Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:24:48 (1078766): wrapper (7.7.26015): starting
13:24:48 (1078766): wrapper: running run_atlas (--nthreads 3)
[2025-07-28 13:24:48] Arguments: --nthreads 3
[2025-07-28 13:24:48] Threads: 3
[2025-07-28 13:24:48] Checking for CVMFS
[2025-07-28 13:24:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 13:24:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 13:24:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 13:24:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 13:24:48] 2.9.2.0 3722602 5496 86448 148845 2 57 34534309 36864000 0 130560 0 4108005 99.990 192153 1913 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 13:24:48] CVMFS is ok
[2025-07-28 13:24:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 13:24:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 13:24:48] Further information can be found at the LHC@home message board.
[2025-07-28 13:24:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 13:24:48] Checking for apptainer binary...
[2025-07-28 13:24:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 13:24:48] Running /usr/bin/apptainer --version
[2025-07-28 13:24:48] apptainer version 1.4.1-1.1
[2025-07-28 13:24:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 13:24:48] legendA269a
[2025-07-28 13:24:48] apptainer works
[2025-07-28 13:24:48] Set ATHENA_PROC_NUMBER=3
[2025-07-28 13:24:48] Set ATHENA_CORE_NUMBER=3
[2025-07-28 13:24:48] Starting ATLAS job with PandaID=6747579355
[2025-07-28 13:24:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 14:57:54]  *** The last 200 lines of the pilot log: ***
[2025-07-28 14:57:54]  is_tar=False
[2025-07-28 14:57:54]  lfn=log.45743349._053541.job.log.tgz.1
[2025-07-28 14:57:54]  mtime=0
[2025-07-28 14:57:54]  protocol_id=None
[2025-07-28 14:57:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 14:57:54]  replicas=None
[2025-07-28 14:57:54]  scope=mc23_13p6TeV
[2025-07-28 14:57:54]  status=None
[2025-07-28 14:57:54]  status_code=0
[2025-07-28 14:57:54]  storage_token=
[2025-07-28 14:57:54]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6747579355/log.45743349._053541.job.log.tgz.1
[2025-07-28 14:57:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/11/log.45743349._053541.job.log.tgz.1
[2025-07-28 14:57:54]  workdir=None
[2025-07-28 14:57:54] ]
[2025-07-28 14:57:54] 2025-07-28 12:57:18,811 | INFO     | transferring file log.45743349._053541.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6747579355/log.45743349._053541.job.log.tgz.1 to /local/data/boinc/
[2025-07-28 14:57:54] 2025-07-28 12:57:18,811 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6747579355/log.45743349._053541.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0535
[2025-07-28 14:57:54] 2025-07-28 12:57:18,825 | INFO     | adding to output.list: log.45743349._053541.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/11/log.45743349._053541.job.log.tg
[2025-07-28 14:57:54] 2025-07-28 12:57:18,825 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 14:57:54] 2025-07-28 12:57:18,825 | INFO     | summary of transferred files:
[2025-07-28 14:57:54] 2025-07-28 12:57:18,825 | INFO     |  -- lfn=log.45743349._053541.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 14:57:54] 2025-07-28 12:57:18,825 | INFO     | stage-out finished correctly
[2025-07-28 14:57:54] 2025-07-28 12:57:19,138 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 14:57:54] 2025-07-28 12:57:19,438 | INFO     | job 6747579355 has state=finished
[2025-07-28 14:57:54] 2025-07-28 12:57:19,438 | INFO     | preparing for final server update for job 6747579355 in state='finished'
[2025-07-28 14:57:54] 2025-07-28 12:57:19,439 | INFO     | this job has now completed (state=finished)
[2025-07-28 14:57:54] 2025-07-28 12:57:19,439 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 14:57:54] 2025-07-28 12:57:19,439 | INFO     | log transfer has been attempted: DONE
[2025-07-28 14:57:54] 2025-07-28 12:57:19,439 | INFO     | job 6747579355 has finished - writing final server update
[2025-07-28 14:57:54] 2025-07-28 12:57:19,439 | INFO     | total number of processed events: 400 (read)
[2025-07-28 14:57:54] 2025-07-28 12:57:19,440 | INFO     | executing command: lscpu
[2025-07-28 14:57:54] 2025-07-28 12:57:19,455 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 14:57:54] 2025-07-28 12:57:21,306 | INFO     | 5548s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-28 14:57:54] 2025-07-28 12:57:21,524 | WARNING  | process 1088909 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 14:57:54] 2025-07-28 12:57:21,524 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747579355/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 14:57:54] 2025-07-28 12:57:21,559 | INFO     | number of running child processes to parent process 1088909: 1
[2025-07-28 14:57:54] 2025-07-28 12:57:21,559 | INFO     | maximum number of monitored processes: 6
[2025-07-28 14:57:54] 2025-07-28 12:57:21,796 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 14:57:54] 2025-07-28 12:57:21,797 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3576.1031666666663
[2025-07-28 14:57:54] 2025-07-28 12:57:21,798 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747579355/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 14:57:54] 2025-07-28 12:57:21,798 | INFO     | extracted standard info from prmon json
[2025-07-28 14:57:54] 2025-07-28 12:57:21,799 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 14:57:54] 2025-07-28 12:57:21,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 14:57:54] 2025-07-28 12:57:21,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 14:57:54] 2025-07-28 12:57:21,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 14:57:54] 2025-07-28 12:57:21,799 | INFO     | fitting pss+swap vs Time
[2025-07-28 14:57:54] 2025-07-28 12:57:21,799 | INFO     | sum of square deviations: 183761585.0
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | sum of deviations: 525517500.99999994
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | mean x: 1753704750.5
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | mean y: 2353299.095238095
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | -- intersect: -5012854520.180964
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | intersect: -5012854520.180964
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | chi2: 0.01539539005918893
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | -- intersect: -5012854520.180964
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | current memory leak: 2.86 B/s (using 84 data points, chi2=0.02)
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | could have reported an average CPU frequency of 3908 MHz (7 samples)
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | ..............................
