sum of square deviations: 869188390.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,948 | INFO     | sum of deviations: -5827726072.9999895
[2025-07-27 22:04:31] 2025-07-28 02:03:58,948 | INFO     | mean x: 1753663897.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,948 | INFO     | mean y: 2543439.3829787234
[2025-07-27 22:04:31] 2025-07-28 02:03:58,948 | INFO     | -- intersect: 11760492502.445898
[2025-07-27 22:04:31] 2025-07-28 02:03:58,949 | INFO     | intersect: 11760492502.445898
[2025-07-27 22:04:31] 2025-07-28 02:03:58,949 | INFO     | chi2: 1.5721268957142551
[2025-07-27 22:04:31] 2025-07-28 02:03:58,949 | INFO     | sum of square deviations: 779958810.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,950 | INFO     | sum of deviations: -5340646990.000001
[2025-07-27 22:04:31] 2025-07-28 02:03:58,950 | INFO     | mean x: 1753663744.5
[2025-07-27 22:04:31] 2025-07-28 02:03:58,951 | INFO     | mean y: 2544272.279411765
[2025-07-27 22:04:31] 2025-07-28 02:03:58,951 | INFO     | -- intersect: 12010484792.2872
[2025-07-27 22:04:31] 2025-07-28 02:03:58,951 | INFO     | intersect: 12010484792.2872
[2025-07-27 22:04:31] 2025-07-28 02:03:58,951 | INFO     | chi2: 1.5716599249577445
[2025-07-27 22:04:31] 2025-07-28 02:03:58,951 | INFO     | current chi2=1.5716599249577445 (change=0.029703121152852695 %)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,951 | INFO     | right removable region: 135
[2025-07-27 22:04:31] 2025-07-28 02:03:58,952 | INFO     | sum of square deviations: 779958810.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,952 | INFO     | sum of deviations: -26478894152.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,952 | INFO     | mean x: 1753664049.5
[2025-07-27 22:04:31] 2025-07-28 02:03:58,953 | INFO     | mean y: 2578150.779411765
[2025-07-27 22:04:31] 2025-07-28 02:03:58,953 | INFO     | -- intersect: 59537882002.117645
[2025-07-27 22:04:31] 2025-07-28 02:03:58,953 | INFO     | intersect: 59537882002.117645
[2025-07-27 22:04:31] 2025-07-28 02:03:58,953 | INFO     | chi2: 0.1477542621308166
[2025-07-27 22:04:31] 2025-07-28 02:03:58,953 | INFO     | current chi2=0.1477542621308166 (change=90.60163256963503 %)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,954 | INFO     | sum of square deviations: 697054930.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,954 | INFO     | sum of deviations: -24794690801.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,954 | INFO     | mean x: 1753664202.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,954 | INFO     | mean y: 2574973.7404580154
[2025-07-27 22:04:31] 2025-07-28 02:03:58,955 | INFO     | -- intersect: 62381535061.394394
[2025-07-27 22:04:31] 2025-07-28 02:03:58,955 | INFO     | intersect: 62381535061.394394
[2025-07-27 22:04:31] 2025-07-28 02:03:58,955 | INFO     | chi2: 0.1350663681085785
[2025-07-27 22:04:31] 2025-07-28 02:03:58,955 | INFO     | current chi2=0.1350663681085785 (change=8.587159408643437 %)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,955 | INFO     | left removable region: 20
[2025-07-27 22:04:31] 2025-07-28 02:03:58,955 | INFO     | sum of square deviations: 471562330.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,956 | INFO     | sum of deviations: -16046458151.000002
[2025-07-27 22:04:31] 2025-07-28 02:03:58,956 | INFO     | mean x: 1753664324.0
[2025-07-27 22:04:31] 2025-07-28 02:03:58,956 | INFO     | mean y: 2560599.0608695652
[2025-07-27 22:04:31] 2025-07-28 02:03:58,956 | INFO     | -- intersect: 59676752950.19228
[2025-07-27 22:04:31] 2025-07-28 02:03:58,956 | INFO     | intersect: 59676752950.19228
[2025-07-27 22:04:31] 2025-07-28 02:03:58,957 | INFO     | chi2: 0.12110320396276635
[2025-07-27 22:04:31] 2025-07-28 02:03:58,957 | INFO     | -- intersect: 59676752950.19228
[2025-07-27 22:04:31] 2025-07-28 02:03:58,957 | INFO     | current memory leak: -34.03 B/s (using 115 data points, chi2=0.12)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,957 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-07-27 22:04:31] 2025-07-28 02:03:58,957 | INFO     | ..............................
