Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:42:53 (2230676): wrapper (7.7.26015): starting
20:42:53 (2230676): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:42:53] Arguments: --nthreads 12
[2025-07-27 20:42:53] Threads: 12
[2025-07-27 20:42:53] Checking for CVMFS
[2025-07-27 20:42:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:42:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:42:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:42:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:42:53] 2.13.1.0 407057 14183 288876 148829 1 215 40669898 40960000 7525 16776704 0 25561218 99.679 40940781 35347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:42:53] CVMFS is ok
[2025-07-27 20:42:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:42:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:42:53] Further information can be found at the LHC@home message board.
[2025-07-27 20:42:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:42:53] Checking for apptainer binary...
[2025-07-27 20:42:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:42:53] Running /usr/bin/apptainer --version
[2025-07-27 20:42:53] apptainer version 1.4.1-1.el9
[2025-07-27 20:42:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:42:54] c-210-31-3.aglt2.org
[2025-07-27 20:42:54] apptainer works
[2025-07-27 20:42:54] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:42:54] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:42:54] Starting ATLAS job with PandaID=6747579293
[2025-07-27 20:42:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:58:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:58:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/53/log.45743349._053479.job.log.tgz.1
[2025-07-27 21:58:22]  workdir=None
[2025-07-27 21:58:22] ]
[2025-07-27 21:58:22] 2025-07-28 01:57:43,368 | INFO     | transferring file log.45743349._053479.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747579293/log.45743349._053479.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 21:58:22] 2025-07-28 01:57:43,368 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747579293/log.45743349._053479.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053479.job
[2025-07-27 21:58:22] 2025-07-28 01:57:43,390 | INFO     | adding to output.list: log.45743349._053479.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/53/log.45743349._053479.job.log.tg
[2025-07-27 21:58:22] 2025-07-28 01:57:43,391 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:58:22] 2025-07-28 01:57:43,391 | INFO     | summary of transferred files:
[2025-07-27 21:58:22] 2025-07-28 01:57:43,391 | INFO     |  -- lfn=log.45743349._053479.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:58:22] 2025-07-28 01:57:43,392 | INFO     | stage-out finished correctly
[2025-07-27 21:58:22] 2025-07-28 01:57:43,488 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:58:22] 2025-07-28 01:57:45,457 | INFO     | job 6747579293 has state=finished
[2025-07-27 21:58:22] 2025-07-28 01:57:45,457 | INFO     | preparing for final server update for job 6747579293 in state='finished'
[2025-07-27 21:58:22] 2025-07-28 01:57:45,458 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:58:22] 2025-07-28 01:57:45,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:58:22] 2025-07-28 01:57:45,458 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:58:22] 2025-07-28 01:57:45,458 | INFO     | job 6747579293 has finished - writing final server update
[2025-07-27 21:58:22] 2025-07-28 01:57:45,458 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:58:22] 2025-07-28 01:57:45,460 | INFO     | executing command: lscpu
[2025-07-27 21:58:22] 2025-07-28 01:57:45,508 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:58:22] 2025-07-28 01:57:46,439 | WARNING  | process 2241655 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 21:58:22] 2025-07-28 01:57:46,439 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579293/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:58:22] 2025-07-28 01:57:46,441 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579293/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:58:22] 2025-07-28 01:57:46,443 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4196131 B
[2025-07-27 21:58:22] 2025-07-28 01:57:46,443 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15305 B
[2025-07-27 21:58:22] 2025-07-28 01:57:46,443 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 21:58:22] 2025-07-28 01:57:50,993 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 21:58:22] 2025-07-28 01:57:51,003 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2576.772053571429
[2025-07-27 21:58:22] 2025-07-28 01:57:51,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747579293/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,016 | INFO     | sufficient remaining disk space (75522637824 B)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,017 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,017 | INFO     | extracted standard info from prmon json
[2025-07-27 21:58:22] 2025-07-28 01:57:51,018 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:58:22] 2025-07-28 01:57:51,018 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:58:22] 2025-07-28 01:57:51,019 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:58:22] 2025-07-28 01:57:51,019 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:58:22] 2025-07-28 01:57:51,021 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:58:22] 2025-07-28 01:57:51,022 | INFO     | sum of square deviations: 89127252.5
[2025-07-27 21:58:22] 2025-07-28 01:57:51,022 | INFO     | sum of deviations: -12568532781.000002
[2025-07-27 21:58:22] 2025-07-28 01:57:51,022 | INFO     | mean x: 1753665704.5
[2025-07-27 21:58:22] 2025-07-28 01:57:51,022 | INFO     | mean y: 2936219.1515151514
[2025-07-27 21:58:22] 2025-07-28 01:57:51,022 | INFO     | -- intersect: 247301088868.0701
[2025-07-27 21:58:22] 2025-07-28 01:57:51,022 | INFO     | intersect: 247301088868.0701
[2025-07-27 21:58:22] 2025-07-28 01:57:51,022 | INFO     | chi2: 0.08663490544348361
[2025-07-27 21:58:22] 2025-07-28 01:57:51,023 | INFO     | -- intersect: 247301088868.0701
[2025-07-27 21:58:22] 2025-07-28 01:57:51,023 | INFO     | current memory leak: -141.02 B/s (using 66 data points, chi2=0.09)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,023 | INFO     | could have reported an average CPU frequency of 2644 MHz (6 samples)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | ..............................
