Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:50:47 (1605111): wrapper (7.7.26015): starting
20:50:47 (1605111): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:50:47] Arguments: --nthreads 12
[2025-07-27 20:50:47] Threads: 12
[2025-07-27 20:50:47] Checking for CVMFS
[2025-07-27 20:50:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:50:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:50:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:50:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:50:47] 2.12.6.0 1263230 19107 337044 148829 1 215 17110016 32935936 10118 16776704 0 37276991 99.601 59467641 28915 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 20:50:47] CVMFS is ok
[2025-07-27 20:50:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:50:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:50:47] Further information can be found at the LHC@home message board.
[2025-07-27 20:50:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:50:47] Checking for apptainer binary...
[2025-07-27 20:50:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:50:47] Running /usr/bin/apptainer --version
[2025-07-27 20:50:47] apptainer version 1.4.1-1.el9
[2025-07-27 20:50:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:50:48] c6-5-7-2.aglt2.org
[2025-07-27 20:50:48] apptainer works
[2025-07-27 20:50:48] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:50:48] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:50:48] Starting ATLAS job with PandaID=6747579374
[2025-07-27 20:50:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:15:37]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:15:37]  scope=mc23_13p6TeV
[2025-07-27 22:15:37]  status=None
[2025-07-27 22:15:37]  status_code=0
[2025-07-27 22:15:37]  storage_token=
[2025-07-27 22:15:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747579374/log.45743349._053560.job.log.tgz.1
[2025-07-27 22:15:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/f2/log.45743349._053560.job.log.tgz.1
[2025-07-27 22:15:37]  workdir=None
[2025-07-27 22:15:37] ]
[2025-07-27 22:15:37] 2025-07-28 02:14:58,029 | INFO     | transferring file log.45743349._053560.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747579374/log.45743349._053560.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 22:15:37] 2025-07-28 02:14:58,030 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747579374/log.45743349._053560.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053560.job
[2025-07-27 22:15:37] 2025-07-28 02:14:58,049 | INFO     | monitor loop #370: job 0:6747579374 is in state 'stageout'
[2025-07-27 22:15:37] 2025-07-28 02:14:58,049 | INFO     | adding to output.list: log.45743349._053560.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/f2/log.45743349._053560.job.log.tg
[2025-07-27 22:15:37] 2025-07-28 02:14:58,049 | WARNING  | aborting job monitor tasks since payload process 1619196 is not running
[2025-07-27 22:15:37] 2025-07-28 02:14:58,050 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:15:37] 2025-07-28 02:14:58,050 | INFO     | summary of transferred files:
[2025-07-27 22:15:37] 2025-07-28 02:14:58,050 | INFO     |  -- lfn=log.45743349._053560.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:15:37] 2025-07-28 02:14:58,050 | INFO     | stage-out finished correctly
[2025-07-27 22:15:37] 2025-07-28 02:14:59,220 | INFO     | PID=1609453 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:15:37] 2025-07-28 02:14:59,221 | INFO     | .. there are 13 such processes running
[2025-07-27 22:15:37] 2025-07-28 02:14:59,630 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:15:37] 2025-07-28 02:15:00,551 | INFO     | monitor loop #371: job 0:6747579374 is in state 'finished'
[2025-07-27 22:15:37] 2025-07-28 02:15:00,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:15:37] 2025-07-28 02:15:01,770 | INFO     | job 6747579374 has state=finished
[2025-07-27 22:15:37] 2025-07-28 02:15:01,771 | INFO     | preparing for final server update for job 6747579374 in state='finished'
[2025-07-27 22:15:37] 2025-07-28 02:15:01,772 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:15:37] 2025-07-28 02:15:01,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:15:37] 2025-07-28 02:15:01,772 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:15:37] 2025-07-28 02:15:01,773 | INFO     | job 6747579374 has finished - writing final server update
[2025-07-27 22:15:37] 2025-07-28 02:15:01,773 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:15:37] 2025-07-28 02:15:01,774 | INFO     | executing command: lscpu
[2025-07-27 22:15:37] 2025-07-28 02:15:01,824 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:15:37] 2025-07-28 02:15:03,055 | INFO     | monitor loop #372: job 0:6747579374 is in state 'finished'
[2025-07-27 22:15:37] 2025-07-28 02:15:03,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:15:37] 2025-07-28 02:15:05,558 | INFO     | monitor loop #373: job 0:6747579374 is in state 'finished'
[2025-07-27 22:15:37] 2025-07-28 02:15:05,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:15:37] 2025-07-28 02:15:05,887 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 22:15:37] 2025-07-28 02:15:05,906 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2785.098053571429
