Name yBkNDmT1K07n9Rq4apOajLDm4fhM0noT9bVof3QYDmwu2KDmDOoo3n_1
Workunit 233837181
Created 27 Jul 2025, 20:53:58 UTC
Sent 27 Jul 2025, 23:30:44 UTC
Report deadline 4 Aug 2025, 23:30:44 UTC
Received 28 Jul 2025, 16:20:40 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10852146
Run time 4 hours 39 min 3 sec
CPU time 17 hours 50 min 7 sec
Validate state Valid
Credit 546.39
Device peak FLOPS 20.53 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.52 GB
Peak swap size 14.65 GB
Peak disk usage 490.34 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:36:17 (26660): wrapper (7.7.26015): starting
13:36:17 (26660): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 13:36:17] Arguments: --nthreads 8
[2025-07-28 13:36:17] Threads: 8
[2025-07-28 13:36:17] Checking for CVMFS
[2025-07-28 13:36:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 13:36:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 13:36:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 13:36:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 13:36:19] 2.11.2.0 555 111028 138860 148847 3 109 24584316 25165824 4353 130560 0 69618520 99.839 51740806 4070 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 13:36:19] CVMFS is ok
[2025-07-28 13:36:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 13:36:19] Checking for apptainer binary...
[2025-07-28 13:36:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 13:36:19] Running /usr/bin/apptainer --version
[2025-07-28 13:36:19] apptainer version 1.3.2-1.el7
[2025-07-28 13:36:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 13:36:20] cg-vwn340.simple-grid.lan
[2025-07-28 13:36:20] apptainer works
[2025-07-28 13:36:20] Set ATHENA_PROC_NUMBER=8
[2025-07-28 13:36:20] Set ATHENA_CORE_NUMBER=8
[2025-07-28 13:36:20] Starting ATLAS job with PandaID=6747579313
[2025-07-28 13:36:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 18:16:57]  *** The last 200 lines of the pilot log: ***
[2025-07-28 18:16:57] 2025-07-28 16:16:20,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 18:16:57] 2025-07-28 16:16:22,864 | INFO     | monitor loop #1157: job 0:6747579313 is in state 'finished'
[2025-07-28 18:16:57] 2025-07-28 16:16:22,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,020 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 18:16:57] 2025-07-28 16:16:24,021 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-28 18:16:57] 2025-07-28 16:16:24,023 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6747579313/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,023 | INFO     | extracted standard info from prmon json
[2025-07-28 18:16:57] 2025-07-28 16:16:24,024 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 18:16:57] 2025-07-28 16:16:24,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 18:16:57] 2025-07-28 16:16:24,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 18:16:57] 2025-07-28 16:16:24,024 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 18:16:57] 2025-07-28 16:16:24,030 | INFO     | fitting pss+swap vs Time
[2025-07-28 18:16:57] 2025-07-28 16:16:24,031 | INFO     | sum of square deviations: 6309000152.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,033 | INFO     | sum of deviations: 5763083884.999996
[2025-07-28 18:16:57] 2025-07-28 16:16:24,034 | INFO     | mean x: 1753710952.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,034 | INFO     | mean y: 2520524.358974359
[2025-07-28 18:16:57] 2025-07-28 16:16:24,034 | INFO     | -- intersect: -1599442240.4089541
[2025-07-28 18:16:57] 2025-07-28 16:16:24,034 | INFO     | intersect: -1599442240.4089541
[2025-07-28 18:16:57] 2025-07-28 16:16:24,035 | INFO     | chi2: 1.947170399160019
[2025-07-28 18:16:57] 2025-07-28 16:16:24,035 | INFO     | sum of square deviations: 5968658887.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,038 | INFO     | sum of deviations: 5856652303.499995
[2025-07-28 18:16:57] 2025-07-28 16:16:24,038 | INFO     | mean x: 1753710799.5
