Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:21 (1635574): wrapper (7.7.26015): starting
19:31:21 (1635574): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 19:31:21] Arguments: --nthreads 8
[2025-07-27 19:31:21] Threads: 8
[2025-07-27 19:31:21] Checking for CVMFS
[2025-07-27 19:31:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:31:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:31:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:31:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:31:22] 2.13.1.0 5097 14640 198856 148828 2 196 24512345 40960001 10196 16776704 0 45531695 99.934 17669087 43561 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:31:22] CVMFS is ok
[2025-07-27 19:31:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:31:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:31:22] Further information can be found at the LHC@home message board.
[2025-07-27 19:31:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:31:22] Checking for apptainer binary...
[2025-07-27 19:31:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:31:22] Running /usr/bin/apptainer --version
[2025-07-27 19:31:22] apptainer version 1.4.1-1.el9
[2025-07-27 19:31:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:31:22] c-212-6.aglt2.org
[2025-07-27 19:31:22] apptainer works
[2025-07-27 19:31:22] Set ATHENA_PROC_NUMBER=8
[2025-07-27 19:31:22] Set ATHENA_CORE_NUMBER=8
[2025-07-27 19:31:22] Starting ATLAS job with PandaID=6747578670
[2025-07-27 19:31:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:55:02]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:55:02]  scope=mc23_13p6TeV
[2025-07-27 20:55:02]  status=None
[2025-07-27 20:55:02]  status_code=0
[2025-07-27 20:55:02]  storage_token=
[2025-07-27 20:55:02]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6747578670/log.45743349._053338.job.log.tgz.1
[2025-07-27 20:55:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/c2/log.45743349._053338.job.log.tgz.1
[2025-07-27 20:55:02]  workdir=None
[2025-07-27 20:55:02] ]
[2025-07-27 20:55:02] 2025-07-28 00:54:17,839 | INFO     | transferring file log.45743349._053338.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6747578670/log.45743349._053338.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-27 20:55:02] 2025-07-28 00:54:17,840 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6747578670/log.45743349._053338.job.log.tgz.1 /tmp/boinchome/slots/10/log.45743349._053338.j
[2025-07-27 20:55:02] 2025-07-28 00:54:17,870 | INFO     | adding to output.list: log.45743349._053338.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/c2/log.45743349._053338.job.log.tg
[2025-07-27 20:55:02] 2025-07-28 00:54:17,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:55:02] 2025-07-28 00:54:17,872 | INFO     | summary of transferred files:
[2025-07-27 20:55:02] 2025-07-28 00:54:17,872 | INFO     |  -- lfn=log.45743349._053338.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:55:02] 2025-07-28 00:54:17,872 | INFO     | stage-out finished correctly
[2025-07-27 20:55:02] 2025-07-28 00:54:18,421 | INFO     | monitor loop #363: job 0:6747578670 is in state 'finished'
[2025-07-27 20:55:02] 2025-07-28 00:54:18,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:55:02] 2025-07-28 00:54:20,847 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:55:02] 2025-07-28 00:54:20,927 | INFO     | monitor loop #364: job 0:6747578670 is in state 'finished'
[2025-07-27 20:55:02] 2025-07-28 00:54:20,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:55:02] 2025-07-28 00:54:23,088 | INFO     | job 6747578670 has state=finished
[2025-07-27 20:55:02] 2025-07-28 00:54:23,089 | INFO     | preparing for final server update for job 6747578670 in state='finished'
[2025-07-27 20:55:02] 2025-07-28 00:54:23,089 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:55:02] 2025-07-28 00:54:23,089 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:55:02] 2025-07-28 00:54:23,090 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:55:02] 2025-07-28 00:54:23,090 | INFO     | job 6747578670 has finished - writing final server update
[2025-07-27 20:55:02] 2025-07-28 00:54:23,090 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:55:02] 2025-07-28 00:54:23,091 | INFO     | executing command: lscpu
[2025-07-27 20:55:02] 2025-07-28 00:54:23,151 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:55:02] 2025-07-28 00:54:23,433 | INFO     | monitor loop #365: job 0:6747578670 is in state 'finished'
[2025-07-27 20:55:02] 2025-07-28 00:54:23,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:55:02] 2025-07-28 00:54:25,939 | INFO     | monitor loop #366: job 0:6747578670 is in state 'finished'
[2025-07-27 20:55:02] 2025-07-28 00:54:25,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:55:02] 2025-07-28 00:54:28,447 | INFO     | monitor loop #367: job 0:6747578670 is in state 'finished'
[2025-07-27 20:55:02] 2025-07-28 00:54:28,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:55:02] 2025-07-28 00:54:29,372 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:55:02] 2025-07-28 00:54:29,377 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3268.4154375
