Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:53:52 (3236447): wrapper (7.7.26015): starting
13:53:52 (3236447): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 13:53:52] Arguments: --nthreads 3
[2025-07-28 13:53:52] Threads: 3
[2025-07-28 13:53:52] Checking for CVMFS
[2025-07-28 13:53:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 13:53:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 13:53:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 13:53:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 13:53:53] 2.9.2.0 353539 6001 65960 148847 2 56 36737615 36864001 0 130560 0 3885550 99.989 218359 2404 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 13:53:53] CVMFS is ok
[2025-07-28 13:53:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 13:53:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 13:53:53] Further information can be found at the LHC@home message board.
[2025-07-28 13:53:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 13:53:53] Checking for apptainer binary...
[2025-07-28 13:53:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 13:53:53] Running /usr/bin/apptainer --version
[2025-07-28 13:53:53] apptainer version 1.3.6-4.1
[2025-07-28 13:53:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 13:53:53] atlasA219a
[2025-07-28 13:53:53] apptainer works
[2025-07-28 13:53:53] Set ATHENA_PROC_NUMBER=3
[2025-07-28 13:53:53] Set ATHENA_CORE_NUMBER=3
[2025-07-28 13:53:53] Starting ATLAS job with PandaID=6747579478
[2025-07-28 13:53:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:50:38 (3269490): wrapper (7.7.26015): starting
14:50:38 (3269490): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 14:50:38] Arguments: --nthreads 3
[2025-07-28 14:50:38] Threads: 3
[2025-07-28 14:50:38] This job has been restarted, cleaning up previous attempt
[2025-07-28 14:50:38] Checking for CVMFS
[2025-07-28 14:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 14:50:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 14:50:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 14:50:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 14:50:40] 2.9.2.0 3269615 0 29620 148848 3 1 36741647 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 14:50:40] CVMFS is ok
[2025-07-28 14:50:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 14:50:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 14:50:40] Further information can be found at the LHC@home message board.
[2025-07-28 14:50:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:50:40] Checking for apptainer binary...
[2025-07-28 14:50:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 14:50:40] Running /usr/bin/apptainer --version
[2025-07-28 14:50:40] apptainer version 1.3.6-4.1
[2025-07-28 14:50:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:50:40] atlasA219a
[2025-07-28 14:50:40] apptainer works
[2025-07-28 14:50:40] Set ATHENA_PROC_NUMBER=3
[2025-07-28 14:50:40] Set ATHENA_CORE_NUMBER=3
[2025-07-28 14:50:40] Starting ATLAS job with PandaID=6747579478
[2025-07-28 14:50:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 16:42:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 16:42:54] 2025-07-28 14:42:21,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 16:42:54] 2025-07-28 14:42:21,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 16:42:54] 2025-07-28 14:42:21,878 | INFO     | fitting pss+swap vs Time
[2025-07-28 16:42:54] 2025-07-28 14:42:21,878 | INFO     | sum of square deviations: 412686807.5
[2025-07-28 16:42:54] 2025-07-28 14:42:21,878 | INFO     | sum of deviations: -7466428578.499999
[2025-07-28 16:42:54] 2025-07-28 14:42:21,878 | INFO     | mean x: 1753710394.5
[2025-07-28 16:42:54] 2025-07-28 14:42:21,878 | INFO     | mean y: 2356079.3181818184
[2025-07-28 16:42:54] 2025-07-28 14:42:21,878 | INFO     | -- intersect: 31730904629.800518
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | intersect: 31730904629.800518
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | chi2: 2.226959598595781
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | sum of square deviations: 358927660.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | sum of deviations: -836095768.0000007
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | mean x: 1753710242.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | mean y: 2374243.838095238
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | -- intersect: 4087514162.1003356
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | intersect: 4087514162.1003356
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | chi2: 1.6043073415176836
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | current chi2=1.6043073415176836 (change=27.95974643952739 %)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | sum of deviations: -484862983.4999988
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | mean x: 1753710089.5
[2025-07-28 16:42:54] 2025-07-28 14:42:21,879 | INFO     | mean y: 2375340.45
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | -- intersect: 2744845038.7147036
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | intersect: 2744845038.7147036
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | chi2: 1.6060423021477641
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | current chi2=1.6060423021477641 (change=-0.10814390641877966 %)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | right removable region: 99
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | sum of square deviations: 358927660.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | sum of deviations: -21113070510.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | mean x: 1753710547.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | mean y: 2393741.4095238093
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | -- intersect: 103160268041.04324
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | intersect: 103160268041.04324
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | chi2: 0.7842838361410227
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | current chi2=0.7842838361410227 (change=64.7823051376614 %)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | sum of square deviations: 310052325.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,880 | INFO     | sum of deviations: -15998759505.999998
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | mean x: 1753710699.5
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | mean y: 2377759.76
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | -- intersect: 90494186600.0889
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | intersect: 90494186600.0889
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | chi2: 0.7581430974940856
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | current chi2=0.7581430974940856 (change=3.3330711972287443 %)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | left removable region: 20
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | sum of square deviations: 152858680.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | sum of deviations: -2057032484.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | mean x: 1753710669.0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | mean y: 2371185.7848101268
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | -- intersect: 23602207411.443516
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | intersect: 23602207411.443516
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | chi2: 0.028551377554045635
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | -- intersect: 23602207411.443516
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | current memory leak: -13.46 B/s (using 79 data points, chi2=0.03)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | could have reported an average CPU frequency of 4174 MHz (7 samples)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | ..............................