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . Timing measurements:
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . get job = 0 s
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . initial setup = 2 s
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . payload setup = 11 s
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . stage-in = 0 s
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . payload execution = 8606 s
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . stage-out = 0 s
[2025-07-27 22:04:31] 2025-07-28 02:03:58,958 | INFO     | . log creation = 0 s
[2025-07-27 22:04:31] 2025-07-28 02:03:58,959 | INFO     | ..............................
[2025-07-27 22:04:31] 2025-07-28 02:03:59,052 | INFO     | 
[2025-07-27 22:04:31] 2025-07-28 02:03:59,052 | INFO     | job summary report
[2025-07-27 22:04:31] 2025-07-28 02:03:59,052 | INFO     | --------------------------------------------------
[2025-07-27 22:04:31] 2025-07-28 02:03:59,052 | INFO     | PanDA job id: 6747599423
[2025-07-27 22:04:31] 2025-07-28 02:03:59,052 | INFO     | task id: 45743349
[2025-07-27 22:04:31] 2025-07-28 02:03:59,052 | INFO     | errors: (none)
[2025-07-27 22:04:31] 2025-07-28 02:03:59,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:04:31] 2025-07-28 02:03:59,053 | INFO     | pilot state: finished 
[2025-07-27 22:04:31] 2025-07-28 02:03:59,053 | INFO     | transexitcode: 0
[2025-07-27 22:04:31] 2025-07-28 02:03:59,053 | INFO     | exeerrorcode: 0
[2025-07-27 22:04:31] 2025-07-28 02:03:59,053 | INFO     | exeerrordiag: 
[2025-07-27 22:04:31] 2025-07-28 02:03:59,054 | INFO     | exitcode: 0
[2025-07-27 22:04:31] 2025-07-28 02:03:59,054 | INFO     | exitmsg: OK
[2025-07-27 22:04:31] 2025-07-28 02:03:59,054 | INFO     | cpuconsumptiontime: 64813 s
[2025-07-27 22:04:31] 2025-07-28 02:03:59,054 | INFO     | nevents: 400
[2025-07-27 22:04:31] 2025-07-28 02:03:59,054 | INFO     | neventsw: 0
[2025-07-27 22:04:31] 2025-07-28 02:03:59,054 | INFO     | pid: 4162
[2025-07-27 22:04:31] 2025-07-28 02:03:59,055 | INFO     | pgrp: 4162
[2025-07-27 22:04:31] 2025-07-28 02:03:59,055 | INFO     | corecount: 8
[2025-07-27 22:04:31] 2025-07-28 02:03:59,055 | INFO     | event service: False
[2025-07-27 22:04:31] 2025-07-28 02:03:59,055 | INFO     | sizes: {0: 2397361, 1: 2397503, 6: 2397765, 11: 2397793, 8621: 2425703, 8622: 2434701, 8623: 2434885, 8629: 2435079}
[2025-07-27 22:04:31] 2025-07-28 02:03:59,055 | INFO     | --------------------------------------------------
[2025-07-27 22:04:31] 2025-07-28 02:03:59,055 | INFO     | 
[2025-07-27 22:04:31] 2025-07-28 02:03:59,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:04:31] 2025-07-28 02:03:59,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:04:31] 2025-07-28 02:03:59,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:04:31] 2025-07-28 02:03:59,088 | INFO     | job 6747599423 has completed (purged errors)
[2025-07-27 22:04:31] 2025-07-28 02:03:59,088 | INFO     | overall cleanup function is called
[2025-07-27 22:04:31] 2025-07-28 02:04:00,096 | INFO     | --- collectZombieJob: --- 10, [4162]
[2025-07-27 22:04:31] 2025-07-28 02:04:00,097 | INFO     | zombie collector waiting for pid 4162
[2025-07-27 22:04:31] 2025-07-28 02:04:00,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:04:31] 2025-07-28 02:04:00,097 | INFO     | collected zombie processes
[2025-07-27 22:04:31] 2025-07-28 02:04:00,097 | INFO     | will attempt to kill all subprocesses of pid=4162
[2025-07-27 22:04:31] 2025-07-28 02:04:00,187 | INFO     | process IDs to be killed: [4162] (in reverse order)
[2025-07-27 22:04:31] 2025-07-28 02:04:00,244 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:04:31] 2025-07-28 02:04:00,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:04:31] 2025-07-28 02:04:00,249 | INFO     | did not find any defunct processes belonging to 4162
[2025-07-27 22:04:31] 2025-07-28 02:04:00,253 | INFO     | did not find any defunct processes belonging to 4162
[2025-07-27 22:04:31] 2025-07-28 02:04:00,253 | INFO     | ready for new job
[2025-07-27 22:04:31] 2025-07-28 02:04:00,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:04:31] 2025-07-28 02:04:00,255 | INFO     | ***************************************
[2025-07-27 22:04:31] 2025-07-28 02:04:00,255 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:04:31] 2025-07-28 02:04:00,255 | INFO     | ***************************************
[2025-07-27 22:04:31] 2025-07-28 02:04:00,255 | INFO     | 
[2025-07-27 22:04:31] 2025-07-28 02:04:00,256 | INFO     | architecture information:
[2025-07-27 22:04:31] 2025-07-28 02:04:00,256 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:04:31] 2025-07-28 02:04:00,276 | INFO     | cat /etc/os-release:
[2025-07-27 22:04:31] NAME="CentOS Linux"
[2025-07-27 22:04:31] VERSION="7 (Core)"
[2025-07-27 22:04:31] ID="centos"
[2025-07-27 22:04:31] ID_LIKE="rhel fedora"
[2025-07-27 22:04:31] VERSION_ID="7"
[2025-07-27 22:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:04:31] ANSI_COLOR="0;31"
[2025-07-27 22:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:04:31] HOME_URL="https://www.centos.org/"
[2025-07-27 22:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:04:31] 
[2025-07-27 22:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:04:31] 
[2025-07-27 22:04:31] 2025-07-28 02:04:00,276 | INFO     | ***************************************
[2025-07-27 22:04:31] 2025-07-28 02:04:00,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:04:31] 2025-07-28 02:04:00,799 | INFO     | sufficient remaining disk space (18709741568 B)
[2025-07-27 22:04:31] 2025-07-28 02:04:00,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:04:31] 2025-07-28 02:04:00,800 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:04:31] 2025-07-28 02:04:00,800 | INFO     | update_server=False
[2025-07-27 22:04:31] 2025-07-28 02:04:00,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:04:31] 2025-07-28 02:04:00,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:04:31] 2025-07-28 02:04:00,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:04:31] 2025-07-28 02:04:00,801 | INFO     | aborting loop
[2025-07-27 22:04:31] 2025-07-28 02:04:00,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:04:31] 2025-07-28 02:04:01,157 | INFO     | all job control threads have been joined
[2025-07-27 22:04:31] 2025-07-28 02:04:01,239 | INFO     | all data control threads have been joined
[2025-07-27 22:04:31] 2025-07-28 02:04:01,451 | INFO     | all payload control threads have been joined
[2025-07-27 22:04:31] 2025-07-28 02:04:01,806 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:01,807 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:01,808 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,163 | INFO     | [job] control thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,244 | INFO     | [data] control thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,288 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,313 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,456 | INFO     | [payload] control thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,527 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,549 | INFO     | [job] validate thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,805 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:02,921 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:03,101 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:03,199 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:03,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:04:31] 2025-07-28 02:04:07,484 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:11,605 | INFO     | job.realtimelogging is not enabled
[2025-07-27 22:04:31] 2025-07-28 02:04:12,613 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:04:31] 2025-07-28 02:04:12,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276570621760)>', '<ExcThread(monitor, started 140275770976000)>']
[2025-07-27 22:04:31] 2025-07-28 02:04:17,792 | INFO     | all workflow threads have been joined
[2025-07-27 22:04:31] 2025-07-28 02:04:17,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:04:31] 2025-07-28 02:04:17,792 | INFO     | traces error code: 0
[2025-07-27 22:04:31] 2025-07-28 02:04:17,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:04:31] 2025-07-28 02:04:29,626 | INFO     | 8649s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 22:04:31] 2025-07-28 02:04:30,752 | INFO     | PID=29829 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 22:04:31] 2025-07-28 02:04:30,753 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:04:31] 2025-07-28 02:04:30,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:04:31] 2025-07-28 02:04:30,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:04:31] 2025-07-28 02:04:30,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:04:31] 2025-07-28 02:04:30,753 | INFO     | [monitor] control thread has ended
[2025-07-27 22:04:31] 2025-07-28 02:04:30,878 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:04:31] 2025-07-28 02:04:30,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:04:31] 2025-07-28 02:04:30,889 [wrapper] pilotpid: 29829
[2025-07-27 22:04:31] 2025-07-28 02:04:30,894 [wrapper] Pilot exit status: 0
[2025-07-27 22:04:31] 2025-07-28 02:04:30,913 [wrapper] pandaids: 6747599423
