Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:33:53 (12972): wrapper (7.7.26015): starting
13:33:53 (12972): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 13:33:53] Arguments: --nthreads 8
[2025-07-28 13:33:53] Threads: 8
[2025-07-28 13:33:53] Checking for CVMFS
[2025-07-28 13:33:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 13:33:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 13:33:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 13:33:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 13:33:55] 2.11.2.0 20313 111095 108788 148845 0 109 21015478 25165824 4099 130560 0 74049027 99.854 52812118 5327 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 13:33:55] CVMFS is ok
[2025-07-28 13:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 13:33:55] Checking for apptainer binary...
[2025-07-28 13:33:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 13:33:55] Running /usr/bin/apptainer --version
[2025-07-28 13:33:55] apptainer version 1.3.2-1.el7
[2025-07-28 13:33:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 13:33:56] cg-vwn236.simple-grid.lan
[2025-07-28 13:33:56] apptainer works
[2025-07-28 13:33:56] Set ATHENA_PROC_NUMBER=8
[2025-07-28 13:33:56] Set ATHENA_CORE_NUMBER=8
[2025-07-28 13:33:56] Starting ATLAS job with PandaID=6747499824
[2025-07-28 13:33:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:53:09]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:53:09] 2025-07-28 15:52:35,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:53:09] 2025-07-28 15:52:36,749 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:53:09] 2025-07-28 15:52:36,750 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-07-28 17:53:09] 2025-07-28 15:52:36,752 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6747499824/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:53:09] 2025-07-28 15:52:36,753 | INFO     | extracted standard info from prmon json
[2025-07-28 17:53:09] 2025-07-28 15:52:36,754 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:53:09] 2025-07-28 15:52:36,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:53:09] 2025-07-28 15:52:36,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:53:09] 2025-07-28 15:52:36,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:53:09] 2025-07-28 15:52:36,761 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:53:09] 2025-07-28 15:52:36,762 | INFO     | sum of square deviations: 5021496942.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,764 | INFO     | sum of deviations: 3309682368.000005
[2025-07-28 17:53:09] 2025-07-28 15:52:36,764 | INFO     | mean x: 1753710200.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,764 | INFO     | mean y: 2519648.2411067192
[2025-07-28 17:53:09] 2025-07-28 15:52:36,764 | INFO     | -- intersect: -1153355540.8832765
[2025-07-28 17:53:09] 2025-07-28 15:52:36,764 | INFO     | intersect: -1153355540.8832765
[2025-07-28 17:53:09] 2025-07-28 15:52:36,765 | INFO     | chi2: 1.8863972587075064
[2025-07-28 17:53:09] 2025-07-28 15:52:36,765 | INFO     | sum of square deviations: 4729621702.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,768 | INFO     | sum of deviations: 3231769477.500003
[2025-07-28 17:53:09] 2025-07-28 15:52:36,768 | INFO     | mean x: 1753710047.5
[2025-07-28 17:53:09] 2025-07-28 15:52:36,768 | INFO     | mean y: 2519607.5282258065
[2025-07-28 17:53:09] 2025-07-28 15:52:36,768 | INFO     | -- intersect: -1195797501.321927
[2025-07-28 17:53:09] 2025-07-28 15:52:36,768 | INFO     | intersect: -1195797501.321927
[2025-07-28 17:53:09] 2025-07-28 15:52:36,769 | INFO     | chi2: 1.886563303731543
[2025-07-28 17:53:09] 2025-07-28 15:52:36,769 | INFO     | current chi2=1.886563303731543 (change=-0.008802229926393014 %)
[2025-07-28 17:53:09] 2025-07-28 15:52:36,769 | INFO     | right removable region: 247
[2025-07-28 17:53:09] 2025-07-28 15:52:36,769 | INFO     | sum of square deviations: 4729621702.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,771 | INFO     | sum of deviations: -42579122094.99999
[2025-07-28 17:53:09] 2025-07-28 15:52:36,772 | INFO     | mean x: 1753710352.5
[2025-07-28 17:53:09] 2025-07-28 15:52:36,772 | INFO     | mean y: 2543456.2258064514
[2025-07-28 17:53:09] 2025-07-28 15:52:36,772 | INFO     | -- intersect: 15790581469.242134
[2025-07-28 17:53:09] 2025-07-28 15:52:36,772 | INFO     | intersect: 15790581469.242134
[2025-07-28 17:53:09] 2025-07-28 15:52:36,773 | INFO     | chi2: 0.203481048746282
[2025-07-28 17:53:09] 2025-07-28 15:52:36,773 | INFO     | current chi2=0.203481048746282 (change=89.21324509951313 %)
[2025-07-28 17:53:09] 2025-07-28 15:52:36,774 | INFO     | sum of square deviations: 4449281562.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,776 | INFO     | sum of deviations: -42951665137.99999
[2025-07-28 17:53:09] 2025-07-28 15:52:36,776 | INFO     | mean x: 1753710505.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,776 | INFO     | mean y: 2543630.6625514403
[2025-07-28 17:53:09] 2025-07-28 15:52:36,776 | INFO     | -- intersect: 16932195150.826979
[2025-07-28 17:53:09] 2025-07-28 15:52:36,776 | INFO     | intersect: 16932195150.826979