[2025-07-28 16:42:54] 2025-07-28 14:42:21,881 | INFO     | . Timing measurements:
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | . get job = 0 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | . initial setup = 0 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | . payload setup = 3 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | . stage-in = 0 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | . payload execution = 6659 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | . stage-out = 0 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | . log creation = 0 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,882 | INFO     | ..............................
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | 
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | job summary report
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | --------------------------------------------------
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | PanDA job id: 6747579478
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | task id: 45743349
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | errors: (none)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 16:42:54] 2025-07-28 14:42:21,914 | INFO     | pilot state: finished 
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | transexitcode: 0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | exeerrorcode: 0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | exeerrordiag: 
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | exitcode: 0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | exitmsg: OK
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | cpuconsumptiontime: 19262 s
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | nevents: 400
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | neventsw: 0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | pid: 3280221
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | pgrp: 3280221
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | corecount: 3
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | event service: False
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | sizes: {0: 2397476, 3: 2397738, 11: 2397766, 6666: 2424991, 6667: 2424990, 6668: 2434050, 6671: 2434234, 6679: 2434428}
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | --------------------------------------------------
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | 
[2025-07-28 16:42:54] 2025-07-28 14:42:21,915 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 16:42:54] 2025-07-28 14:42:21,927 | INFO     | job 6747579478 has completed (purged errors)
[2025-07-28 16:42:54] 2025-07-28 14:42:21,928 | INFO     | overall cleanup function is called
[2025-07-28 16:42:54] 2025-07-28 14:42:22,933 | INFO     | --- collectZombieJob: --- 10, [3280221]
[2025-07-28 16:42:54] 2025-07-28 14:42:22,934 | INFO     | zombie collector waiting for pid 3280221
[2025-07-28 16:42:54] 2025-07-28 14:42:22,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 16:42:54] 2025-07-28 14:42:22,934 | INFO     | collected zombie processes
[2025-07-28 16:42:54] 2025-07-28 14:42:22,934 | INFO     | will attempt to kill all subprocesses of pid=3280221
[2025-07-28 16:42:54] 2025-07-28 14:42:22,977 | INFO     | process IDs to be killed: [3280221] (in reverse order)
[2025-07-28 16:42:54] 2025-07-28 14:42:23,002 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 16:42:54] 2025-07-28 14:42:23,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 16:42:54] 2025-07-28 14:42:23,004 | INFO     | did not find any defunct processes belonging to 3280221
[2025-07-28 16:42:54] 2025-07-28 14:42:23,005 | INFO     | did not find any defunct processes belonging to 3280221
[2025-07-28 16:42:54] 2025-07-28 14:42:23,005 | INFO     | ready for new job
[2025-07-28 16:42:54] 2025-07-28 14:42:23,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 16:42:54] 2025-07-28 14:42:23,006 | INFO     | ***************************************
[2025-07-28 16:42:54] 2025-07-28 14:42:23,006 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 16:42:54] 2025-07-28 14:42:23,006 | INFO     | ***************************************
[2025-07-28 16:42:54] 2025-07-28 14:42:23,006 | INFO     | 
[2025-07-28 16:42:54] 2025-07-28 14:42:23,006 | INFO     | architecture information:
[2025-07-28 16:42:54] 2025-07-28 14:42:23,006 | INFO     | executing command: cat /etc/os-release
[2025-07-28 16:42:54] 2025-07-28 14:42:23,017 | INFO     | cat /etc/os-release:
[2025-07-28 16:42:54] NAME="CentOS Linux"
[2025-07-28 16:42:54] VERSION="7 (Core)"
[2025-07-28 16:42:54] ID="centos"
[2025-07-28 16:42:54] ID_LIKE="rhel fedora"
[2025-07-28 16:42:54] VERSION_ID="7"
[2025-07-28 16:42:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 16:42:54] ANSI_COLOR="0;31"
