Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-28 01:21:20 (97300): Detected: vboxwrapper 26206
2025-07-28 01:21:20 (97300): Detected: BOINC client v8.0.2
2025-07-28 01:21:21 (97300): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-07-28 01:21:21 (97300): Successfully copied 'init_data.xml' to the shared directory.
2025-07-28 01:21:22 (97300): Create VM. (boinc_a258515b34a25951, slot#0)
2025-07-28 01:21:22 (97300): Setting Memory Size for VM. (4800MB)
2025-07-28 01:21:23 (97300): Setting CPU Count for VM. (8)
2025-07-28 01:21:23 (97300): Setting Chipset Options for VM.
2025-07-28 01:21:23 (97300): Setting Graphics Controller Options for VM.
2025-07-28 01:21:24 (97300): Setting Boot Options for VM.
2025-07-28 01:21:24 (97300): Setting Network Configuration for NAT.
2025-07-28 01:21:24 (97300): Enabling VM Network Access.
2025-07-28 01:21:24 (97300): Disabling USB Support for VM.
2025-07-28 01:21:25 (97300): Disabling COM Port Support for VM.
2025-07-28 01:21:25 (97300): Disabling LPT Port Support for VM.
2025-07-28 01:21:25 (97300): Disabling Audio Support for VM.
2025-07-28 01:21:26 (97300): Disabling Clipboard Support for VM.
2025-07-28 01:21:26 (97300): Disabling Drag and Drop Support for VM.
2025-07-28 01:21:26 (97300): Adding storage controller(s) to VM.
2025-07-28 01:21:26 (97300): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-28 01:21:29 (97300): Adding VirtualBox Guest Additions to VM.
2025-07-28 01:21:30 (97300): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-28 01:21:30 (97300): forwarding host port 57638 to guest port 80
2025-07-28 01:21:30 (97300): Enabling remote desktop for VM.
2025-07-28 01:21:31 (97300): Enabling shared directory for VM.
2025-07-28 01:21:31 (97300): Starting VM using VBoxManage interface. (boinc_a258515b34a25951, slot#0)
2025-07-28 01:21:36 (97300): Successfully started VM. (PID = '65516')
2025-07-28 01:21:36 (97300): Reporting VM Process ID to BOINC.
2025-07-28 01:21:36 (97300): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-28 01:21:36 (97300): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 01:21:36 (97300): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 01:21:36 (97300): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 01:21:36 (97300): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 01:21:36 (97300): Detected: Web Application Enabled (http://localhost:57638)
2025-07-28 01:21:36 (97300): Detected: Remote Desktop Enabled (localhost:57649)
2025-07-28 01:21:36 (97300): Preference change detected
2025-07-28 01:21:36 (97300): Setting CPU throttle for VM. (100%)
2025-07-28 01:21:36 (97300): Setting network throttle for VM. (200KB)
2025-07-28 01:21:37 (97300): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 01:21:38 (97300): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 01:21:38 (97300): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 01:21:41 (97300): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 01:21:41 (97300): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 01:21:41 (97300): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 01:21:47 (97300): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 01:21:47 (97300): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 01:21:54 (97300): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.000116 main     Log opened 2025-07-28T01:21:52.636951000Z
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.000231 main     OS Product: Linux
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.000260 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.000286 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.000309 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.000309 main     Process ID: 1375
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.000310 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 01:21:54 (97300): Guest Log: 00:00:00.001336 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 01:21:54 (97300): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 01:21:54 (97300): Guest Log: [INFO] Mounting shared directory
2025-07-28 01:21:54 (97300): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 01:21:58 (97300): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 01:21:58 (97300): Guest Log: [INFO] Detected branch: prod
2025-07-28 01:21:58 (97300): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 01:21:58 (97300): Guest Log: Copying input files
2025-07-28 01:22:00 (97300): Guest Log: Copied input files into RunAtlas.