[2025-07-27 22:15:37] 2025-07-28 02:15:05,913 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579374/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:15:37] 2025-07-28 02:15:05,914 | INFO     | extracted standard info from prmon json
[2025-07-27 22:15:37] 2025-07-28 02:15:05,914 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:15:37] 2025-07-28 02:15:05,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:15:37] 2025-07-28 02:15:05,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:15:37] 2025-07-28 02:15:05,914 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:15:37] 2025-07-28 02:15:05,916 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:15:37] 2025-07-28 02:15:05,916 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 22:15:37] 2025-07-28 02:15:05,916 | INFO     | sum of deviations: -14094160776.000002
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | mean x: 1753666456.0
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | mean y: 2495967.026666667
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | -- intersect: 188976130888.59662
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | intersect: 188976130888.59662
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | chi2: 0.16974215149204044
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | -- intersect: 188976130888.59662
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | current memory leak: -107.76 B/s (using 75 data points, chi2=0.17)
[2025-07-27 22:15:37] 2025-07-28 02:15:05,917 | INFO     | could have reported an average CPU frequency of 2690 MHz (6 samples)
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | ..............................
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . Timing measurements:
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . get job = 0 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . initial setup = 2 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . payload setup = 9 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . stage-in = 0 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . payload execution = 5004 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . stage-out = 0 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | . log creation = 0 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,918 | INFO     | ..............................
[2025-07-27 22:15:37] 2025-07-28 02:15:05,983 | INFO     | 
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | job summary report
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | --------------------------------------------------
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | PanDA job id: 6747579374
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | task id: 45743349
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | errors: (none)
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | pilot state: finished 
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | transexitcode: 0
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | exeerrorcode: 0
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | exeerrordiag: 
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | exitcode: 0
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | exitmsg: OK
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | cpuconsumptiontime: 49603 s
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | nevents: 400
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | neventsw: 0
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | pid: 1619196
[2025-07-27 22:15:37] 2025-07-28 02:15:05,984 | INFO     | pgrp: 1619196
[2025-07-27 22:15:37] 2025-07-28 02:15:05,985 | INFO     | corecount: 12
[2025-07-27 22:15:37] 2025-07-28 02:15:05,985 | INFO     | event service: False
[2025-07-27 22:15:37] 2025-07-28 02:15:05,985 | INFO     | sizes: {0: 2397302, 1: 2397501, 7: 2397763, 12: 2397791, 5017: 2423975, 5019: 2432973, 5021: 2433157, 5027: 2433351}
[2025-07-27 22:15:37] 2025-07-28 02:15:05,985 | INFO     | --------------------------------------------------
[2025-07-27 22:15:37] 2025-07-28 02:15:05,985 | INFO     | 
[2025-07-27 22:15:37] 2025-07-28 02:15:05,985 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:15:37] 2025-07-28 02:15:06,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,002 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,003 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:15:37] 2025-07-28 02:15:06,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,004 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:15:37] 2025-07-28 02:15:06,004 | INFO     | job 6747579374 has completed (purged errors)
[2025-07-27 22:15:37] 2025-07-28 02:15:06,004 | INFO     | overall cleanup function is called
[2025-07-27 22:15:37] 2025-07-28 02:15:07,011 | INFO     | --- collectZombieJob: --- 10, [1619196]
[2025-07-27 22:15:37] 2025-07-28 02:15:07,012 | INFO     | zombie collector waiting for pid 1619196
[2025-07-27 22:15:37] 2025-07-28 02:15:07,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:15:37] 2025-07-28 02:15:07,012 | INFO     | collected zombie processes
[2025-07-27 22:15:37] 2025-07-28 02:15:07,012 | INFO     | will attempt to kill all subprocesses of pid=1619196