[2025-07-28 17:53:09] 2025-07-28 15:52:36,777 | INFO     | chi2: 0.18463887425182682
[2025-07-28 17:53:09] 2025-07-28 15:52:36,777 | INFO     | current chi2=0.18463887425182682 (change=9.25991614970948 %)
[2025-07-28 17:53:09] 2025-07-28 15:52:36,777 | INFO     | left removable region: 20
[2025-07-28 17:53:09] 2025-07-28 15:52:36,777 | INFO     | sum of square deviations: 3627000098.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,779 | INFO     | sum of deviations: -27354725259.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,779 | INFO     | mean x: 1753710627.0
[2025-07-28 17:53:09] 2025-07-28 15:52:36,779 | INFO     | mean y: 2535261.114537445
[2025-07-28 17:53:09] 2025-07-28 15:52:36,780 | INFO     | -- intersect: 13228967874.619701
[2025-07-28 17:53:09] 2025-07-28 15:52:36,780 | INFO     | intersect: 13228967874.619701
[2025-07-28 17:53:09] 2025-07-28 15:52:36,780 | INFO     | chi2: 0.1528130908756349
[2025-07-28 17:53:09] 2025-07-28 15:52:36,780 | INFO     | -- intersect: 13228967874.619701
[2025-07-28 17:53:09] 2025-07-28 15:52:36,780 | INFO     | current memory leak: -7.54 B/s (using 227 data points, chi2=0.15)
[2025-07-28 17:53:09] 2025-07-28 15:52:36,781 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | ..............................
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . Timing measurements:
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . get job = 0 s
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . initial setup = 2 s
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . payload setup = 15 s
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . stage-in = 0 s
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . payload execution = 15446 s
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . stage-out = 1 s
[2025-07-28 17:53:09] 2025-07-28 15:52:36,782 | INFO     | . log creation = 0 s
[2025-07-28 17:53:09] 2025-07-28 15:52:36,783 | INFO     | ..............................
[2025-07-28 17:53:09] 2025-07-28 15:52:37,000 | INFO     | 
[2025-07-28 17:53:09] 2025-07-28 15:52:37,000 | INFO     | job summary report
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | --------------------------------------------------
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | PanDA job id: 6747499824
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | task id: 45743349
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | errors: (none)
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | pilot state: finished 
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | transexitcode: 0
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | exeerrorcode: 0
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | exeerrordiag: 
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | exitcode: 0
[2025-07-28 17:53:09] 2025-07-28 15:52:37,001 | INFO     | exitmsg: OK
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | cpuconsumptiontime: 62171 s
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | nevents: 400
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | neventsw: 0
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | pid: 23603
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | pgrp: 23603
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | corecount: 8
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | event service: False
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | sizes: {0: 2397249, 1: 2397504, 2: 2397504, 9: 2397794, 12: 2397822, 15464: 2428641, 15465: 2428768, 15466: 2432258, 15467: 2432314, 15478: 2432508}
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | --------------------------------------------------
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | 
[2025-07-28 17:53:09] 2025-07-28 15:52:37,002 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-07-28 17:53:09] 2025-07-28 15:52:37,029 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,031 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:53:09] 2025-07-28 15:52:37,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:53:09] 2025-07-28 15:52:37,031 | INFO     | job 6747499824 has completed (purged errors)
[2025-07-28 17:53:09] 2025-07-28 15:52:37,032 | INFO     | overall cleanup function is called
[2025-07-28 17:53:09] 2025-07-28 15:52:38,038 | INFO     | --- collectZombieJob: --- 10, [23603]
[2025-07-28 17:53:09] 2025-07-28 15:52:38,038 | INFO     | zombie collector waiting for pid 23603
[2025-07-28 17:53:09] 2025-07-28 15:52:38,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:53:09] 2025-07-28 15:52:38,039 | INFO     | collected zombie processes
[2025-07-28 17:53:09] 2025-07-28 15:52:38,039 | INFO     | will attempt to kill all subprocesses of pid=23603
[2025-07-28 17:53:09] 2025-07-28 15:52:38,124 | INFO     | process IDs to be killed: [23603] (in reverse order)
[2025-07-28 17:53:09] 2025-07-28 15:52:38,185 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:53:09] 2025-07-28 15:52:38,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:53:09] 2025-07-28 15:52:38,189 | INFO     | did not find any defunct processes belonging to 23603
[2025-07-28 17:53:09] 2025-07-28 15:52:38,191 | INFO     | did not find any defunct processes belonging to 23603