[2025-07-28 16:42:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 16:42:54] HOME_URL="https://www.centos.org/"
[2025-07-28 16:42:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 16:42:54] 
[2025-07-28 16:42:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 16:42:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 16:42:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 16:42:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 16:42:54] 
[2025-07-28 16:42:54] 2025-07-28 14:42:23,017 | INFO     | ***************************************
[2025-07-28 16:42:54] 2025-07-28 14:42:23,520 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 16:42:54] 2025-07-28 14:42:23,529 | INFO     | sufficient remaining disk space (821496381440 B)
[2025-07-28 16:42:54] 2025-07-28 14:42:23,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 16:42:54] 2025-07-28 14:42:23,529 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 16:42:54] 2025-07-28 14:42:23,530 | INFO     | update_server=False
[2025-07-28 16:42:54] 2025-07-28 14:42:23,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 16:42:54] 2025-07-28 14:42:23,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 16:42:54] 2025-07-28 14:42:23,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:42:54] 2025-07-28 14:42:23,873 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 16:42:54] 2025-07-28 14:42:23,873 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 16:42:54] 2025-07-28 14:42:23,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 16:42:54] 2025-07-28 14:42:23,873 | INFO     | will abort loop
[2025-07-28 16:42:54] 2025-07-28 14:42:23,914 | INFO     | all job control threads have been joined
[2025-07-28 16:42:54] 2025-07-28 14:42:24,044 | INFO     | all payload control threads have been joined
[2025-07-28 16:42:54] 2025-07-28 14:42:24,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 16:42:54] 2025-07-28 14:42:24,280 | INFO     | all data control threads have been joined
[2025-07-28 16:42:54] 2025-07-28 14:42:24,534 | INFO     | [job] retrieve thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:24,535 | INFO     | [job] queue monitor thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:24,853 | INFO     | [payload] validate_post thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:24,878 | INFO     | [job] job monitor thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:24,919 | INFO     | [job] control thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,049 | INFO     | [payload] control thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,098 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,126 | INFO     | [data] copytool_in thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,285 | INFO     | [data] control thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,535 | INFO     | [data] copytool_out thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,577 | INFO     | [job] validate thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,750 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,805 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:25,914 | INFO     | [payload] failed_post thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:28,194 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:33,793 | INFO     | job.realtimelogging is not enabled
[2025-07-28 16:42:54] 2025-07-28 14:42:34,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 16:42:54] 2025-07-28 14:42:36,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803199493952)>', '<ExcThread(monitor, started 139802569590528)>']
[2025-07-28 16:42:54] 2025-07-28 14:42:41,374 | INFO     | all workflow threads have been joined
[2025-07-28 16:42:54] 2025-07-28 14:42:41,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 16:42:54] 2025-07-28 14:42:41,375 | INFO     | traces error code: 0
[2025-07-28 16:42:54] 2025-07-28 14:42:41,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 16:42:54] 2025-07-28 14:42:54,552 | INFO     | PID=3273661 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 16:42:54] 2025-07-28 14:42:54,552 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 16:42:54] 2025-07-28 14:42:54,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 16:42:54] 2025-07-28 14:42:54,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 16:42:54] 2025-07-28 14:42:54,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 16:42:54] 2025-07-28 14:42:54,553 | INFO     | [monitor] control thread has ended
[2025-07-28 16:42:54] 2025-07-28 14:42:54,601 [wrapper] ==== pilot stdout END ====
[2025-07-28 16:42:54] 2025-07-28 14:42:54,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 16:42:54] 2025-07-28 14:42:54,606 [wrapper] pilotpid: 3273661
[2025-07-28 16:42:54] 2025-07-28 14:42:54,609 [wrapper] Pilot exit status: 0
