Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:20:31 (1767313): wrapper (7.7.26015): starting
12:20:31 (1767313): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 12:20:31] Arguments: --nthreads 12
[2025-07-28 12:20:31] Threads: 12
[2025-07-28 12:20:31] Checking for CVMFS
[2025-07-28 12:20:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:20:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:20:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:20:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:20:33] 2.13.1.0 4095 5494 129732 148845 3 114 32625589 46080001 39619 130560 0 38182026 99.911 8612928 21697 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-28 12:20:33] CVMFS is ok
[2025-07-28 12:20:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 12:20:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 12:20:33] Further information can be found at the LHC@home message board.
[2025-07-28 12:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:20:33] Checking for apptainer binary...
[2025-07-28 12:20:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:20:33] Running /usr/bin/apptainer --version
[2025-07-28 12:20:33] apptainer version 1.4.1-1.el9
[2025-07-28 12:20:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:20:34] mff2104.farm.particle.cz
[2025-07-28 12:20:34] apptainer works
[2025-07-28 12:20:34] Set ATHENA_PROC_NUMBER=12
[2025-07-28 12:20:34] Set ATHENA_CORE_NUMBER=12
[2025-07-28 12:20:34] Starting ATLAS job with PandaID=6747579517
[2025-07-28 12:20:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 14:39:29]  *** The last 200 lines of the pilot log: ***
[2025-07-28 14:39:29] 2025-07-28 12:33:44,236 | INFO     | monitor loop #557: job 0:6747579517 is in state 'finished'
[2025-07-28 14:39:29] 2025-07-28 12:33:44,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,743 | INFO     | monitor loop #558: job 0:6747579517 is in state 'finished'
[2025-07-28 14:39:29] 2025-07-28 12:33:46,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,852 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 14:39:29] 2025-07-28 12:33:46,868 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2731.865395833333
[2025-07-28 14:39:29] 2025-07-28 12:33:46,885 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6747579517/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,886 | INFO     | extracted standard info from prmon json
[2025-07-28 14:39:29] 2025-07-28 12:33:46,886 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 14:39:29] 2025-07-28 12:33:46,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 14:39:29] 2025-07-28 12:33:46,886 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 14:39:29] 2025-07-28 12:33:46,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 14:39:29] 2025-07-28 12:33:46,888 | INFO     | fitting pss+swap vs Time
[2025-07-28 14:39:29] 2025-07-28 12:33:46,889 | INFO     | sum of square deviations: 620275131.9999986
[2025-07-28 14:39:29] 2025-07-28 12:33:46,889 | INFO     | sum of deviations: 33127987419.99997
[2025-07-28 14:39:29] 2025-07-28 12:33:46,890 | INFO     | mean x: 1753702126.6666667
[2025-07-28 14:39:29] 2025-07-28 12:33:46,890 | INFO     | mean y: 2603175.9523809524
[2025-07-28 14:39:29] 2025-07-28 12:33:46,890 | INFO     | -- intersect: -93660061976.06706
[2025-07-28 14:39:29] 2025-07-28 12:33:46,890 | INFO     | intersect: -93660061976.06706
[2025-07-28 14:39:29] 2025-07-28 12:33:46,890 | INFO     | chi2: 4.252979603674304
[2025-07-28 14:39:29] 2025-07-28 12:33:46,890 | INFO     | sum of square deviations: 549331369.3553733
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | sum of deviations: 40232479037.3306
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | mean x: 1753701974.1735537
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | mean y: 2617854.603305785
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | -- intersect: -128436757447.15352
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | intersect: -128436757447.15352
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | chi2: 3.5787660925343276
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | current chi2=3.5787660925343276 (change=15.852733235717823 %)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,891 | INFO     | right removable region: 120