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . Timing measurements:
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . get job = 0 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . initial setup = 2 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . payload setup = 8 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . stage-in = 0 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . payload execution = 4447 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . stage-out = 0 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | . log creation = 0 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,024 | INFO     | ..............................
[2025-07-27 21:58:22] 2025-07-28 01:57:51,131 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6747579293: 4492496 B (within 2537553920 B limit)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,140 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6747579293/HITS.45743349._053479.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,140 | INFO     | total size of present files: 0 B (workdir size: 4492496 B)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,141 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6747579293/HITS.45743349._053479.pool.root.1 since it does not exist
[2025-07-27 21:58:22] 2025-07-28 01:57:51,154 | INFO     | 
[2025-07-27 21:58:22] 2025-07-28 01:57:51,155 | INFO     | job summary report
[2025-07-27 21:58:22] 2025-07-28 01:57:51,155 | INFO     | --------------------------------------------------
[2025-07-27 21:58:22] 2025-07-28 01:57:51,156 | INFO     | PanDA job id: 6747579293
[2025-07-27 21:58:22] 2025-07-28 01:57:51,156 | INFO     | task id: 45743349
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | errors: (none)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | pilot state: finished 
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | transexitcode: 0
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | exeerrorcode: 0
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | exeerrordiag: 
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | exitcode: 0
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | exitmsg: OK
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | cpuconsumptiontime: 49371 s
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | nevents: 400
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | neventsw: 0
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | pid: 2241655
[2025-07-27 21:58:22] 2025-07-28 01:57:51,157 | INFO     | pgrp: 2241655
[2025-07-27 21:58:22] 2025-07-28 01:57:51,158 | INFO     | corecount: 12
[2025-07-27 21:58:22] 2025-07-28 01:57:51,158 | INFO     | event service: False
[2025-07-27 21:58:22] 2025-07-28 01:57:51,158 | INFO     | sizes: {0: 2397304, 1: 2397503, 5: 2397765, 11: 2397821, 4459: 2423869, 4460: 2432867, 4461: 2433051, 4468: 2433245}
[2025-07-27 21:58:22] 2025-07-28 01:57:51,158 | INFO     | --------------------------------------------------
[2025-07-27 21:58:22] 2025-07-28 01:57:51,158 | INFO     | 
[2025-07-27 21:58:22] 2025-07-28 01:57:51,158 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 21:58:22] 2025-07-28 01:57:51,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:58:22] 2025-07-28 01:57:51,187 | INFO     | job 6747579293 has completed (purged errors)
[2025-07-27 21:58:22] 2025-07-28 01:57:51,187 | INFO     | overall cleanup function is called
[2025-07-27 21:58:22] 2025-07-28 01:57:51,427 | INFO     | number of running child processes to parent process 2241655: 1
[2025-07-27 21:58:22] 2025-07-28 01:57:51,427 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:58:22] 2025-07-28 01:57:51,427 | INFO     | aborting job monitoring since job object (job id=6747579293) has expired
[2025-07-27 21:58:22] 2025-07-28 01:57:52,197 | INFO     | --- collectZombieJob: --- 10, [2241655]
[2025-07-27 21:58:22] 2025-07-28 01:57:52,197 | INFO     | zombie collector waiting for pid 2241655
[2025-07-27 21:58:22] 2025-07-28 01:57:52,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:58:22] 2025-07-28 01:57:52,197 | INFO     | collected zombie processes
[2025-07-27 21:58:22] 2025-07-28 01:57:52,197 | INFO     | will attempt to kill all subprocesses of pid=2241655
[2025-07-27 21:58:22] 2025-07-28 01:57:52,428 | INFO     | process IDs to be killed: [2241655] (in reverse order)
[2025-07-27 21:58:22] 2025-07-28 01:57:52,521 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:58:22] 2025-07-28 01:57:52,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:58:22] 2025-07-28 01:57:52,534 | INFO     | did not find any defunct processes belonging to 2241655
[2025-07-27 21:58:22] 2025-07-28 01:57:52,547 | INFO     | did not find any defunct processes belonging to 2241655
[2025-07-27 21:58:22] 2025-07-28 01:57:52,548 | INFO     | ready for new job
[2025-07-27 21:58:22] 2025-07-28 01:57:52,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:58:22] 2025-07-28 01:57:52,550 | INFO     | ***************************************