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . Timing measurements:
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . get job = 0 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . initial setup = 1 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . payload setup = 3 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . stage-in = 0 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . payload execution = 5524 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . stage-out = 0 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | . log creation = 0 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,800 | INFO     | ..............................
[2025-07-28 14:57:54] 2025-07-28 12:57:21,831 | INFO     | 
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | job summary report
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | --------------------------------------------------
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | PanDA job id: 6747579355
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | task id: 45743349
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | errors: (none)
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | pilot state: finished 
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | transexitcode: 0
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | exeerrorcode: 0
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | exeerrordiag: 
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | exitcode: 0
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | exitmsg: OK
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | cpuconsumptiontime: 15987 s
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | nevents: 400
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | neventsw: 0
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | pid: 1088909
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | pgrp: 1088909
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | corecount: 3
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | event service: False
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 5531: 2433554, 5532: 2433554, 5534: 2433748}
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | --------------------------------------------------
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | 
[2025-07-28 14:57:54] 2025-07-28 12:57:21,832 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 14:57:54] 2025-07-28 12:57:21,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | job 6747579355 has completed (purged errors)
[2025-07-28 14:57:54] 2025-07-28 12:57:21,846 | INFO     | overall cleanup function is called
[2025-07-28 14:57:54] 2025-07-28 12:57:22,363 | INFO     | PID=1082404 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 14:57:54] 2025-07-28 12:57:22,853 | INFO     | --- collectZombieJob: --- 10, [1088909]
[2025-07-28 14:57:54] 2025-07-28 12:57:22,853 | INFO     | zombie collector waiting for pid 1088909
[2025-07-28 14:57:54] 2025-07-28 12:57:22,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 14:57:54] 2025-07-28 12:57:22,853 | INFO     | collected zombie processes
[2025-07-28 14:57:54] 2025-07-28 12:57:22,853 | INFO     | will attempt to kill all subprocesses of pid=1088909
[2025-07-28 14:57:54] 2025-07-28 12:57:22,892 | INFO     | process IDs to be killed: [1088909] (in reverse order)
[2025-07-28 14:57:54] 2025-07-28 12:57:22,916 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 14:57:54] 2025-07-28 12:57:22,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 14:57:54] 2025-07-28 12:57:22,917 | INFO     | did not find any defunct processes belonging to 1088909
[2025-07-28 14:57:54] 2025-07-28 12:57:22,918 | INFO     | did not find any defunct processes belonging to 1088909
[2025-07-28 14:57:54] 2025-07-28 12:57:22,918 | INFO     | ready for new job
[2025-07-28 14:57:54] 2025-07-28 12:57:22,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 14:57:54] 2025-07-28 12:57:22,919 | INFO     | ***************************************
[2025-07-28 14:57:54] 2025-07-28 12:57:22,919 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 14:57:54] 2025-07-28 12:57:22,919 | INFO     | ***************************************
[2025-07-28 14:57:54] 2025-07-28 12:57:22,919 | INFO     | 
[2025-07-28 14:57:54] 2025-07-28 12:57:22,919 | INFO     | architecture information:
[2025-07-28 14:57:54] 2025-07-28 12:57:22,919 | INFO     | executing command: cat /etc/os-release
[2025-07-28 14:57:54] 2025-07-28 12:57:22,928 | INFO     | cat /etc/os-release:
[2025-07-28 14:57:54] NAME="CentOS Linux"
[2025-07-28 14:57:54] VERSION="7 (Core)"
[2025-07-28 14:57:54] ID="centos"
[2025-07-28 14:57:54] ID_LIKE="rhel fedora"
[2025-07-28 14:57:54] VERSION_ID="7"