[2025-07-28 17:53:09] 2025-07-28 15:52:38,191 | INFO     | ready for new job
[2025-07-28 17:53:09] 2025-07-28 15:52:38,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:53:09] 2025-07-28 15:52:38,194 | INFO     | ***************************************
[2025-07-28 17:53:09] 2025-07-28 15:52:38,194 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:53:09] 2025-07-28 15:52:38,194 | INFO     | ***************************************
[2025-07-28 17:53:09] 2025-07-28 15:52:38,194 | INFO     | 
[2025-07-28 17:53:09] 2025-07-28 15:52:38,195 | INFO     | pilot is running in a VM
[2025-07-28 17:53:09] 2025-07-28 15:52:38,195 | INFO     | architecture information:
[2025-07-28 17:53:09] 2025-07-28 15:52:38,195 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:53:09] 2025-07-28 15:52:38,215 | INFO     | cat /etc/os-release:
[2025-07-28 17:53:09] NAME="CentOS Linux"
[2025-07-28 17:53:09] VERSION="7 (Core)"
[2025-07-28 17:53:09] ID="centos"
[2025-07-28 17:53:09] ID_LIKE="rhel fedora"
[2025-07-28 17:53:09] VERSION_ID="7"
[2025-07-28 17:53:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:53:09] ANSI_COLOR="0;31"
[2025-07-28 17:53:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:53:09] HOME_URL="https://www.centos.org/"
[2025-07-28 17:53:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:53:09] 
[2025-07-28 17:53:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:53:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:53:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:53:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:53:09] 
[2025-07-28 17:53:09] 2025-07-28 15:52:38,216 | INFO     | ***************************************
[2025-07-28 17:53:09] 2025-07-28 15:52:38,719 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-07-28 17:53:09] 2025-07-28 15:52:38,744 | INFO     | sufficient remaining disk space (497777901568 B)
[2025-07-28 17:53:09] 2025-07-28 15:52:38,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:53:09] 2025-07-28 15:52:38,744 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:53:09] 2025-07-28 15:52:38,744 | INFO     | update_server=False
[2025-07-28 17:53:09] 2025-07-28 15:52:38,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:53:09] 2025-07-28 15:52:38,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:53:09] 2025-07-28 15:52:38,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:53:09] 2025-07-28 15:52:39,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:53:09] 2025-07-28 15:52:39,142 | INFO     | aborting loop
[2025-07-28 17:53:09] 2025-07-28 15:52:39,191 | INFO     | all data control threads have been joined
[2025-07-28 17:53:09] 2025-07-28 15:52:39,250 | INFO     | all payload control threads have been joined
[2025-07-28 17:53:09] 2025-07-28 15:52:39,748 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:39,750 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,147 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,192 | INFO     | [data] control thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,247 | INFO     | all job control threads have been joined
[2025-07-28 17:53:09] 2025-07-28 15:52:40,253 | INFO     | [payload] control thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,354 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,399 | INFO     | [job] validate thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,657 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,853 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:40,915 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:41,019 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:41,185 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:41,203 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:41,253 | INFO     | [job] control thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:41,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:53:09] 2025-07-28 15:52:45,709 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:49,052 | INFO     | job.realtimelogging is not enabled
[2025-07-28 17:53:09] 2025-07-28 15:52:50,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:53:09] 2025-07-28 15:52:51,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974880810816)>', '<ExcThread(monitor, started 139974284388096)>']
[2025-07-28 17:53:09] 2025-07-28 15:52:56,805 | INFO     | all workflow threads have been joined
[2025-07-28 17:53:09] 2025-07-28 15:52:56,805 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:53:09] 2025-07-28 15:52:56,805 | INFO     | traces error code: 0
[2025-07-28 17:53:09] 2025-07-28 15:52:56,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:53:09] 2025-07-28 15:53:08,723 | INFO     | PID=17000 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-28 17:53:09] 2025-07-28 15:53:08,724 | INFO     | .. there are 5 such processes running
[2025-07-28 17:53:09] 2025-07-28 15:53:08,725 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:53:09] 2025-07-28 15:53:08,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:53:09] 2025-07-28 15:53:08,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:53:09] 2025-07-28 15:53:08,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:53:09] 2025-07-28 15:53:08,725 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 17:53:09] 2025-07-28 15:53:08,725 | INFO     | [monitor] control thread has ended