[2025-07-27 21:58:22] 2025-07-28 01:57:52,550 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:58:22] 2025-07-28 01:57:52,550 | INFO     | ***************************************
[2025-07-27 21:58:22] 2025-07-28 01:57:52,550 | INFO     | 
[2025-07-27 21:58:22] 2025-07-28 01:57:52,555 | INFO     | architecture information:
[2025-07-27 21:58:22] 2025-07-28 01:57:52,555 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:58:22] 2025-07-28 01:57:52,575 | INFO     | cat /etc/os-release:
[2025-07-27 21:58:22] NAME="CentOS Linux"
[2025-07-27 21:58:22] VERSION="7 (Core)"
[2025-07-27 21:58:22] ID="centos"
[2025-07-27 21:58:22] ID_LIKE="rhel fedora"
[2025-07-27 21:58:22] VERSION_ID="7"
[2025-07-27 21:58:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:58:22] ANSI_COLOR="0;31"
[2025-07-27 21:58:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:58:22] HOME_URL="https://www.centos.org/"
[2025-07-27 21:58:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:58:22] 
[2025-07-27 21:58:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:58:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:58:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:58:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:58:22] 
[2025-07-27 21:58:22] 2025-07-28 01:57:52,576 | INFO     | ***************************************
[2025-07-27 21:58:22] 2025-07-28 01:57:53,078 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 21:58:22] 2025-07-28 01:57:53,096 | INFO     | sufficient remaining disk space (75526832128 B)
[2025-07-27 21:58:22] 2025-07-28 01:57:53,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:58:22] 2025-07-28 01:57:53,096 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:58:22] 2025-07-28 01:57:53,096 | INFO     | update_server=False
[2025-07-27 21:58:22] 2025-07-28 01:57:53,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:58:22] 2025-07-28 01:57:53,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:58:22] 2025-07-28 01:57:53,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:58:22] 2025-07-28 01:57:53,097 | INFO     | aborting loop
[2025-07-27 21:58:22] 2025-07-28 01:57:53,310 | INFO     | all job control threads have been joined
[2025-07-27 21:58:22] 2025-07-28 01:57:53,552 | INFO     | all data control threads have been joined
[2025-07-27 21:58:22] 2025-07-28 01:57:54,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:58:22] 2025-07-28 01:57:54,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:58:22] 2025-07-28 01:57:54,101 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,102 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,103 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,199 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,230 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,315 | INFO     | [job] control thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,398 | INFO     | all payload control threads have been joined
[2025-07-27 21:58:22] 2025-07-28 01:57:54,500 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,558 | INFO     | [data] control thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:54,775 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:55,098 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:55,164 | INFO     | [job] validate thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:55,387 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:55,403 | INFO     | [payload] control thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:56,011 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:57:58,090 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:58:03,308 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-07-27 21:58:22] 2025-07-28 01:58:03,981 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:58:22] 2025-07-28 01:58:04,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:58:22] 2025-07-28 01:58:06,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671364646720)>', '<ExcThread(monitor, started 139671019431680)>']
[2025-07-27 21:58:22] 2025-07-28 01:58:11,995 | INFO     | all workflow threads have been joined
[2025-07-27 21:58:22] 2025-07-28 01:58:11,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:58:22] 2025-07-28 01:58:11,995 | INFO     | traces error code: 0
[2025-07-27 21:58:22] 2025-07-28 01:58:11,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:58:22] 2025-07-28 01:58:22,611 | INFO     | PID=2235104 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:58:22] 2025-07-28 01:58:22,611 | INFO     | .. there are 11 such processes running
[2025-07-27 21:58:22] 2025-07-28 01:58:22,612 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:58:22] 2025-07-28 01:58:22,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:58:22] 2025-07-28 01:58:22,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:58:22] 2025-07-28 01:58:22,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:58:22] 2025-07-28 01:58:22,612 | INFO     | [monitor] control thread has ended