[2025-07-27 20:55:02] 2025-07-28 00:54:29,389 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6747578670/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:55:02] 2025-07-28 00:54:29,392 | INFO     | extracted standard info from prmon json
[2025-07-27 20:55:02] 2025-07-28 00:54:29,394 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:55:02] 2025-07-28 00:54:29,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:55:02] 2025-07-28 00:54:29,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:55:02] 2025-07-28 00:54:29,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:55:02] 2025-07-28 00:54:29,400 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:55:02] 2025-07-28 00:54:29,400 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 20:55:02] 2025-07-28 00:54:29,401 | INFO     | sum of deviations: -2542222641.0000005
[2025-07-27 20:55:02] 2025-07-28 00:54:29,401 | INFO     | mean x: 1753661677.5
[2025-07-27 20:55:02] 2025-07-28 00:54:29,401 | INFO     | mean y: 2549539.4594594594
[2025-07-27 20:55:02] 2025-07-28 00:54:29,401 | INFO     | -- intersect: 35489209620.222565
[2025-07-27 20:55:02] 2025-07-28 00:54:29,402 | INFO     | intersect: 35489209620.222565
[2025-07-27 20:55:02] 2025-07-28 00:54:29,402 | INFO     | chi2: 0.0020053526834537985
[2025-07-27 20:55:02] 2025-07-28 00:54:29,402 | INFO     | -- intersect: 35489209620.222565
[2025-07-27 20:55:02] 2025-07-28 00:54:29,404 | INFO     | current memory leak: -20.24 B/s (using 74 data points, chi2=0.00)
[2025-07-27 20:55:02] 2025-07-28 00:54:29,404 | INFO     | could have reported an average CPU frequency of 3268 MHz (6 samples)
[2025-07-27 20:55:02] 2025-07-28 00:54:29,404 | INFO     | ..............................
[2025-07-27 20:55:02] 2025-07-28 00:54:29,404 | INFO     | . Timing measurements:
[2025-07-27 20:55:02] 2025-07-28 00:54:29,405 | INFO     | . get job = 0 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,405 | INFO     | . initial setup = 3 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,405 | INFO     | . payload setup = 14 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,407 | INFO     | . stage-in = 0 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,407 | INFO     | . payload execution = 4916 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,407 | INFO     | . stage-out = 0 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,407 | INFO     | . log creation = 0 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,407 | INFO     | ..............................
[2025-07-27 20:55:02] 2025-07-28 00:54:29,540 | INFO     | 
[2025-07-27 20:55:02] 2025-07-28 00:54:29,543 | INFO     | job summary report
[2025-07-27 20:55:02] 2025-07-28 00:54:29,543 | INFO     | --------------------------------------------------
[2025-07-27 20:55:02] 2025-07-28 00:54:29,543 | INFO     | PanDA job id: 6747578670
[2025-07-27 20:55:02] 2025-07-28 00:54:29,543 | INFO     | task id: 45743349
[2025-07-27 20:55:02] 2025-07-28 00:54:29,543 | INFO     | errors: (none)
[2025-07-27 20:55:02] 2025-07-28 00:54:29,543 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | pilot state: finished 
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | transexitcode: 0
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | exeerrorcode: 0
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | exeerrordiag: 
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | exitcode: 0
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | exitmsg: OK
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | cpuconsumptiontime: 35431 s
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | nevents: 400
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | neventsw: 0
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | pid: 1647639
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | pgrp: 1647639
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | corecount: 8
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | event service: False
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | sizes: {0: 2397425, 9: 2397687, 11: 2397715, 4934: 2424000, 4936: 2433000, 4939: 2433056, 4947: 2433378}
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | --------------------------------------------------
[2025-07-27 20:55:02] 2025-07-28 00:54:29,544 | INFO     | 
[2025-07-27 20:55:02] 2025-07-28 00:54:29,545 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-07-27 20:55:02] 2025-07-28 00:54:29,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,578 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:55:02] 2025-07-28 00:54:29,579 | INFO     | job 6747578670 has completed (purged errors)
[2025-07-27 20:55:02] 2025-07-28 00:54:29,579 | INFO     | overall cleanup function is called
[2025-07-27 20:55:02] 2025-07-28 00:54:30,587 | INFO     | --- collectZombieJob: --- 10, [1647639]
[2025-07-27 20:55:02] 2025-07-28 00:54:30,588 | INFO     | zombie collector waiting for pid 1647639
[2025-07-27 20:55:02] 2025-07-28 00:54:30,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:55:02] 2025-07-28 00:54:30,588 | INFO     | collected zombie processes
[2025-07-27 20:55:02] 2025-07-28 00:54:30,588 | INFO     | will attempt to kill all subprocesses of pid=1647639
[2025-07-27 20:55:02] 2025-07-28 00:54:30,980 | INFO     | process IDs to be killed: [1647639] (in reverse order)