[2025-07-28 18:16:57] 2025-07-28 16:16:24,038 | INFO     | mean y: 2520566.302238806
[2025-07-28 18:16:57] 2025-07-28 16:16:24,038 | INFO     | -- intersect: -1718280469.2427657
[2025-07-28 18:16:57] 2025-07-28 16:16:24,038 | INFO     | intersect: -1718280469.2427657
[2025-07-28 18:16:57] 2025-07-28 16:16:24,038 | INFO     | chi2: 1.9476355388192372
[2025-07-28 18:16:57] 2025-07-28 16:16:24,039 | INFO     | current chi2=1.9476355388192372 (change=-0.023887979162932133 %)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,039 | INFO     | right removable region: 267
[2025-07-28 18:16:57] 2025-07-28 16:16:24,039 | INFO     | sum of square deviations: 5968658887.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,042 | INFO     | sum of deviations: -44801449877.99999
[2025-07-28 18:16:57] 2025-07-28 16:16:24,042 | INFO     | mean x: 1753711104.5
[2025-07-28 18:16:57] 2025-07-28 16:16:24,042 | INFO     | mean y: 2543033.73880597
[2025-07-28 18:16:57] 2025-07-28 16:16:24,042 | INFO     | -- intersect: 13166103162.778017
[2025-07-28 18:16:57] 2025-07-28 16:16:24,042 | INFO     | intersect: 13166103162.778017
[2025-07-28 18:16:57] 2025-07-28 16:16:24,044 | INFO     | chi2: 0.20975482702918075
[2025-07-28 18:16:57] 2025-07-28 16:16:24,044 | INFO     | current chi2=0.20975482702918075 (change=89.22771077869375 %)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,044 | INFO     | sum of square deviations: 5640782972.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,047 | INFO     | sum of deviations: -45251806778.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,047 | INFO     | mean x: 1753711257.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,047 | INFO     | mean y: 2543218.6920152092
[2025-07-28 18:16:57] 2025-07-28 16:16:24,047 | INFO     | -- intersect: 14071264412.202152
[2025-07-28 18:16:57] 2025-07-28 16:16:24,047 | INFO     | intersect: 14071264412.202152
[2025-07-28 18:16:57] 2025-07-28 16:16:24,048 | INFO     | chi2: 0.1909618563801532
[2025-07-28 18:16:57] 2025-07-28 16:16:24,048 | INFO     | current chi2=0.1909618563801532 (change=8.959493764790977 %)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,048 | INFO     | left removable region: 20
[2025-07-28 18:16:57] 2025-07-28 16:16:24,049 | INFO     | sum of square deviations: 4672638308.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,051 | INFO     | sum of deviations: -28213409449.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,051 | INFO     | mean x: 1753711379.0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,051 | INFO     | mean y: 2535612.4858299596
[2025-07-28 18:16:57] 2025-07-28 16:16:24,051 | INFO     | -- intersect: 10591452179.468145
[2025-07-28 18:16:57] 2025-07-28 16:16:24,051 | INFO     | intersect: 10591452179.468145
[2025-07-28 18:16:57] 2025-07-28 16:16:24,052 | INFO     | chi2: 0.1572461567335735
[2025-07-28 18:16:57] 2025-07-28 16:16:24,052 | INFO     | -- intersect: 10591452179.468145
[2025-07-28 18:16:57] 2025-07-28 16:16:24,052 | INFO     | current memory leak: -6.04 B/s (using 247 data points, chi2=0.16)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | ..............................
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | . Timing measurements:
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | . get job = 0 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | . initial setup = 2 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | . payload setup = 13 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | . stage-in = 0 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | . payload execution = 16661 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,053 | INFO     | . stage-out = 2 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,054 | INFO     | . log creation = 0 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,054 | INFO     | ..............................
