Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:26:34 (29064): wrapper (7.7.26015): starting
19:26:34 (29064): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 19:26:34] Arguments: --nthreads 8
[2025-07-27 19:26:34] Threads: 8
[2025-07-27 19:26:34] Checking for CVMFS
[2025-07-27 19:26:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:26:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:26:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:26:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:26:35] 2.11.2.0 1598 105981 117288 148828 2 57 20218897 20275201 917 130560 0 75596252 99.986 8209232 9302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:26:35] CVMFS is ok
[2025-07-27 19:26:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:26:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:26:35] Further information can be found at the LHC@home message board.
[2025-07-27 19:26:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:26:35] Checking for apptainer binary...
[2025-07-27 19:26:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:26:35] Running /usr/bin/apptainer --version
[2025-07-27 19:26:35] apptainer version 1.3.2-1.el7
[2025-07-27 19:26:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:26:36] c-205-36.aglt2.org
[2025-07-27 19:26:36] apptainer works
[2025-07-27 19:26:36] Set ATHENA_PROC_NUMBER=8
[2025-07-27 19:26:36] Set ATHENA_CORE_NUMBER=8
[2025-07-27 19:26:36] Starting ATLAS job with PandaID=6747524954
[2025-07-27 19:26:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:43:34]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:43:34]  mtime=0
[2025-07-27 20:43:34]  protocol_id=None
[2025-07-27 20:43:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:43:34]  replicas=None
[2025-07-27 20:43:34]  scope=mc23_13p6TeV
[2025-07-27 20:43:34]  status=None
[2025-07-27 20:43:34]  status_code=0
[2025-07-27 20:43:34]  storage_token=
[2025-07-27 20:43:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747524954/log.45743349._051867.job.log.tgz.1
[2025-07-27 20:43:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/3d/log.45743349._051867.job.log.tgz.1
[2025-07-27 20:43:34]  workdir=None
[2025-07-27 20:43:34] ]
[2025-07-27 20:43:34] 2025-07-28 00:42:53,847 | INFO     | transferring file log.45743349._051867.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747524954/log.45743349._051867.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:43:34] 2025-07-28 00:42:53,847 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747524954/log.45743349._051867.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._051867.job
[2025-07-27 20:43:34] 2025-07-28 00:42:53,866 | INFO     | adding to output.list: log.45743349._051867.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/3d/log.45743349._051867.job.log.tg
[2025-07-27 20:43:34] 2025-07-28 00:42:53,867 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:43:34] 2025-07-28 00:42:53,867 | INFO     | summary of transferred files:
[2025-07-27 20:43:34] 2025-07-28 00:42:53,867 | INFO     |  -- lfn=log.45743349._051867.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:43:34] 2025-07-28 00:42:53,867 | INFO     | stage-out finished correctly
[2025-07-27 20:43:34] 2025-07-28 00:42:54,335 | INFO     | PID=32690 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:43:34] 2025-07-28 00:42:54,335 | INFO     | .. there are 2 such processes running
[2025-07-27 20:43:34] 2025-07-28 00:42:55,201 | INFO     | monitor loop #343: job 0:6747524954 is in state 'finished'
[2025-07-27 20:43:34] 2025-07-28 00:42:55,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:43:34] 2025-07-28 00:42:55,452 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:43:34] 2025-07-28 00:42:56,022 | INFO     | job 6747524954 has state=finished
[2025-07-27 20:43:34] 2025-07-28 00:42:56,022 | INFO     | preparing for final server update for job 6747524954 in state='finished'
[2025-07-27 20:43:34] 2025-07-28 00:42:56,023 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:43:34] 2025-07-28 00:42:56,023 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:43:34] 2025-07-28 00:42:56,023 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:43:34] 2025-07-28 00:42:56,024 | INFO     | job 6747524954 has finished - writing final server update
[2025-07-27 20:43:34] 2025-07-28 00:42:56,024 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:43:34] 2025-07-28 00:42:56,025 | INFO     | executing command: lscpu
[2025-07-27 20:43:34] 2025-07-28 00:42:56,057 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:43:34] 2025-07-28 00:42:57,703 | INFO     | monitor loop #344: job 0:6747524954 is in state 'finished'
[2025-07-27 20:43:34] 2025-07-28 00:42:57,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:43:34] 2025-07-28 00:43:00,207 | INFO     | monitor loop #345: job 0:6747524954 is in state 'finished'
[2025-07-27 20:43:34] 2025-07-28 00:43:00,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:43:34] 2025-07-28 00:43:01,791 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:43:34] 2025-07-28 00:43:01,795 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1954.7695000000003
[2025-07-27 20:43:34] 2025-07-28 00:43:01,799 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747524954/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:43:34] 2025-07-28 00:43:01,799 | INFO     | extracted standard info from prmon json