[2025-07-27 22:15:37] 2025-07-28 02:15:07,292 | INFO     | process IDs to be killed: [1619196] (in reverse order)
[2025-07-27 22:15:37] 2025-07-28 02:15:07,405 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:15:37] 2025-07-28 02:15:07,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:15:37] 2025-07-28 02:15:07,418 | INFO     | did not find any defunct processes belonging to 1619196
[2025-07-27 22:15:37] 2025-07-28 02:15:07,432 | INFO     | did not find any defunct processes belonging to 1619196
[2025-07-27 22:15:37] 2025-07-28 02:15:07,432 | INFO     | ready for new job
[2025-07-27 22:15:37] 2025-07-28 02:15:07,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:15:37] 2025-07-28 02:15:07,434 | INFO     | ***************************************
[2025-07-27 22:15:37] 2025-07-28 02:15:07,435 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:15:37] 2025-07-28 02:15:07,435 | INFO     | ***************************************
[2025-07-27 22:15:37] 2025-07-28 02:15:07,435 | INFO     | 
[2025-07-27 22:15:37] 2025-07-28 02:15:07,450 | INFO     | architecture information:
[2025-07-27 22:15:37] 2025-07-28 02:15:07,451 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:15:37] 2025-07-28 02:15:07,465 | INFO     | cat /etc/os-release:
[2025-07-27 22:15:37] NAME="CentOS Linux"
[2025-07-27 22:15:37] VERSION="7 (Core)"
[2025-07-27 22:15:37] ID="centos"
[2025-07-27 22:15:37] ID_LIKE="rhel fedora"
[2025-07-27 22:15:37] VERSION_ID="7"
[2025-07-27 22:15:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:15:37] ANSI_COLOR="0;31"
[2025-07-27 22:15:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:15:37] HOME_URL="https://www.centos.org/"
[2025-07-27 22:15:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:15:37] 
[2025-07-27 22:15:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:15:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:15:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:15:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:15:37] 
[2025-07-27 22:15:37] 2025-07-28 02:15:07,465 | INFO     | ***************************************
[2025-07-27 22:15:37] 2025-07-28 02:15:07,968 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:15:37] 2025-07-28 02:15:07,988 | INFO     | sufficient remaining disk space (76537659392 B)
[2025-07-27 22:15:37] 2025-07-28 02:15:07,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:15:37] 2025-07-28 02:15:07,989 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:15:37] 2025-07-28 02:15:07,989 | INFO     | update_server=False
[2025-07-27 22:15:37] 2025-07-28 02:15:07,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:15:37] 2025-07-28 02:15:08,060 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 22:15:37] 2025-07-28 02:15:08,061 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 22:15:37] 2025-07-28 02:15:08,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:15:37] 2025-07-28 02:15:08,061 | INFO     | will abort loop
[2025-07-27 22:15:37] 2025-07-28 02:15:08,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:15:37] 2025-07-28 02:15:08,877 | INFO     | all job control threads have been joined
[2025-07-27 22:15:37] 2025-07-28 02:15:08,977 | INFO     | all data control threads have been joined
[2025-07-27 22:15:37] 2025-07-28 02:15:08,994 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,052 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,065 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,279 | INFO     | all payload control threads have been joined
[2025-07-27 22:15:37] 2025-07-28 02:15:09,491 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,758 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,882 | INFO     | [job] control thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,941 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,952 | INFO     | [job] validate thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:09,983 | INFO     | [data] control thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:10,205 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:15:37] 2025-07-28 02:15:10,285 | INFO     | [payload] control thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:10,305 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:10,442 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:10,613 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:10,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:15:37] 2025-07-28 02:15:11,998 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:14,210 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:15:37] 2025-07-28 02:15:15,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462688302912)>', '<ExcThread(monitor, started 140462048397056)>']
[2025-07-27 22:15:37] 2025-07-28 02:15:20,038 | INFO     | all workflow threads have been joined
[2025-07-27 22:15:37] 2025-07-28 02:15:20,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:15:37] 2025-07-28 02:15:20,040 | INFO     | traces error code: 0
[2025-07-27 22:15:37] 2025-07-28 02:15:20,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:15:37] 2025-07-28 02:15:37,636 | INFO     | PID=1609453 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:15:37] 2025-07-28 02:15:37,636 | INFO     | .. there are 13 such processes running