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | 
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | job summary report
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | --------------------------------------------------
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | PanDA job id: 6747579313
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | task id: 45743349
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | errors: (none)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 18:16:57] 2025-07-28 16:16:24,172 | INFO     | pilot state: finished 
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | transexitcode: 0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | exeerrorcode: 0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | exeerrordiag: 
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | exitcode: 0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | exitmsg: OK
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | cpuconsumptiontime: 63840 s
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | nevents: 400
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | neventsw: 0
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | pid: 4903
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | pgrp: 4903
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | corecount: 8
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | event service: False
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | sizes: {0: 2397303, 1: 2397502, 8: 2397764, 12: 2397792, 16678: 2429041, 16679: 2429040, 16683: 2432658, 16685: 2432714, 16761: 2432908}
[2025-07-28 18:16:57] 2025-07-28 16:16:24,173 | INFO     | --------------------------------------------------
[2025-07-28 18:16:57] 2025-07-28 16:16:24,174 | INFO     | 
[2025-07-28 18:16:57] 2025-07-28 16:16:24,174 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-07-28 18:16:57] 2025-07-28 16:16:24,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | job 6747579313 has completed (purged errors)
[2025-07-28 18:16:57] 2025-07-28 16:16:24,253 | INFO     | overall cleanup function is called
[2025-07-28 18:16:57] 2025-07-28 16:16:25,263 | INFO     | --- collectZombieJob: --- 10, [4903]
[2025-07-28 18:16:57] 2025-07-28 16:16:25,263 | INFO     | zombie collector waiting for pid 4903
[2025-07-28 18:16:57] 2025-07-28 16:16:25,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 18:16:57] 2025-07-28 16:16:25,263 | INFO     | collected zombie processes
[2025-07-28 18:16:57] 2025-07-28 16:16:25,263 | INFO     | will attempt to kill all subprocesses of pid=4903
[2025-07-28 18:16:57] 2025-07-28 16:16:25,357 | INFO     | process IDs to be killed: [4903] (in reverse order)
[2025-07-28 18:16:57] 2025-07-28 16:16:25,569 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 18:16:57] 2025-07-28 16:16:25,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 18:16:57] 2025-07-28 16:16:25,574 | INFO     | did not find any defunct processes belonging to 4903
[2025-07-28 18:16:57] 2025-07-28 16:16:25,577 | INFO     | did not find any defunct processes belonging to 4903
[2025-07-28 18:16:57] 2025-07-28 16:16:25,577 | INFO     | ready for new job
[2025-07-28 18:16:57] 2025-07-28 16:16:25,578 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 18:16:57] 2025-07-28 16:16:25,580 | INFO     | ***************************************
[2025-07-28 18:16:57] 2025-07-28 16:16:25,580 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 18:16:57] 2025-07-28 16:16:25,580 | INFO     | ***************************************
[2025-07-28 18:16:57] 2025-07-28 16:16:25,580 | INFO     | 
[2025-07-28 18:16:57] 2025-07-28 16:16:25,581 | INFO     | pilot is running in a VM
[2025-07-28 18:16:57] 2025-07-28 16:16:25,581 | INFO     | architecture information:
[2025-07-28 18:16:57] 2025-07-28 16:16:25,581 | INFO     | executing command: cat /etc/os-release
[2025-07-28 18:16:57] 2025-07-28 16:16:25,598 | INFO     | cat /etc/os-release:
[2025-07-28 18:16:57] NAME="CentOS Linux"
[2025-07-28 18:16:57] VERSION="7 (Core)"
[2025-07-28 18:16:57] ID="centos"
[2025-07-28 18:16:57] ID_LIKE="rhel fedora"
[2025-07-28 18:16:57] VERSION_ID="7"
[2025-07-28 18:16:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 18:16:57] ANSI_COLOR="0;31"
[2025-07-28 18:16:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 18:16:57] HOME_URL="https://www.centos.org/"
[2025-07-28 18:16:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 18:16:57] 