[2025-07-27 20:43:34] 2025-07-28 00:43:01,800 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:43:34] 2025-07-28 00:43:01,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:43:34] 2025-07-28 00:43:01,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:43:34] 2025-07-28 00:43:01,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:43:34] 2025-07-28 00:43:01,802 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:43:34] 2025-07-28 00:43:01,802 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,803 | INFO     | sum of deviations: -7850885440.0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,803 | INFO     | mean x: 1753661181.5
[2025-07-27 20:43:34] 2025-07-28 00:43:01,803 | INFO     | mean y: 2675886.0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,803 | INFO     | -- intersect: 141241176595.9685
[2025-07-27 20:43:34] 2025-07-28 00:43:01,803 | INFO     | intersect: 141241176595.9685
[2025-07-27 20:43:34] 2025-07-28 00:43:01,803 | INFO     | chi2: 0.01820915681094936
[2025-07-27 20:43:34] 2025-07-28 00:43:01,804 | INFO     | -- intersect: 141241176595.9685
[2025-07-27 20:43:34] 2025-07-28 00:43:01,804 | INFO     | current memory leak: -80.54 B/s (using 68 data points, chi2=0.02)
[2025-07-27 20:43:34] 2025-07-28 00:43:01,804 | INFO     | could have reported an average CPU frequency of 2190 MHz (6 samples)
[2025-07-27 20:43:34] 2025-07-28 00:43:01,804 | INFO     | ..............................
[2025-07-27 20:43:34] 2025-07-28 00:43:01,804 | INFO     | . Timing measurements:
[2025-07-27 20:43:34] 2025-07-28 00:43:01,804 | INFO     | . get job = 0 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,805 | INFO     | . initial setup = 2 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,805 | INFO     | . payload setup = 7 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,805 | INFO     | . stage-in = 0 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,805 | INFO     | . payload execution = 4539 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,805 | INFO     | . stage-out = 0 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,805 | INFO     | . log creation = 0 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,805 | INFO     | ..............................
[2025-07-27 20:43:34] 2025-07-28 00:43:01,882 | INFO     | 
[2025-07-27 20:43:34] 2025-07-28 00:43:01,883 | INFO     | job summary report
[2025-07-27 20:43:34] 2025-07-28 00:43:01,883 | INFO     | --------------------------------------------------
[2025-07-27 20:43:34] 2025-07-28 00:43:01,883 | INFO     | PanDA job id: 6747524954
[2025-07-27 20:43:34] 2025-07-28 00:43:01,883 | INFO     | task id: 45743349
[2025-07-27 20:43:34] 2025-07-28 00:43:01,883 | INFO     | errors: (none)
[2025-07-27 20:43:34] 2025-07-28 00:43:01,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:43:34] 2025-07-28 00:43:01,883 | INFO     | pilot state: finished 
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | transexitcode: 0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | exeerrorcode: 0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | exeerrordiag: 
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | exitcode: 0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | exitmsg: OK
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | cpuconsumptiontime: 33399 s
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | nevents: 400
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | neventsw: 0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | pid: 6920
[2025-07-27 20:43:34] 2025-07-28 00:43:01,884 | INFO     | pgrp: 6920
[2025-07-27 20:43:34] 2025-07-28 00:43:01,885 | INFO     | corecount: 8
[2025-07-27 20:43:34] 2025-07-28 00:43:01,885 | INFO     | event service: False
[2025-07-27 20:43:34] 2025-07-28 00:43:01,885 | INFO     | sizes: {0: 2397474, 5: 2397736, 11: 2397792, 4550: 2423984, 4552: 2432982, 4553: 2433038, 4560: 2433360}
[2025-07-27 20:43:34] 2025-07-28 00:43:01,885 | INFO     | --------------------------------------------------
[2025-07-27 20:43:34] 2025-07-28 00:43:01,885 | INFO     | 
[2025-07-27 20:43:34] 2025-07-28 00:43:01,885 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:43:34] 2025-07-28 00:43:01,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:43:34] 2025-07-28 00:43:01,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,906 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:43:34] 2025-07-28 00:43:01,906 | INFO     | job 6747524954 has completed (purged errors)
[2025-07-27 20:43:34] 2025-07-28 00:43:01,906 | INFO     | overall cleanup function is called
[2025-07-27 20:43:34] 2025-07-28 00:43:02,914 | INFO     | --- collectZombieJob: --- 10, [6920]
[2025-07-27 20:43:34] 2025-07-28 00:43:02,914 | INFO     | zombie collector waiting for pid 6920
[2025-07-27 20:43:34] 2025-07-28 00:43:02,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:43:34] 2025-07-28 00:43:02,915 | INFO     | collected zombie processes
[2025-07-27 20:43:34] 2025-07-28 00:43:02,915 | INFO     | will attempt to kill all subprocesses of pid=6920
[2025-07-27 20:43:34] 2025-07-28 00:43:03,031 | INFO     | process IDs to be killed: [6920] (in reverse order)