[2025-07-28 14:57:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 14:57:54] ANSI_COLOR="0;31"
[2025-07-28 14:57:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 14:57:54] HOME_URL="https://www.centos.org/"
[2025-07-28 14:57:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 14:57:54] 
[2025-07-28 14:57:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 14:57:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 14:57:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 14:57:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 14:57:54] 
[2025-07-28 14:57:54] 2025-07-28 12:57:22,928 | INFO     | ***************************************
[2025-07-28 14:57:54] 2025-07-28 12:57:23,432 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 14:57:54] 2025-07-28 12:57:23,444 | INFO     | sufficient remaining disk space (367086534656 B)
[2025-07-28 14:57:54] 2025-07-28 12:57:23,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 14:57:54] 2025-07-28 12:57:23,445 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 14:57:54] 2025-07-28 12:57:23,445 | INFO     | update_server=False
[2025-07-28 14:57:54] 2025-07-28 12:57:23,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 14:57:54] 2025-07-28 12:57:23,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 14:57:54] 2025-07-28 12:57:23,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 14:57:54] 2025-07-28 12:57:23,445 | INFO     | aborting loop
[2025-07-28 14:57:54] 2025-07-28 12:57:23,467 | INFO     | all data control threads have been joined
[2025-07-28 14:57:54] 2025-07-28 12:57:23,585 | INFO     | job.realtimelogging is not enabled
[2025-07-28 14:57:54] 2025-07-28 12:57:23,976 | INFO     | all payload control threads have been joined
[2025-07-28 14:57:54] 2025-07-28 12:57:24,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 14:57:54] 2025-07-28 12:57:24,451 | INFO     | [job] job monitor thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:24,451 | INFO     | [job] retrieve thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:24,451 | INFO     | [job] queue monitor thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:24,472 | INFO     | [data] control thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:24,489 | INFO     | all job control threads have been joined
[2025-07-28 14:57:54] 2025-07-28 12:57:24,553 | INFO     | [payload] failed_post thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:24,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:24,982 | INFO     | [payload] control thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:25,041 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:25,177 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 14:57:54] 2025-07-28 12:57:25,364 | INFO     | [data] copytool_in thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:25,467 | INFO     | [payload] validate_post thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:25,495 | INFO     | [job] control thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:25,772 | INFO     | [job] validate thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:25,843 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:25,889 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:26,371 | INFO     | [data] copytool_out thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:29,184 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 14:57:54] 2025-07-28 12:57:29,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128996009792)>', '<ExcThread(monitor, started 140128064366336)>']
[2025-07-28 14:57:54] 2025-07-28 12:57:34,827 | INFO     | all workflow threads have been joined
[2025-07-28 14:57:54] 2025-07-28 12:57:34,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 14:57:54] 2025-07-28 12:57:34,827 | INFO     | traces error code: 0
[2025-07-28 14:57:54] 2025-07-28 12:57:34,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 14:57:54] 2025-07-28 12:57:54,493 | INFO     | PID=1082404 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 14:57:54] 2025-07-28 12:57:54,494 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 14:57:54] 2025-07-28 12:57:54,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 14:57:54] 2025-07-28 12:57:54,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 14:57:54] 2025-07-28 12:57:54,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 14:57:54] 2025-07-28 12:57:54,494 | INFO     | [monitor] control thread has ended
[2025-07-28 14:57:54] 2025-07-28 12:57:54,540 [wrapper] ==== pilot stdout END ====
[2025-07-28 14:57:54] 2025-07-28 12:57:54,542 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 14:57:54] 2025-07-28 12:57:54,544 [wrapper] pilotpid: 1082404
[2025-07-28 14:57:54] 2025-07-28 12:57:54,547 [wrapper] Pilot exit status: 0