[2025-07-28 18:16:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 18:16:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 18:16:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 18:16:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 18:16:57] 
[2025-07-28 18:16:57] 2025-07-28 16:16:25,598 | INFO     | ***************************************
[2025-07-28 18:16:57] 2025-07-28 16:16:26,103 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-07-28 18:16:57] 2025-07-28 16:16:26,289 | INFO     | sufficient remaining disk space (497342742528 B)
[2025-07-28 18:16:57] 2025-07-28 16:16:26,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 18:16:57] 2025-07-28 16:16:26,290 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 18:16:57] 2025-07-28 16:16:26,290 | INFO     | update_server=False
[2025-07-28 18:16:57] 2025-07-28 16:16:26,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 18:16:57] 2025-07-28 16:16:26,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 18:16:57] 2025-07-28 16:16:26,377 | INFO     | aborting loop
[2025-07-28 18:16:57] 2025-07-28 16:16:26,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 18:16:57] 2025-07-28 16:16:26,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 18:16:57] 2025-07-28 16:16:26,929 | INFO     | all data control threads have been joined
[2025-07-28 18:16:57] 2025-07-28 16:16:27,038 | INFO     | all payload control threads have been joined
[2025-07-28 18:16:57] 2025-07-28 16:16:27,209 | INFO     | all job control threads have been joined
[2025-07-28 18:16:57] 2025-07-28 16:16:27,296 | INFO     | [job] retrieve thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:27,383 | INFO     | [job] job monitor thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:27,431 | INFO     | [data] copytool_in thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:27,935 | INFO     | [data] control thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,044 | INFO     | [payload] control thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,177 | INFO     | [payload] failed_post thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,215 | INFO     | [job] control thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,319 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,328 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,421 | INFO     | [job] validate thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,505 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,696 | INFO     | [payload] validate_post thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:28,915 | INFO     | [data] copytool_out thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:29,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 18:16:57] 2025-07-28 16:16:30,195 | INFO     | [job] queue monitor thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:30,594 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 18:16:57] 2025-07-28 16:16:31,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543652255552)>', '<ExcThread(monitor, started 140542889400064)>']
[2025-07-28 18:16:57] 2025-07-28 16:16:36,289 | INFO     | all workflow threads have been joined
[2025-07-28 18:16:57] 2025-07-28 16:16:36,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 18:16:57] 2025-07-28 16:16:36,289 | INFO     | traces error code: 0
[2025-07-28 18:16:57] 2025-07-28 16:16:36,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 18:16:57] 2025-07-28 16:16:56,791 | INFO     | PID=30712 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 18:16:57] 2025-07-28 16:16:56,792 | INFO     | .. there are 9 such processes running
[2025-07-28 18:16:57] 2025-07-28 16:16:56,793 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 18:16:57] 2025-07-28 16:16:56,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 18:16:57] 2025-07-28 16:16:56,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 18:16:57] 2025-07-28 16:16:56,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 18:16:57] 2025-07-28 16:16:56,793 | INFO     | [monitor] control thread has ended
[2025-07-28 18:16:57] 2025-07-28 16:16:56,977 [wrapper] ==== pilot stdout END ====
[2025-07-28 18:16:57] 2025-07-28 16:16:56,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 18:16:57] 2025-07-28 16:16:56,986 [wrapper] pilotpid: 30712
[2025-07-28 18:16:57] 2025-07-28 16:16:56,989 [wrapper] Pilot exit status: 0
[2025-07-28 18:16:57] 2025-07-28 16:16:57,008 [wrapper] pandaids: 6747579313
[2025-07-28 18:16:57] 2025-07-28 16:16:57,050 [wrapper] cleanup supervisor_pilot  7413 30713
[2025-07-28 18:16:57] 2025-07-28 16:16:57,100 [wrapper] Test setup, not cleaning