[2025-07-27 20:43:34] 2025-07-28 00:43:03,086 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:43:34] 2025-07-28 00:43:03,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:43:34] 2025-07-28 00:43:03,090 | INFO     | did not find any defunct processes belonging to 6920
[2025-07-27 20:43:34] 2025-07-28 00:43:03,093 | INFO     | did not find any defunct processes belonging to 6920
[2025-07-27 20:43:34] 2025-07-28 00:43:03,094 | INFO     | ready for new job
[2025-07-27 20:43:34] 2025-07-28 00:43:03,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:43:34] 2025-07-28 00:43:03,095 | INFO     | ***************************************
[2025-07-27 20:43:34] 2025-07-28 00:43:03,096 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:43:34] 2025-07-28 00:43:03,096 | INFO     | ***************************************
[2025-07-27 20:43:34] 2025-07-28 00:43:03,096 | INFO     | 
[2025-07-27 20:43:34] 2025-07-28 00:43:03,097 | INFO     | architecture information:
[2025-07-27 20:43:34] 2025-07-28 00:43:03,097 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:43:34] 2025-07-28 00:43:03,110 | INFO     | cat /etc/os-release:
[2025-07-27 20:43:34] NAME="CentOS Linux"
[2025-07-27 20:43:34] VERSION="7 (Core)"
[2025-07-27 20:43:34] ID="centos"
[2025-07-27 20:43:34] ID_LIKE="rhel fedora"
[2025-07-27 20:43:34] VERSION_ID="7"
[2025-07-27 20:43:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:43:34] ANSI_COLOR="0;31"
[2025-07-27 20:43:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:43:34] HOME_URL="https://www.centos.org/"
[2025-07-27 20:43:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:43:34] 
[2025-07-27 20:43:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:43:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:43:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:43:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:43:34] 
[2025-07-27 20:43:34] 2025-07-28 00:43:03,111 | INFO     | ***************************************
[2025-07-27 20:43:34] 2025-07-28 00:43:03,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:43:34] 2025-07-28 00:43:03,630 | INFO     | sufficient remaining disk space (32842448896 B)
[2025-07-27 20:43:34] 2025-07-28 00:43:03,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:43:34] 2025-07-28 00:43:03,630 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:43:34] 2025-07-28 00:43:03,630 | INFO     | update_server=False
[2025-07-27 20:43:34] 2025-07-28 00:43:03,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:43:34] 2025-07-28 00:43:03,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:43:34] 2025-07-28 00:43:03,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:43:34] 2025-07-28 00:43:03,716 | INFO     | aborting loop
[2025-07-27 20:43:34] 2025-07-28 00:43:03,855 | INFO     | all job control threads have been joined
[2025-07-27 20:43:34] 2025-07-28 00:43:04,008 | INFO     | all data control threads have been joined
[2025-07-27 20:43:34] 2025-07-28 00:43:04,361 | INFO     | all payload control threads have been joined
[2025-07-27 20:43:34] 2025-07-28 00:43:04,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:43:34] 2025-07-28 00:43:04,636 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:04,637 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:04,721 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:04,859 | INFO     | [job] control thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:04,985 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:05,014 | INFO     | [data] control thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:05,071 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:05,366 | INFO     | [payload] control thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:05,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:05,789 | INFO     | [job] validate thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:05,929 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:05,982 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:06,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:43:34] 2025-07-28 00:43:06,105 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:06,116 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:06,439 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:10,049 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:43:34] 2025-07-28 00:43:10,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216451491648)>', '<ExcThread(monitor, started 140216161519360)>']
[2025-07-27 20:43:34] 2025-07-28 00:43:15,389 | INFO     | all workflow threads have been joined
[2025-07-27 20:43:34] 2025-07-28 00:43:15,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:43:34] 2025-07-28 00:43:15,390 | INFO     | traces error code: 0
[2025-07-27 20:43:34] 2025-07-28 00:43:15,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:43:34] 2025-07-28 00:43:34,582 | INFO     | PID=32690 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:43:34] 2025-07-28 00:43:34,582 | INFO     | .. there are 2 such processes running
[2025-07-27 20:43:34] 2025-07-28 00:43:34,582 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:43:34] 2025-07-28 00:43:34,582 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:43:34] 2025-07-28 00:43:34,582 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:43:34] 2025-07-28 00:43:34,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:43:34] 2025-07-28 00:43:34,583 | INFO     | [monitor] control thread has ended