[2025-07-28 14:57:54] 2025-07-28 12:57:54,554 [wrapper] pandaids: 6747579355
[2025-07-28 14:57:54] 2025-07-28 12:57:54,570 [wrapper] cleanup supervisor_pilot 1100915 1082405
[2025-07-28 14:57:54] 2025-07-28 12:57:54,573 [wrapper] Test setup, not cleaning
[2025-07-28 14:57:54] 2025-07-28 12:57:54,576 [wrapper] apfmon messages muted
[2025-07-28 14:57:54] 2025-07-28 12:57:54,578 [wrapper] ==== wrapper stdout END ====
[2025-07-28 14:57:54] 2025-07-28 12:57:54,580 [wrapper] ==== wrapper stderr END ====
[2025-07-28 14:57:54]  *** Error codes and diagnostics ***
[2025-07-28 14:57:54]     "exeErrorCode": 0,
[2025-07-28 14:57:54]     "exeErrorDiag": "",
[2025-07-28 14:57:54]     "pilotErrorCode": 0,
[2025-07-28 14:57:54]     "pilotErrorDiag": "",
[2025-07-28 14:57:54]  *** Listing of results directory ***
[2025-07-28 14:57:54] total 351408
[2025-07-28 14:57:54] -rwx------ 1 boinc boinc     36292 Jul 27 20:08 runpilot2-wrapper.sh
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc      5112 Jul 27 20:08 queuedata.json
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc    530466 Jul 27 20:08 pilot3.tar.gz
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc       100 Jul 28 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 14:57:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 13:24 run_atlas
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc       105 Jul 28 13:24 job.xml
[2025-07-28 14:57:54] -rw-r--r-- 2 boinc boinc 144725405 Jul 28 13:24 EVNT.45743347._002931.pool.root.1
[2025-07-28 14:57:54] drwxrwx--x 2 boinc boinc      4096 Jul 28 13:24 shared
[2025-07-28 14:57:54] -rw-r--r-- 2 boinc boinc    542889 Jul 28 13:24 input.tar.gz
[2025-07-28 14:57:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 13:24 start_atlas.sh
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc         0 Jul 28 13:24 boinc_setup_complete
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc      6528 Jul 28 13:24 init_data.xml
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc         0 Jul 28 13:24 boinc_lockfile
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc      2563 Jul 28 13:24 pandaJob.out
[2025-07-28 14:57:54] -rw------- 1 boinc boinc    978460 Jul 28 13:24 agis_schedconf.cvmfs.json
[2025-07-28 14:57:54] -rw------- 1 boinc boinc   1593052 Jul 28 13:24 agis_ddmendpoints.agis.ALL.json
[2025-07-28 14:57:54] drwx------ 4 boinc boinc      4096 Jul 28 13:24 pilot3
[2025-07-28 14:57:54] -rw------- 1 boinc boinc 209686136 Jul 28 14:56 HITS.45743349._053541.pool.root.1
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc       529 Jul 28 14:57 boinc_task_state.xml
[2025-07-28 14:57:54] -rw------- 1 boinc boinc      1028 Jul 28 14:57 memory_monitor_summary.json
[2025-07-28 14:57:54] -rw------- 1 boinc boinc    239645 Jul 28 14:57 log.45743349._053541.job.log.tgz.1
[2025-07-28 14:57:54] -rw------- 1 boinc boinc        95 Jul 28 14:57 pilot_heartbeat.json
[2025-07-28 14:57:54] -rw------- 1 boinc boinc      7754 Jul 28 14:57 heartbeat.json
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc        27 Jul 28 14:57 wrapper_checkpoint.txt
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc      8192 Jul 28 14:57 boinc_mmap_file
[2025-07-28 14:57:54] -rw------- 1 boinc boinc       747 Jul 28 14:57 pilotlog.txt
[2025-07-28 14:57:54] -rw------- 1 boinc boinc    536785 Jul 28 14:57 log.45743349._053541.job.log.1
[2025-07-28 14:57:54] -rw------- 1 boinc boinc       357 Jul 28 14:57 output.list
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc       620 Jul 28 14:57 runtime_log
[2025-07-28 14:57:54] -rw------- 1 boinc boinc    798720 Jul 28 14:57 result.tar.gz
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc      8759 Jul 28 14:57 runtime_log.err
[2025-07-28 14:57:54] -rw------- 1 boinc boinc       663 Jul 28 14:57 3qWMDmtyK07n9Rq4apOajLDm4fhM0noT9bVof3QYDm1t2KDmalNJWo.diag
[2025-07-28 14:57:54] -rw-r--r-- 1 boinc boinc     21677 Jul 28 14:57 stderr.txt
[2025-07-28 14:57:54] HITS file was successfully produced:
[2025-07-28 14:57:54] -rw------- 1 boinc boinc 209686136 Jul 28 14:56 shared/HITS.pool.root.1
[2025-07-28 14:57:54]  *** Contents of shared directory: ***
[2025-07-28 14:57:54] total 347444
[2025-07-28 14:57:54] -rw-r--r-- 2 boinc boinc 144725405 Jul 28 13:24 ATLAS.root_0
[2025-07-28 14:57:54] -rw-r--r-- 2 boinc boinc    542889 Jul 28 13:24 input.tar.gz
[2025-07-28 14:57:54] -rw-r--r-- 2 boinc boinc     15095 Jul 28 13:24 start_atlas.sh
[2025-07-28 14:57:54] -rw------- 1 boinc boinc 209686136 Jul 28 14:56 HITS.pool.root.1
[2025-07-28 14:57:54] -rw------- 1 boinc boinc    798720 Jul 28 14:57 result.tar.gz
14:57:56 (1078766): run_atlas exited; CPU time 16002.560460
14:57:56 (1078766): called boinc_finish(0)

</stderr_txt>
]]>

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