[2025-07-28 18:16:57] 2025-07-28 16:16:57,103 [wrapper] apfmon messages muted
[2025-07-28 18:16:57] 2025-07-28 16:16:57,106 [wrapper] ==== wrapper stdout END ====
[2025-07-28 18:16:57] 2025-07-28 16:16:57,110 [wrapper] ==== wrapper stderr END ====
[2025-07-28 18:16:57]  *** Error codes and diagnostics ***
[2025-07-28 18:16:57]     "exeErrorCode": 0,
[2025-07-28 18:16:57]     "exeErrorDiag": "",
[2025-07-28 18:16:57]     "pilotErrorCode": 0,
[2025-07-28 18:16:57]     "pilotErrorDiag": "",
[2025-07-28 18:16:57]  *** Listing of results directory ***
[2025-07-28 18:16:57] total 355312
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc    530466 Jul 27 20:08 pilot3.tar.gz
[2025-07-28 18:16:57] -rwx------. 1 boinc boinc     36292 Jul 27 20:11 runpilot2-wrapper.sh
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc      5112 Jul 27 20:11 queuedata.json
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc       100 Jul 28 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 18:16:57] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 13:36 run_atlas
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc       105 Jul 28 13:36 job.xml
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc      6391 Jul 28 13:36 init_data.xml
[2025-07-28 18:16:57] -rw-r--r--. 2 boinc boinc 149766063 Jul 28 13:36 EVNT.45743347._002929.pool.root.1
[2025-07-28 18:16:57] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:36 start_atlas.sh
[2025-07-28 18:16:57] drwxrwx--x. 2 boinc boinc        68 Jul 28 13:36 shared
[2025-07-28 18:16:57] -rw-r--r--. 2 boinc boinc    542892 Jul 28 13:36 input.tar.gz
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc         0 Jul 28 13:36 boinc_lockfile
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc      2562 Jul 28 13:36 pandaJob.out
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc    978452 Jul 28 13:36 agis_schedconf.cvmfs.json
[2025-07-28 18:16:57] drwx------. 4 boinc boinc      4096 Jul 28 13:36 pilot3
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc 206541971 Jul 28 18:14 HITS.45743349._053499.pool.root.1
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc       531 Jul 28 18:14 boinc_task_state.xml
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc      1017 Jul 28 18:14 memory_monitor_summary.json
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc   1589827 Jul 28 18:15 agis_ddmendpoints.agis.ALL.json
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc    397963 Jul 28 18:15 log.45743349._053499.job.log.tgz.1
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc      7777 Jul 28 18:16 heartbeat.json
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc      8192 Jul 28 18:16 boinc_mmap_file
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc        28 Jul 28 18:16 wrapper_checkpoint.txt
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc        95 Jul 28 18:16 pilot_heartbeat.json
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc       820 Jul 28 18:16 pilotlog.txt
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc   1439458 Jul 28 18:16 log.45743349._053499.job.log.1
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc       357 Jul 28 18:16 output.list
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc       620 Jul 28 18:16 runtime_log
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc   1853440 Jul 28 18:16 result.tar.gz
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc       657 Jul 28 18:16 yBkNDmT1K07n9Rq4apOajLDm4fhM0noT9bVof3QYDmwu2KDmDOoo3n.diag
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc      8674 Jul 28 18:16 runtime_log.err
[2025-07-28 18:16:57] -rw-r--r--. 1 boinc boinc     20832 Jul 28 18:16 stderr.txt
[2025-07-28 18:16:57] HITS file was successfully produced:
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc 206541971 Jul 28 18:14 shared/HITS.pool.root.1
[2025-07-28 18:16:57]  *** Contents of shared directory: ***
[2025-07-28 18:16:57] total 350320
[2025-07-28 18:16:57] -rw-r--r--. 2 boinc boinc 149766063 Jul 28 13:36 ATLAS.root_0
[2025-07-28 18:16:57] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:36 start_atlas.sh
[2025-07-28 18:16:57] -rw-r--r--. 2 boinc boinc    542892 Jul 28 13:36 input.tar.gz
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc 206541971 Jul 28 18:14 HITS.pool.root.1
[2025-07-28 18:16:57] -rw-------. 1 boinc boinc   1853440 Jul 28 18:16 result.tar.gz
18:16:58 (26660): run_atlas exited; CPU time 64044.792302
18:16:58 (26660): called boinc_finish(0)

</stderr_txt>
]]>


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