[2025-07-27 20:43:34] 2025-07-28 00:43:34,697 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:43:34] 2025-07-28 00:43:34,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:43:34] 2025-07-28 00:43:34,703 [wrapper] pilotpid: 32690
[2025-07-27 20:43:34] 2025-07-28 00:43:34,706 [wrapper] Pilot exit status: 0
[2025-07-27 20:43:34] 2025-07-28 00:43:34,717 [wrapper] pandaids: 6747524954
[2025-07-27 20:43:34] 2025-07-28 00:43:34,747 [wrapper] cleanup supervisor_pilot 23825 32691
[2025-07-27 20:43:34] 2025-07-28 00:43:34,750 [wrapper] Test setup, not cleaning
[2025-07-27 20:43:34] 2025-07-28 00:43:34,753 [wrapper] apfmon messages muted
[2025-07-27 20:43:34] 2025-07-28 00:43:34,756 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:43:34] 2025-07-28 00:43:34,759 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:43:34]  *** Error codes and diagnostics ***
[2025-07-27 20:43:34]     "exeErrorCode": 0,
[2025-07-27 20:43:34]     "exeErrorDiag": "",
[2025-07-27 20:43:34]     "pilotErrorCode": 0,
[2025-07-27 20:43:34]     "pilotErrorDiag": "",
[2025-07-27 20:43:34]  *** Listing of results directory ***
[2025-07-27 20:43:34] total 428724
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 11:40 queuedata.json
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 11:40 pilot3.tar.gz
[2025-07-27 20:43:34] -rwx------ 1 boincer umatlas     36292 Jul 27 11:41 runpilot2-wrapper.sh
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas       100 Jul 27 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:43:34] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 19:26 run_atlas
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas       105 Jul 27 19:26 job.xml
[2025-07-27 20:43:34] -rw-r--r-- 2 boincer umatlas 230173417 Jul 27 19:26 EVNT.45743347._002832.pool.root.1
[2025-07-27 20:43:34] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:26 start_atlas.sh
[2025-07-27 20:43:34] drwxrwx--x 2 boincer umatlas      4096 Jul 27 19:26 shared
[2025-07-27 20:43:34] -rw-r--r-- 2 boincer umatlas    542892 Jul 27 19:26 input.tar.gz
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas         0 Jul 27 19:26 boinc_lockfile
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 19:26 pandaJob.out
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas    980125 Jul 27 19:26 agis_schedconf.cvmfs.json
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas   1593052 Jul 27 19:26 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:43:34] drwx------ 4 boincer umatlas      4096 Jul 27 19:26 pilot3
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas      6048 Jul 27 20:38 init_data.xml
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas 203436490 Jul 27 20:42 HITS.45743349._051867.pool.root.1
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas       529 Jul 27 20:42 boinc_task_state.xml
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas        95 Jul 27 20:42 pilot_heartbeat.json
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas      1060 Jul 27 20:42 memory_monitor_summary.json
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas    307630 Jul 27 20:42 log.45743349._051867.job.log.tgz.1
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas      7837 Jul 27 20:43 heartbeat.json
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas        27 Jul 27 20:43 wrapper_checkpoint.txt
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 20:43 boinc_mmap_file
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas       820 Jul 27 20:43 pilotlog.txt
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas    454921 Jul 27 20:43 log.45743349._051867.job.log.1
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas       357 Jul 27 20:43 output.list
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas       620 Jul 27 20:43 runtime_log
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas    778240 Jul 27 20:43 result.tar.gz
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas       658 Jul 27 20:43 SHJNDmegI07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzkVLDmjgnDkn.diag
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 20:43 runtime_log.err
[2025-07-27 20:43:34] -rw-r--r-- 1 boincer umatlas     21762 Jul 27 20:43 stderr.txt
[2025-07-27 20:43:34] HITS file was successfully produced:
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas 203436490 Jul 27 20:42 shared/HITS.pool.root.1
[2025-07-27 20:43:34]  *** Contents of shared directory: ***
[2025-07-27 20:43:34] total 424768
[2025-07-27 20:43:34] -rw-r--r-- 2 boincer umatlas 230173417 Jul 27 19:26 ATLAS.root_0
[2025-07-27 20:43:34] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:26 start_atlas.sh
[2025-07-27 20:43:34] -rw-r--r-- 2 boincer umatlas    542892 Jul 27 19:26 input.tar.gz
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas 203436490 Jul 27 20:42 HITS.pool.root.1
[2025-07-27 20:43:34] -rw------- 1 boincer umatlas    778240 Jul 27 20:43 result.tar.gz
20:43:36 (29064): run_atlas exited; CPU time 33387.626052
20:43:36 (29064): called boinc_finish(0)

</stderr_txt>
]]>

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