[2025-07-28 17:53:09] 2025-07-28 15:53:08,942 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:53:09] 2025-07-28 15:53:08,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:53:09] 2025-07-28 15:53:08,953 [wrapper] pilotpid: 17000
[2025-07-28 17:53:09] 2025-07-28 15:53:08,957 [wrapper] Pilot exit status: 0
[2025-07-28 17:53:09] 2025-07-28 15:53:08,975 [wrapper] pandaids: 6747499824
[2025-07-28 17:53:09] 2025-07-28 15:53:09,021 [wrapper] cleanup supervisor_pilot 32689 17001
[2025-07-28 17:53:09] 2025-07-28 15:53:09,033 [wrapper] Test setup, not cleaning
[2025-07-28 17:53:09] 2025-07-28 15:53:09,047 [wrapper] apfmon messages muted
[2025-07-28 17:53:09] 2025-07-28 15:53:09,051 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:53:09] 2025-07-28 15:53:09,055 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:53:09]  *** Error codes and diagnostics ***
[2025-07-28 17:53:09]     "exeErrorCode": 0,
[2025-07-28 17:53:09]     "exeErrorDiag": "",
[2025-07-28 17:53:09]     "pilotErrorCode": 0,
[2025-07-28 17:53:09]     "pilotErrorDiag": "",
[2025-07-28 17:53:09]  *** Listing of results directory ***
[2025-07-28 17:53:09] total 437540
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc    530466 Jul 27 16:53 pilot3.tar.gz
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc      5112 Jul 27 17:01 queuedata.json
[2025-07-28 17:53:09] -rwx------. 1 boinc boinc     36292 Jul 27 17:01 runpilot2-wrapper.sh
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc       100 Jul 28 13:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:53:09] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 13:33 run_atlas
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc       105 Jul 28 13:33 job.xml
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc      6391 Jul 28 13:33 init_data.xml
[2025-07-28 17:53:09] -rw-r--r--. 2 boinc boinc 229653273 Jul 28 13:33 EVNT.45743347._002742.pool.root.1
[2025-07-28 17:53:09] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:33 start_atlas.sh
[2025-07-28 17:53:09] drwxrwx--x. 2 boinc boinc        68 Jul 28 13:33 shared
[2025-07-28 17:53:09] -rw-r--r--. 2 boinc boinc    542899 Jul 28 13:33 input.tar.gz
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc         0 Jul 28 13:33 boinc_lockfile
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc      2563 Jul 28 13:33 pandaJob.out
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc    978460 Jul 28 13:34 agis_schedconf.cvmfs.json
[2025-07-28 17:53:09] drwx------. 4 boinc boinc      4096 Jul 28 13:34 pilot3
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc 211048736 Jul 28 17:51 HITS.45743349._051209.pool.root.1
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc       530 Jul 28 17:51 boinc_task_state.xml
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc      1030 Jul 28 17:52 memory_monitor_summary.json
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc   1589827 Jul 28 17:52 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc    398994 Jul 28 17:52 log.45743349._051209.job.log.tgz.1
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc      7781 Jul 28 17:52 heartbeat.json
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc      8192 Jul 28 17:52 boinc_mmap_file
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc        28 Jul 28 17:52 wrapper_checkpoint.txt
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc       890 Jul 28 17:53 pilotlog.txt
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc        95 Jul 28 17:53 pilot_heartbeat.json
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc   1343225 Jul 28 17:53 log.45743349._051209.job.log.1
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc       357 Jul 28 17:53 output.list
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc       620 Jul 28 17:53 runtime_log
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc   1761280 Jul 28 17:53 result.tar.gz
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc      8674 Jul 28 17:53 runtime_log.err
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc       657 Jul 28 17:53 8VTKDme3H07n9Rq4apOajLDm4fhM0noT9bVof3QYDmri2KDmrXkrdn.diag
[2025-07-28 17:53:09] -rw-r--r--. 1 boinc boinc     20783 Jul 28 17:53 stderr.txt
[2025-07-28 17:53:09] HITS file was successfully produced:
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc 211048736 Jul 28 17:51 shared/HITS.pool.root.1
[2025-07-28 17:53:09]  *** Contents of shared directory: ***
[2025-07-28 17:53:09] total 432644
[2025-07-28 17:53:09] -rw-r--r--. 2 boinc boinc 229653273 Jul 28 13:33 ATLAS.root_0
[2025-07-28 17:53:09] -rw-r--r--. 2 boinc boinc     15095 Jul 28 13:33 start_atlas.sh
[2025-07-28 17:53:09] -rw-r--r--. 2 boinc boinc    542899 Jul 28 13:33 input.tar.gz
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc 211048736 Jul 28 17:51 HITS.pool.root.1
[2025-07-28 17:53:09] -rw-------. 1 boinc boinc   1761280 Jul 28 17:53 result.tar.gz
17:53:10 (12972): run_atlas exited; CPU time 62345.287512
17:53:10 (12972): called boinc_finish(0)

</stderr_txt>
]]>

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