[2025-07-27 21:58:22] 2025-07-28 01:58:22,806 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:58:22] 2025-07-28 01:58:22,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:58:22] 2025-07-28 01:58:22,814 [wrapper] pilotpid: 2235104
[2025-07-27 21:58:22] 2025-07-28 01:58:22,819 [wrapper] Pilot exit status: 0
[2025-07-27 21:58:22] 2025-07-28 01:58:22,834 [wrapper] pandaids: 6747579293
[2025-07-27 21:58:22] 2025-07-28 01:58:22,894 [wrapper] cleanup supervisor_pilot 2432183 2235105
[2025-07-27 21:58:22] 2025-07-28 01:58:22,898 [wrapper] Test setup, not cleaning
[2025-07-27 21:58:22] 2025-07-28 01:58:22,901 [wrapper] apfmon messages muted
[2025-07-27 21:58:22] 2025-07-28 01:58:22,906 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:58:22] 2025-07-28 01:58:22,911 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:58:22]  *** Error codes and diagnostics ***
[2025-07-27 21:58:22]     "exeErrorCode": 0,
[2025-07-27 21:58:22]     "exeErrorDiag": "",
[2025-07-27 21:58:22]     "pilotErrorCode": 0,
[2025-07-27 21:58:22]     "pilotErrorDiag": "",
[2025-07-27 21:58:22]  *** Listing of results directory ***
[2025-07-27 21:58:23] total 350396
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 14:08 pilot3.tar.gz
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:10 queuedata.json
[2025-07-27 21:58:23] -rwx------. 1 boincer umatlas     36292 Jul 27 14:10 runpilot2-wrapper.sh
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:58:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:42 run_atlas
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:42 job.xml
[2025-07-27 21:58:23] -rw-r--r--. 2 boincer umatlas 144225872 Jul 27 20:42 EVNT.45743347._002927.pool.root.1
[2025-07-27 21:58:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:42 start_atlas.sh
[2025-07-27 21:58:23] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:42 shared
[2025-07-27 21:58:23] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 20:42 input.tar.gz
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:42 boinc_lockfile
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 20:42 pandaJob.out
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas    980125 Jul 27 20:43 agis_schedconf.cvmfs.json
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:58:23] drwx------. 4 boincer umatlas      4096 Jul 27 20:43 pilot3
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 21:55 init_data.xml
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas 209080381 Jul 27 21:57 HITS.45743349._053479.pool.root.1
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas       530 Jul 27 21:57 boinc_task_state.xml
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas        95 Jul 27 21:57 pilot_heartbeat.json
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas      1035 Jul 27 21:57 memory_monitor_summary.json
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas    361655 Jul 27 21:57 log.45743349._053479.job.log.tgz.1
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas      7827 Jul 27 21:57 heartbeat.json
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas        27 Jul 27 21:58 wrapper_checkpoint.txt
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 21:58 boinc_mmap_file
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas       823 Jul 27 21:58 pilotlog.txt
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas    450019 Jul 27 21:58 log.45743349._053479.job.log.1
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas       357 Jul 27 21:58 output.list
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas       620 Jul 27 21:58 runtime_log
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas    829440 Jul 27 21:58 result.tar.gz
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas      8672 Jul 27 21:58 runtime_log.err
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas       655 Jul 27 21:58 FUMNDmV0K07n9Rq4apOajLDm4fhM0noT9bVof3QYDmeu2KDmbhnzDm.diag
[2025-07-27 21:58:23] -rw-r--r--. 1 boincer umatlas     22571 Jul 27 21:58 stderr.txt
[2025-07-27 21:58:23] HITS file was successfully produced:
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas 209080381 Jul 27 21:57 shared/HITS.pool.root.1
[2025-07-27 21:58:23]  *** Contents of shared directory: ***
[2025-07-27 21:58:23] total 346396
[2025-07-27 21:58:23] -rw-r--r--. 2 boincer umatlas 144225872 Jul 27 20:42 ATLAS.root_0
[2025-07-27 21:58:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:42 start_atlas.sh
[2025-07-27 21:58:23] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 20:42 input.tar.gz
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas 209080381 Jul 27 21:57 HITS.pool.root.1
[2025-07-27 21:58:23] -rw-------. 1 boincer umatlas    829440 Jul 27 21:58 result.tar.gz
21:58:25 (2230676): run_atlas exited; CPU time 49451.964899
21:58:25 (2230676): called boinc_finish(0)

</stderr_txt>
]]>

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