[2025-07-28 14:39:29] 2025-07-28 12:33:46,892 | INFO     | sum of square deviations: 549318559.3553733
[2025-07-28 14:39:29] 2025-07-28 12:33:46,892 | INFO     | sum of deviations: -4898850416.677687
[2025-07-28 14:39:29] 2025-07-28 12:33:46,892 | INFO     | mean x: 1753702279.1735537
[2025-07-28 14:39:29] 2025-07-28 12:33:46,892 | INFO     | mean y: 2684463.4132231404
[2025-07-28 14:39:29] 2025-07-28 12:33:46,892 | INFO     | -- intersect: 15642289196.848192
[2025-07-28 14:39:29] 2025-07-28 12:33:46,892 | INFO     | intersect: 15642289196.848192
[2025-07-28 14:39:29] 2025-07-28 12:33:46,893 | INFO     | chi2: 0.9162952936020862
[2025-07-28 14:39:29] 2025-07-28 12:33:46,893 | INFO     | current chi2=0.9162952936020862 (change=78.45521542566381 %)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,893 | INFO     | sum of square deviations: 483989999.19827604
[2025-07-28 14:39:29] 2025-07-28 12:33:46,893 | INFO     | sum of deviations: -12038988724.64655
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | mean x: 1753702431.6810346
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | mean y: 2700858.3879310344
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | -- intersect: 43625097677.2609
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | intersect: 43625097677.2609
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | chi2: 0.7412625662723441
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | current chi2=0.7412625662723441 (change=19.10221830799367 %)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | left removable region: 20
[2025-07-28 14:39:29] 2025-07-28 12:33:46,894 | INFO     | sum of square deviations: 310071739.0000002
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | sum of deviations: -4241036711.099999
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | mean x: 1753702553.7
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | mean y: 2722916.93
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | -- intersect: 23989162102.19065
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | intersect: 23989162102.19065
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | chi2: 0.006114377040995591
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | -- intersect: 23989162102.19065
[2025-07-28 14:39:29] 2025-07-28 12:33:46,895 | INFO     | current memory leak: -13.68 B/s (using 100 data points, chi2=0.01)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | could have reported an average CPU frequency of 2744 MHz (8 samples)
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | ..............................
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | . Timing measurements:
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | . get job = 0 s
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | . initial setup = 3 s
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | . payload setup = 70 s
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | . stage-in = 0 s
[2025-07-28 14:39:29] 2025-07-28 12:33:46,896 | INFO     | . payload execution = 7699 s
[2025-07-28 14:39:29] 2025-07-28 12:33:46,897 | INFO     | . stage-out = 2 s
[2025-07-28 14:39:29] 2025-07-28 12:33:46,897 | INFO     | . log creation = 0 s
[2025-07-28 14:39:29] 2025-07-28 12:33:46,897 | INFO     | ..............................
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | 
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | job summary report
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | --------------------------------------------------
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | PanDA job id: 6747579517
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | task id: 45743349
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | errors: (none)
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | pilot state: finished 
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | transexitcode: 0
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | exeerrorcode: 0
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | exeerrordiag: 
[2025-07-28 14:39:29] 2025-07-28 12:33:47,015 | INFO     | exitcode: 0
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | exitmsg: OK