[2025-07-28 16:42:54] 2025-07-28 14:42:54,616 [wrapper] pandaids: 6747579478 6747579478
[2025-07-28 16:42:54] 2025-07-28 14:42:54,634 [wrapper] cleanup supervisor_pilot 3319338 3273662
[2025-07-28 16:42:54] 2025-07-28 14:42:54,637 [wrapper] Test setup, not cleaning
[2025-07-28 16:42:54] 2025-07-28 14:42:54,639 [wrapper] apfmon messages muted
[2025-07-28 16:42:54] 2025-07-28 14:42:54,642 [wrapper] ==== wrapper stdout END ====
[2025-07-28 16:42:54] 2025-07-28 14:42:54,644 [wrapper] ==== wrapper stderr END ====
[2025-07-28 16:42:54]  *** Error codes and diagnostics ***
[2025-07-28 16:42:54]     "exeErrorCode": 0,
[2025-07-28 16:42:54]     "exeErrorDiag": "",
[2025-07-28 16:42:54]     "pilotErrorCode": 0,
[2025-07-28 16:42:54]     "pilotErrorDiag": "",
[2025-07-28 16:42:54]  *** Listing of results directory ***
[2025-07-28 16:42:54] total 501960
[2025-07-28 16:42:54] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc    530466 Jul 27 20:08 pilot3.tar.gz
[2025-07-28 16:42:54] -rwx------ 1 boinc boinc     36292 Jul 27 20:14 runpilot2-wrapper.sh
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc      5112 Jul 27 20:14 queuedata.json
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc       100 Jul 28 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 16:42:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 13:53 run_atlas
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc       105 Jul 28 13:53 job.xml
[2025-07-28 16:42:54] -rw-r--r-- 3 boinc boinc 145879813 Jul 28 13:53 EVNT.45743347._002940.pool.root.1
[2025-07-28 16:42:54] -rw-r--r-- 3 boinc boinc 145879813 Jul 28 13:53 ATLAS.root_0
[2025-07-28 16:42:54] drwxrwx--x 2 boinc boinc      4096 Jul 28 13:53 shared
[2025-07-28 16:42:54] -rw-r--r-- 2 boinc boinc    542887 Jul 28 13:53 input.tar.gz
[2025-07-28 16:42:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 13:53 start_atlas.sh
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc         0 Jul 28 13:53 boinc_lockfile
[2025-07-28 16:42:54] -rw------- 1 boinc boinc   1593052 Jul 28 13:53 agis_ddmendpoints.agis.ALL.json
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc      6687 Jul 28 14:50 init_data.xml
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc      2562 Jul 28 14:50 pandaJob.out
[2025-07-28 16:42:54] -rw------- 1 boinc boinc    977006 Jul 28 14:50 agis_schedconf.cvmfs.json
[2025-07-28 16:42:54] -rw------- 1 boinc boinc 216620808 Jul 28 16:41 HITS.45743349._053664.pool.root.1
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc       529 Jul 28 16:41 boinc_task_state.xml
[2025-07-28 16:42:54] -rw------- 1 boinc boinc      1014 Jul 28 16:42 memory_monitor_summary.json
[2025-07-28 16:42:54] -rw------- 1 boinc boinc    234471 Jul 28 16:42 log.45743349._053664.job.log.tgz.1
[2025-07-28 16:42:54] -rw------- 1 boinc boinc      7757 Jul 28 16:42 heartbeat.json
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc      8192 Jul 28 16:42 boinc_mmap_file
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc        27 Jul 28 16:42 wrapper_checkpoint.txt
[2025-07-28 16:42:54] -rw------- 1 boinc boinc       747 Jul 28 16:42 pilotlog.txt
[2025-07-28 16:42:54] -rw------- 1 boinc boinc        96 Jul 28 16:42 pilot_heartbeat.json
[2025-07-28 16:42:54] -rw------- 1 boinc boinc    635898 Jul 28 16:42 log.45743349._053664.job.log.1
[2025-07-28 16:42:54] -rw------- 1 boinc boinc       357 Jul 28 16:42 output.list
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc       620 Jul 28 16:42 runtime_log
[2025-07-28 16:42:54] -rw------- 1 boinc boinc    890880 Jul 28 16:42 result.tar.gz
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc      8839 Jul 28 16:42 runtime_log.err
[2025-07-28 16:42:54] -rw------- 1 boinc boinc       788 Jul 28 16:42 VUtNDml4K07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmy4VLDmT1fyzm.diag
[2025-07-28 16:42:54] -rw-r--r-- 1 boinc boinc     23019 Jul 28 16:42 stderr.txt
[2025-07-28 16:42:54] HITS file was successfully produced:
[2025-07-28 16:42:54] -rw------- 1 boinc boinc 216620808 Jul 28 16:41 shared/HITS.pool.root.1
[2025-07-28 16:42:54]  *** Contents of shared directory: ***
[2025-07-28 16:42:54] total 355436
[2025-07-28 16:42:54] -rw-r--r-- 3 boinc boinc 145879813 Jul 28 13:53 ATLAS.root_0
[2025-07-28 16:42:54] -rw-r--r-- 2 boinc boinc    542887 Jul 28 13:53 input.tar.gz
[2025-07-28 16:42:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 13:53 start_atlas.sh
[2025-07-28 16:42:54] -rw------- 1 boinc boinc 216620808 Jul 28 16:41 HITS.pool.root.1
[2025-07-28 16:42:54] -rw------- 1 boinc boinc    890880 Jul 28 16:42 result.tar.gz
16:42:55 (3269490): run_atlas exited; CPU time 19301.078390
16:42:55 (3269490): called boinc_finish(0)

</stderr_txt>
]]>

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