[2025-07-27 22:04:31] 2025-07-28 02:04:30,965 [wrapper] cleanup supervisor_pilot  6077 29830
[2025-07-27 22:04:31] 2025-07-28 02:04:30,971 [wrapper] Test setup, not cleaning
[2025-07-27 22:04:31] 2025-07-28 02:04:30,975 [wrapper] apfmon messages muted
[2025-07-27 22:04:31] 2025-07-28 02:04:30,980 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:04:31] 2025-07-28 02:04:30,985 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:04:31]  *** Error codes and diagnostics ***
[2025-07-27 22:04:31]     "exeErrorCode": 0,
[2025-07-27 22:04:31]     "exeErrorDiag": "",
[2025-07-27 22:04:31]     "pilotErrorCode": 0,
[2025-07-27 22:04:31]     "pilotErrorDiag": "",
[2025-07-27 22:04:31]  *** Listing of results directory ***
[2025-07-27 22:04:31] total 351640
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 14:25 queuedata.json
[2025-07-27 22:04:31] -rwx------ 1 boincer umatlas     36292 Jul 27 14:28 runpilot2-wrapper.sh
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas       100 Jul 27 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:04:31] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 19:39 run_atlas
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas       105 Jul 27 19:39 job.xml
[2025-07-27 22:04:31] -rw-r--r-- 2 boincer umatlas 142504499 Jul 27 19:39 EVNT.45743347._002844.pool.root.1
[2025-07-27 22:04:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:39 start_atlas.sh
[2025-07-27 22:04:31] drwxrwx--x 2 boincer umatlas      4096 Jul 27 19:39 shared
[2025-07-27 22:04:31] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 19:39 input.tar.gz
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas         0 Jul 27 19:39 boinc_lockfile
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 19:39 pandaJob.out
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas    980125 Jul 27 19:39 agis_schedconf.cvmfs.json
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas   1593052 Jul 27 19:39 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:04:31] drwx------ 4 boincer umatlas      4096 Jul 27 19:39 pilot3
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas      5825 Jul 27 22:01 init_data.xml
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas 211443055 Jul 27 22:03 HITS.45743349._053807.pool.root.1
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas       529 Jul 27 22:03 boinc_task_state.xml
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas      1049 Jul 27 22:03 memory_monitor_summary.json
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas    345453 Jul 27 22:03 log.45743349._053807.job.log.tgz.1
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas        95 Jul 27 22:03 pilot_heartbeat.json
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas      7849 Jul 27 22:03 heartbeat.json
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 22:04 boinc_mmap_file
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas        27 Jul 27 22:04 wrapper_checkpoint.txt
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas       860 Jul 27 22:04 pilotlog.txt
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas    783506 Jul 27 22:04 log.45743349._053807.job.log.1
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas       357 Jul 27 22:04 output.list
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas       620 Jul 27 22:04 runtime_log
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas   1146880 Jul 27 22:04 result.tar.gz
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 22:04 runtime_log.err
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas       660 Jul 27 22:04 8anLDmpHL07n9Rq4apOajLDm4fhM0noT9bVof3QYDmbw2KDmlxisPo.diag
[2025-07-27 22:04:31] -rw-r--r-- 1 boincer umatlas     21134 Jul 27 22:04 stderr.txt
[2025-07-27 22:04:31] HITS file was successfully produced:
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas 211443055 Jul 27 22:03 shared/HITS.pool.root.1
[2025-07-27 22:04:31]  *** Contents of shared directory: ***
[2025-07-27 22:04:31] total 347328
[2025-07-27 22:04:31] -rw-r--r-- 2 boincer umatlas 142504499 Jul 27 19:39 ATLAS.root_0
[2025-07-27 22:04:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:39 start_atlas.sh
[2025-07-27 22:04:31] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 19:39 input.tar.gz
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas 211443055 Jul 27 22:03 HITS.pool.root.1
[2025-07-27 22:04:31] -rw------- 1 boincer umatlas   1146880 Jul 27 22:04 result.tar.gz
22:04:32 (26204): run_atlas exited; CPU time 64749.044255
22:04:32 (26204): called boinc_finish(0)

</stderr_txt>
]]>

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