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | cpuconsumptiontime: 46783 s
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | nevents: 400
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | neventsw: 0
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | pid: 1832939
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | pgrp: 1832939
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | corecount: 12
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | event service: False
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | sizes: {0: 2397305, 1: 2397504, 12: 2397504, 23: 2397532, 33: 2397560, 38: 2397878, 44: 2398034, 7774: 2425755, 7776: 2434755, 7779: 2434811, 7828: 2435005}
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | --------------------------------------------------
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | 
[2025-07-28 14:39:29] 2025-07-28 12:33:47,016 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-07-28 14:39:29] 2025-07-28 12:33:47,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,182 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,182 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 14:39:29] 2025-07-28 12:33:47,184 | INFO     | job 6747579517 has completed (purged errors)
[2025-07-28 14:39:29] 2025-07-28 12:33:47,184 | INFO     | overall cleanup function is called
[2025-07-28 14:39:29] 2025-07-28 12:33:48,193 | INFO     | --- collectZombieJob: --- 10, [1832939]
[2025-07-28 14:39:29] 2025-07-28 12:33:48,194 | INFO     | zombie collector waiting for pid 1832939
[2025-07-28 14:39:29] 2025-07-28 12:33:48,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 14:39:29] 2025-07-28 12:33:48,194 | INFO     | collected zombie processes
[2025-07-28 14:39:29] 2025-07-28 12:33:48,194 | INFO     | will attempt to kill all subprocesses of pid=1832939
[2025-07-28 14:39:29] 2025-07-28 12:33:48,860 | INFO     | process IDs to be killed: [1832939] (in reverse order)
[2025-07-28 14:39:29] 2025-07-28 12:33:49,254 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 14:39:29] 2025-07-28 12:33:49,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 14:39:29] 2025-07-28 12:33:49,286 | INFO     | did not find any defunct processes belonging to 1832939
[2025-07-28 14:39:29] 2025-07-28 12:33:49,310 | INFO     | did not find any defunct processes belonging to 1832939
[2025-07-28 14:39:29] 2025-07-28 12:33:49,311 | INFO     | ready for new job
[2025-07-28 14:39:29] 2025-07-28 12:33:49,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 14:39:29] 2025-07-28 12:33:49,312 | INFO     | ***************************************
[2025-07-28 14:39:29] 2025-07-28 12:33:49,313 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 14:39:29] 2025-07-28 12:33:49,313 | INFO     | ***************************************
[2025-07-28 14:39:29] 2025-07-28 12:33:49,313 | INFO     | 
[2025-07-28 14:39:29] 2025-07-28 12:33:49,319 | INFO     | architecture information:
[2025-07-28 14:39:29] 2025-07-28 12:33:49,319 | INFO     | executing command: cat /etc/os-release
[2025-07-28 14:39:29] 2025-07-28 12:33:49,354 | INFO     | cat /etc/os-release:
[2025-07-28 14:39:29] NAME="CentOS Linux"
[2025-07-28 14:39:29] VERSION="7 (Core)"
[2025-07-28 14:39:29] ID="centos"
[2025-07-28 14:39:29] ID_LIKE="rhel fedora"
[2025-07-28 14:39:29] VERSION_ID="7"
[2025-07-28 14:39:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 14:39:29] ANSI_COLOR="0;31"
[2025-07-28 14:39:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 14:39:29] HOME_URL="https://www.centos.org/"
[2025-07-28 14:39:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 14:39:29] 
[2025-07-28 14:39:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 14:39:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 14:39:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 14:39:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 14:39:29] 
[2025-07-28 14:39:29] 2025-07-28 12:33:49,354 | INFO     | ***************************************
[2025-07-28 14:39:29] 2025-07-28 12:33:49,858 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-07-28 14:39:29] 2025-07-28 12:33:49,964 | INFO     | sufficient remaining disk space (1572508532736 B)