[2025-07-27 20:55:02] 2025-07-28 00:54:31,103 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:55:02] 2025-07-28 00:54:31,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:55:02] 2025-07-28 00:54:31,120 | INFO     | did not find any defunct processes belonging to 1647639
[2025-07-27 20:55:02] 2025-07-28 00:54:31,134 | INFO     | did not find any defunct processes belonging to 1647639
[2025-07-27 20:55:02] 2025-07-28 00:54:31,134 | INFO     | ready for new job
[2025-07-27 20:55:02] 2025-07-28 00:54:31,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:55:02] 2025-07-28 00:54:31,136 | INFO     | ***************************************
[2025-07-27 20:55:02] 2025-07-28 00:54:31,136 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:55:02] 2025-07-28 00:54:31,136 | INFO     | ***************************************
[2025-07-27 20:55:02] 2025-07-28 00:54:31,136 | INFO     | 
[2025-07-27 20:55:02] 2025-07-28 00:54:31,141 | INFO     | architecture information:
[2025-07-27 20:55:02] 2025-07-28 00:54:31,141 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:55:02] 2025-07-28 00:54:31,158 | INFO     | cat /etc/os-release:
[2025-07-27 20:55:02] NAME="CentOS Linux"
[2025-07-27 20:55:02] VERSION="7 (Core)"
[2025-07-27 20:55:02] ID="centos"
[2025-07-27 20:55:02] ID_LIKE="rhel fedora"
[2025-07-27 20:55:02] VERSION_ID="7"
[2025-07-27 20:55:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:55:02] ANSI_COLOR="0;31"
[2025-07-27 20:55:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:55:02] HOME_URL="https://www.centos.org/"
[2025-07-27 20:55:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:55:02] 
[2025-07-27 20:55:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:55:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:55:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:55:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:55:02] 
[2025-07-27 20:55:02] 2025-07-28 00:54:31,158 | INFO     | ***************************************
[2025-07-27 20:55:02] 2025-07-28 00:54:31,661 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-27 20:55:02] 2025-07-28 00:54:31,689 | INFO     | sufficient remaining disk space (124936781824 B)
[2025-07-27 20:55:02] 2025-07-28 00:54:31,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:55:02] 2025-07-28 00:54:31,690 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:55:02] 2025-07-28 00:54:31,690 | INFO     | update_server=False
[2025-07-27 20:55:02] 2025-07-28 00:54:31,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:55:02] 2025-07-28 00:54:31,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:55:02] 2025-07-28 00:54:31,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:55:02] 2025-07-28 00:54:31,836 | INFO     | all data control threads have been joined
[2025-07-27 20:55:02] 2025-07-28 00:54:31,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:55:02] 2025-07-28 00:54:31,968 | INFO     | aborting loop
[2025-07-27 20:55:02] 2025-07-28 00:54:32,073 | INFO     | all job control threads have been joined
[2025-07-27 20:55:02] 2025-07-28 00:54:32,696 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:32,729 | INFO     | all payload control threads have been joined
[2025-07-27 20:55:02] 2025-07-28 00:54:32,842 | INFO     | [data] control thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:32,974 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,079 | INFO     | [job] control thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,081 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,369 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,441 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,554 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,604 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,696 | INFO     | [job] validate thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,697 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,735 | INFO     | [payload] control thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:33,777 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:34,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:55:02] 2025-07-28 00:54:35,506 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:35,697 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:42,681 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:55:02] 2025-07-28 00:54:43,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:55:02] 2025-07-28 00:54:45,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702425593664)>', '<ExcThread(monitor, started 140701719328512)>']
[2025-07-27 20:55:02] 2025-07-28 00:54:50,339 | INFO     | all workflow threads have been joined
[2025-07-27 20:55:02] 2025-07-28 00:54:50,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:55:02] 2025-07-28 00:54:50,340 | INFO     | traces error code: 0
[2025-07-27 20:55:02] 2025-07-28 00:54:50,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:55:02] 2025-07-28 00:55:02,157 | INFO     | PID=1640972 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:55:02] 2025-07-28 00:55:02,157 | INFO     | .. there are 18 such processes running
[2025-07-27 20:55:02] 2025-07-28 00:55:02,157 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:55:02] 2025-07-28 00:55:02,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:55:02] 2025-07-28 00:55:02,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:55:02] 2025-07-28 00:55:02,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:55:02] 2025-07-28 00:55:02,157 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 20:55:02] 2025-07-28 00:55:02,158 | INFO     | [monitor] control thread has ended