[2025-07-27 22:15:37] 2025-07-28 02:15:37,636 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:15:37] 2025-07-28 02:15:37,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:15:37] 2025-07-28 02:15:37,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:15:37] 2025-07-28 02:15:37,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:15:37] 2025-07-28 02:15:37,636 | INFO     | [monitor] control thread has ended
[2025-07-27 22:15:37] 2025-07-28 02:15:37,788 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:15:37] 2025-07-28 02:15:37,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:15:37] 2025-07-28 02:15:37,797 [wrapper] pilotpid: 1609453
[2025-07-27 22:15:37] 2025-07-28 02:15:37,801 [wrapper] Pilot exit status: 0
[2025-07-27 22:15:37] 2025-07-28 02:15:37,817 [wrapper] pandaids: 6747579374
[2025-07-27 22:15:37] 2025-07-28 02:15:37,897 [wrapper] cleanup supervisor_pilot 1804386 1609454
[2025-07-27 22:15:37] 2025-07-28 02:15:37,900 [wrapper] Test setup, not cleaning
[2025-07-27 22:15:37] 2025-07-28 02:15:37,904 [wrapper] apfmon messages muted
[2025-07-27 22:15:37] 2025-07-28 02:15:37,908 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:15:37] 2025-07-28 02:15:37,911 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:15:37]  *** Error codes and diagnostics ***
[2025-07-27 22:15:37]     "exeErrorCode": 0,
[2025-07-27 22:15:37]     "exeErrorDiag": "",
[2025-07-27 22:15:37]     "pilotErrorCode": 0,
[2025-07-27 22:15:37]     "pilotErrorDiag": "",
[2025-07-27 22:15:37]  *** Listing of results directory ***
[2025-07-27 22:15:37] total 353388
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:11 queuedata.json
[2025-07-27 22:15:37] -rwx------. 1 boincer umatlas     36292 Jul 27 14:11 runpilot2-wrapper.sh
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:15:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:50 run_atlas
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:50 job.xml
[2025-07-27 22:15:37] -rw-r--r--. 2 boincer umatlas 145690129 Jul 27 20:50 EVNT.45743347._002933.pool.root.1
[2025-07-27 22:15:37] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 20:50 input.tar.gz
[2025-07-27 22:15:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:50 start_atlas.sh
[2025-07-27 22:15:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:50 shared
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:50 boinc_lockfile
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 20:50 pandaJob.out
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas    980125 Jul 27 20:50 agis_schedconf.cvmfs.json
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:51 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:15:37] drwx------. 4 boincer umatlas      4096 Jul 27 20:51 pilot3
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 22:12 init_data.xml
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas 210598729 Jul 27 22:14 HITS.45743349._053560.pool.root.1
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas       530 Jul 27 22:14 boinc_task_state.xml
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas        95 Jul 27 22:14 pilot_heartbeat.json
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas      1036 Jul 27 22:14 memory_monitor_summary.json
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas    360926 Jul 27 22:14 log.45743349._053560.job.log.tgz.1
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas      7819 Jul 27 22:15 heartbeat.json
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 22:15 boinc_mmap_file
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas        27 Jul 27 22:15 wrapper_checkpoint.txt
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas       823 Jul 27 22:15 pilotlog.txt
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas    492962 Jul 27 22:15 log.45743349._053560.job.log.1
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas       357 Jul 27 22:15 output.list
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas       620 Jul 27 22:15 runtime_log
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas    870400 Jul 27 22:15 result.tar.gz
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 22:15 runtime_log.err
[2025-07-27 22:15:37] -rw-------. 1 boincer umatlas       653 Jul 27 22:15 dfmNDmp1K07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD4VLDmqFHQJn.diag
[2025-07-27 22:15:37] -rw-r--r--. 1 boincer umatlas     22066 Jul 27 22:15 stderr.txt
[2025-07-27 22:15:38] HITS file was successfully produced:
[2025-07-27 22:15:38] -rw-------. 1 boincer umatlas 210598729 Jul 27 22:14 shared/HITS.pool.root.1
[2025-07-27 22:15:38]  *** Contents of shared directory: ***
[2025-07-27 22:15:38] total 349344
[2025-07-27 22:15:38] -rw-r--r--. 2 boincer umatlas 145690129 Jul 27 20:50 ATLAS.root_0
[2025-07-27 22:15:38] -rw-r--r--. 2 boincer umatlas    542894 Jul 27 20:50 input.tar.gz
[2025-07-27 22:15:38] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:50 start_atlas.sh
[2025-07-27 22:15:38] -rw-------. 1 boincer umatlas 210598729 Jul 27 22:14 HITS.pool.root.1
[2025-07-27 22:15:38] -rw-------. 1 boincer umatlas    870400 Jul 27 22:15 result.tar.gz
22:15:39 (1605111): run_atlas exited; CPU time 49668.446238
22:15:39 (1605111): called boinc_finish(0)

</stderr_txt>
]]>

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