[2025-07-28 14:39:29] 2025-07-28 12:33:49,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 14:39:29] 2025-07-28 12:33:49,965 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 14:39:29] 2025-07-28 12:33:49,965 | INFO     | update_server=False
[2025-07-28 14:39:29] 2025-07-28 12:33:49,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 14:39:29] 2025-07-28 12:33:49,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 14:39:29] 2025-07-28 12:33:50,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 14:39:29] 2025-07-28 12:33:50,261 | INFO     | aborting loop
[2025-07-28 14:39:29] 2025-07-28 12:33:50,616 | INFO     | all job control threads have been joined
[2025-07-28 14:39:29] 2025-07-28 12:33:50,656 | INFO     | all data control threads have been joined
[2025-07-28 14:39:29] 2025-07-28 12:33:50,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 14:39:29] 2025-07-28 12:33:50,971 | INFO     | [job] retrieve thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,017 | INFO     | [data] copytool_in thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,040 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,077 | INFO     | [job] validate thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,158 | INFO     | all payload control threads have been joined
[2025-07-28 14:39:29] 2025-07-28 12:33:51,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,267 | INFO     | [job] job monitor thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,510 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,623 | INFO     | [job] control thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,663 | INFO     | [data] control thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,664 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:51,856 | INFO     | [payload] validate_post thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:52,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 14:39:29] 2025-07-28 12:33:52,160 | INFO     | [payload] failed_post thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:52,165 | INFO     | [payload] control thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:52,802 | INFO     | [data] copytool_out thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:53,031 | INFO     | [job] queue monitor thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:53,978 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 14:39:29] 2025-07-28 12:33:54,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252306675520)>', '<ExcThread(monitor, started 140251653715712)>']
[2025-07-28 14:39:29] 2025-07-28 12:33:59,971 | INFO     | all workflow threads have been joined
[2025-07-28 14:39:29] 2025-07-28 12:33:59,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 14:39:29] 2025-07-28 12:33:59,974 | INFO     | traces error code: 0
[2025-07-28 14:39:29] 2025-07-28 12:33:59,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 14:39:29] 2025-07-28 12:34:20,943 | INFO     | PID=1782518 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 14:39:29] 2025-07-28 12:34:20,946 | INFO     | .. there are 58 such processes running
[2025-07-28 14:39:29] 2025-07-28 12:34:20,946 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 14:39:29] 2025-07-28 12:34:20,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 14:39:29] 2025-07-28 12:34:20,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 14:39:29] 2025-07-28 12:34:20,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 14:39:29] 2025-07-28 12:34:20,946 | INFO     | [monitor] control thread has ended
[2025-07-28 14:39:29] 2025-07-28 12:34:21,199 [wrapper] ==== pilot stdout END ====
[2025-07-28 14:39:29] 2025-07-28 12:34:21,245 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 14:39:29] 2025-07-28 12:34:21,252 [wrapper] pilotpid: 1782518
[2025-07-28 14:39:29] 2025-07-28 12:34:21,292 [wrapper] Pilot exit status: 0
[2025-07-28 14:39:29] 2025-07-28 12:34:21,401 [wrapper] pandaids: 6747579517
[2025-07-28 14:39:29] 2025-07-28 12:34:21,767 [wrapper] cleanup supervisor_pilot 2104266 1782519
[2025-07-28 14:39:29] 2025-07-28 12:34:21,809 [wrapper] Test setup, not cleaning
[2025-07-28 14:39:29] 2025-07-28 12:34:21,838 [wrapper] apfmon messages muted
[2025-07-28 14:39:29] 2025-07-28 12:34:21,863 [wrapper] ==== wrapper stdout END ====
[2025-07-28 14:39:29] 2025-07-28 12:34:21,902 [wrapper] ==== wrapper stderr END ====