[2025-07-27 20:55:02] 2025-07-28 00:55:02,264 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:55:02] 2025-07-28 00:55:02,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:55:02] 2025-07-28 00:55:02,276 [wrapper] pilotpid: 1640972
[2025-07-27 20:55:02] 2025-07-28 00:55:02,282 [wrapper] Pilot exit status: 0
[2025-07-27 20:55:02] 2025-07-28 00:55:02,310 [wrapper] pandaids: 6747578670
[2025-07-27 20:55:02] 2025-07-28 00:55:02,414 [wrapper] cleanup supervisor_pilot 1946534 1640973
[2025-07-27 20:55:02] 2025-07-28 00:55:02,419 [wrapper] Test setup, not cleaning
[2025-07-27 20:55:02] 2025-07-28 00:55:02,427 [wrapper] apfmon messages muted
[2025-07-27 20:55:02] 2025-07-28 00:55:02,432 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:55:02] 2025-07-28 00:55:02,435 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:55:02]  *** Error codes and diagnostics ***
[2025-07-27 20:55:02]     "exeErrorCode": 0,
[2025-07-27 20:55:02]     "exeErrorDiag": "",
[2025-07-27 20:55:02]     "pilotErrorCode": 0,
[2025-07-27 20:55:02]     "pilotErrorDiag": "",
[2025-07-27 20:55:02]  *** Listing of results directory ***
[2025-07-27 20:55:02] total 357324
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 13:39 pilot3.tar.gz
[2025-07-27 20:55:02] -rwx------. 1 boincer umatlas     36292 Jul 27 14:02 runpilot2-wrapper.sh
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 14:02 queuedata.json
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas       100 Jul 27 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:55:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 19:31 run_atlas
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas       105 Jul 27 19:31 job.xml
[2025-07-27 20:55:02] -rw-r--r--. 2 boincer umatlas 146375909 Jul 27 19:31 EVNT.45743347._002918.pool.root.1
[2025-07-27 20:55:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:31 start_atlas.sh
[2025-07-27 20:55:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 19:31 shared
[2025-07-27 20:55:02] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 19:31 input.tar.gz
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas         0 Jul 27 19:31 boinc_lockfile
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 19:31 pandaJob.out
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas    980125 Jul 27 19:31 agis_schedconf.cvmfs.json
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas   1593052 Jul 27 19:31 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:55:02] drwx------. 4 boincer umatlas      4096 Jul 27 19:31 pilot3
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas      6947 Jul 27 20:48 init_data.xml
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas 214061810 Jul 27 20:53 HITS.45743349._053338.pool.root.1
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:53 boinc_task_state.xml
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas      1025 Jul 27 20:54 memory_monitor_summary.json
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas    310438 Jul 27 20:54 log.45743349._053338.job.log.tgz.1
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas      7771 Jul 27 20:54 heartbeat.json
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas        95 Jul 27 20:54 pilot_heartbeat.json
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:54 boinc_mmap_file
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:54 wrapper_checkpoint.txt
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas       893 Jul 27 20:55 pilotlog.txt
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas    483003 Jul 27 20:55 log.45743349._053338.job.log.1
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas       357 Jul 27 20:55 output.list
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:55 runtime_log
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas    808960 Jul 27 20:55 result.tar.gz
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas       650 Jul 27 20:55 S5NNDmasK07n9Rq4apOajLDm4fhM0noT9bVof3QYDmus2KDm02PrDm.diag
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas      8669 Jul 27 20:55 runtime_log.err
[2025-07-27 20:55:02] -rw-r--r--. 1 boincer umatlas     21948 Jul 27 20:55 stderr.txt
[2025-07-27 20:55:02] HITS file was successfully produced:
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas 214061810 Jul 27 20:53 shared/HITS.pool.root.1
[2025-07-27 20:55:02]  *** Contents of shared directory: ***
[2025-07-27 20:55:02] total 353344
[2025-07-27 20:55:02] -rw-r--r--. 2 boincer umatlas 146375909 Jul 27 19:31 ATLAS.root_0
[2025-07-27 20:55:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:31 start_atlas.sh
[2025-07-27 20:55:02] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 19:31 input.tar.gz
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas 214061810 Jul 27 20:53 HITS.pool.root.1
[2025-07-27 20:55:02] -rw-------. 1 boincer umatlas    808960 Jul 27 20:55 result.tar.gz
20:55:04 (1635574): run_atlas exited; CPU time 35565.165022
20:55:04 (1635574): called boinc_finish(0)

</stderr_txt>
]]>

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