[2025-07-28 14:39:29]  *** Error codes and diagnostics ***
[2025-07-28 14:39:29]     "exeErrorCode": 0,
[2025-07-28 14:39:29]     "exeErrorDiag": "",
[2025-07-28 14:39:29]     "pilotErrorCode": 0,
[2025-07-28 14:39:29]     "pilotErrorDiag": "",
[2025-07-28 14:39:29]  *** Listing of results directory ***
[2025-07-28 14:39:29] total 353128
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc    530466 Jul 27 20:08 pilot3.tar.gz
[2025-07-28 14:39:29] -rwx------ 1 boinc boinc     36292 Jul 27 20:14 runpilot2-wrapper.sh
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc      5112 Jul 27 20:14 queuedata.json
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc       100 Jul 28 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 14:39:29] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 12:20 run_atlas
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc       105 Jul 28 12:20 job.xml
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc      6664 Jul 28 12:20 init_data.xml
[2025-07-28 14:39:29] -rw-r--r-- 2 boinc boinc 147625330 Jul 28 12:20 EVNT.45743347._002942.pool.root.1
[2025-07-28 14:39:29] drwxrwx--x 2 boinc boinc      4096 Jul 28 12:20 shared
[2025-07-28 14:39:29] -rw-r--r-- 2 boinc boinc    542892 Jul 28 12:20 input.tar.gz
[2025-07-28 14:39:29] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:20 start_atlas.sh
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc         0 Jul 28 12:20 boinc_lockfile
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc      2563 Jul 28 12:20 pandaJob.out
[2025-07-28 14:39:29] -rw------- 1 boinc boinc    978460 Jul 28 12:21 agis_schedconf.cvmfs.json
[2025-07-28 14:39:29] -rw------- 1 boinc boinc   1593052 Jul 28 12:21 agis_ddmendpoints.agis.ALL.json
[2025-07-28 14:39:29] drwx------ 4 boinc boinc      4096 Jul 28 12:21 pilot3
[2025-07-28 14:39:29] -rw------- 1 boinc boinc 207912266 Jul 28 14:31 HITS.45743349._053703.pool.root.1
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc       529 Jul 28 14:31 boinc_task_state.xml
[2025-07-28 14:39:29] -rw------- 1 boinc boinc      1026 Jul 28 14:32 memory_monitor_summary.json
[2025-07-28 14:39:29] -rw------- 1 boinc boinc    390852 Jul 28 14:32 log.45743349._053703.job.log.tgz.1
[2025-07-28 14:39:29] -rw------- 1 boinc boinc        95 Jul 28 14:33 pilot_heartbeat.json
[2025-07-28 14:39:29] -rw------- 1 boinc boinc      7783 Jul 28 14:33 heartbeat.json
[2025-07-28 14:39:29] -rw------- 1 boinc boinc       823 Jul 28 14:34 pilotlog.txt
[2025-07-28 14:39:29] -rw------- 1 boinc boinc    703965 Jul 28 14:34 log.45743349._053703.job.log.1
[2025-07-28 14:39:29] -rw------- 1 boinc boinc       357 Jul 28 14:34 output.list
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc       620 Jul 28 14:34 runtime_log
[2025-07-28 14:39:29] -rw------- 1 boinc boinc   1116160 Jul 28 14:34 result.tar.gz
[2025-07-28 14:39:29] -rw------- 1 boinc boinc       663 Jul 28 14:34 SMJKDmm4K07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA5VLDmj1Zjpn.diag
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc      8721 Jul 28 14:34 runtime_log.err
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc        26 Jul 28 14:39 wrapper_checkpoint.txt
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc      8192 Jul 28 14:39 boinc_mmap_file
[2025-07-28 14:39:29] -rw-r--r-- 1 boinc boinc     21287 Jul 28 14:39 stderr.txt
[2025-07-28 14:39:29] HITS file was successfully produced:
[2025-07-28 14:39:29] -rw------- 1 boinc boinc 207912266 Jul 28 14:31 shared/HITS.pool.root.1
[2025-07-28 14:39:29]  *** Contents of shared directory: ***
[2025-07-28 14:39:29] total 348856
[2025-07-28 14:39:29] -rw-r--r-- 2 boinc boinc 147625330 Jul 28 12:20 ATLAS.root_0
[2025-07-28 14:39:29] -rw-r--r-- 2 boinc boinc    542892 Jul 28 12:20 input.tar.gz
[2025-07-28 14:39:29] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:20 start_atlas.sh
[2025-07-28 14:39:29] -rw------- 1 boinc boinc 207912266 Jul 28 14:31 HITS.pool.root.1
[2025-07-28 14:39:29] -rw------- 1 boinc boinc   1116160 Jul 28 14:34 result.tar.gz
14:39:31 (1767313): run_atlas exited; CPU time 47107.256369
14:39:31 (1767313): called boinc_finish(0)

</stderr_txt>
]]>

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