2025-07-28 01:22:00 (97300): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 01:22:00 (97300): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 01:22:00 (97300): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 01:22:00 (97300): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 01:22:04 (97300): Guest Log: 00:00:10.005682 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 698 774 000ns (GuestNow=1 753 658 523 940 848 000 ns GuestLast=1 753 665 712 639 622 000 ns fSetTimeLastLoop=true )
2025-07-28 01:22:09 (97300): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 01:22:09 (97300): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 01:22:09 (97300): Guest Log: 2.6.3.0 1650 0 30132 148828 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 01:22:11 (97300): Guest Log: copied the webapp to /var/www
2025-07-28 01:22:11 (97300): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-28 01:22:11 (97300): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-28 01:22:12 (97300): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 01:22:12 (97300): Guest Log:  *** Starting ATLAS job. (PandaID=6747578626 taskID=45743349) ***
2025-07-28 05:24:29 (97300): Guest Log: 02:12:38.128947 timesync vgsvcTimeSyncWorker: Radical host time change: 12 963 566 000 000ns (HostNow=1 753 673 068 125 000 000 ns HostLast=1 753 660 104 559 000 000 ns)
2025-07-28 05:24:29 (97300): Guest Log: 02:12:38.129100 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 367 495 274 000ns (GuestNow=1 753 666 472 054 084 000 ns GuestLast=1 753 660 104 558 810 000 ns fSetTimeLastLoop=false)
2025-07-28 05:24:39 (97300): Guest Log: 02:12:48.130087 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 606 081 282 000ns (GuestNow=1 753 673 078 135 366 000 ns GuestLast=1 753 666 472 054 084 000 ns fSetTimeLastLoop=true )
2025-07-28 06:03:38 (97300): Guest Log: 02:51:45.458924 timesync vgsvcTimeSyncWorker: Radical host time change: 2 219 056 000 000ns (HostNow=1 753 675 417 589 000 000 ns HostLast=1 753 673 198 533 000 000 ns)
2025-07-28 06:03:38 (97300): Guest Log: 02:51:45.458994 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 207 300 294 000ns (GuestNow=1 753 675 415 464 568 000 ns GuestLast=1 753 673 208 164 274 000 ns fSetTimeLastLoop=false)
2025-07-28 07:04:49 (97300): Status Report: Elapsed Time: '6000.000000'
2025-07-28 07:04:49 (97300): Status Report: CPU Time: '16975.984375'
2025-07-28 07:04:49 (97300): Status Report: Network Bytes Sent (Total): '1763961.000000'
2025-07-28 07:04:49 (97300): Status Report: Network Bytes Received (Total): '292550264.000000'
2025-07-28 08:05:35 (97300): Guest Log: 04:53:39.741517 timesync vgsvcTimeSyncWorker: Radical host time change: 2 251 943 000 000ns (HostNow=1 753 682 735 324 000 000 ns HostLast=1 753 680 483 381 000 000 ns)
2025-07-28 08:05:35 (97300): Guest Log: 04:53:39.741654 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 199 291 787 000ns (GuestNow=1 753 682 729 747 158 000 ns GuestLast=1 753 680 530 455 371 000 ns fSetTimeLastLoop=false)
2025-07-28 08:41:11 (22352): Detected: vboxwrapper 26206
2025-07-28 08:41:11 (22352): Detected: BOINC client v8.0.2
2025-07-28 08:41:12 (22352): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-07-28 08:41:13 (22352): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-28 08:41:13 (22352): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 08:41:13 (22352): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 08:41:13 (22352): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 08:41:13 (22352): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 08:41:13 (22352): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 08:41:13 (22352): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 08:41:13 (22352): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 08:41:13 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 08:41:13 (22352): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 08:41:13 (22352): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 08:41:13 (22352): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.000116 main     Log opened 2025-07-28T01:21:52.636951000Z
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.000231 main     OS Product: Linux
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.000260 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.000286 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.000309 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.000309 main     Process ID: 1375
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.000310 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 08:41:13 (22352): Guest Log: 00:00:00.001336 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 08:41:13 (22352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 08:41:13 (22352): Guest Log: [INFO] Mounting shared directory
2025-07-28 08:41:13 (22352): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 08:41:13 (22352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 08:41:13 (22352): Guest Log: [INFO] Detected branch: prod
2025-07-28 08:41:13 (22352): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 08:41:13 (22352): Guest Log: Copying input files
2025-07-28 08:41:13 (22352): Guest Log: Copied input files into RunAtlas.
2025-07-28 08:41:13 (22352): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 08:41:13 (22352): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 08:41:13 (22352): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 08:41:13 (22352): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 08:41:13 (22352): Guest Log: 00:00:10.005682 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 698 774 000ns (GuestNow=1 753 658 523 940 848 000 ns GuestLast=1 753 665 712 639 622 000 ns fSetTimeLastLoop=true )
2025-07-28 08:41:13 (22352): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 08:41:13 (22352): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 08:41:13 (22352): Guest Log: 2.6.3.0 1650 0 30132 148828 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 08:41:13 (22352): Guest Log: copied the webapp to /var/www
2025-07-28 08:41:13 (22352): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-28 08:41:13 (22352): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-28 08:41:13 (22352): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 08:41:13 (22352): Guest Log:  *** Starting ATLAS job. (PandaID=6747578626 taskID=45743349) ***
2025-07-28 08:41:13 (22352): Guest Log: 02:12:38.128947 timesync vgsvcTimeSyncWorker: Radical host time change: 12 963 566 000 000ns (HostNow=1 753 673 068 125 000 000 ns HostLast=1 753 660 104 559 000 000 ns)
2025-07-28 08:41:13 (22352): Guest Log: 02:12:38.129100 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 367 495 274 000ns (GuestNow=1 753 666 472 054 084 000 ns GuestLast=1 753 660 104 558 810 000 ns fSetTimeLastLoop=false)
2025-07-28 08:41:13 (22352): Guest Log: 02:12:48.130087 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 606 081 282 000ns (GuestNow=1 753 673 078 135 366 000 ns GuestLast=1 753 666 472 054 084 000 ns fSetTimeLastLoop=true )
2025-07-28 08:41:13 (22352): Guest Log: 02:51:45.458924 timesync vgsvcTimeSyncWorker: Radical host time change: 2 219 056 000 000ns (HostNow=1 753 675 417 589 000 000 ns HostLast=1 753 673 198 533 000 000 ns)
2025-07-28 08:41:13 (22352): Guest Log: 02:51:45.458994 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 207 300 294 000ns (GuestNow=1 753 675 415 464 568 000 ns GuestLast=1 753 673 208 164 274 000 ns fSetTimeLastLoop=false)
2025-07-28 08:41:13 (22352): Guest Log: 04:53:39.741517 timesync vgsvcTimeSyncWorker: Radical host time change: 2 251 943 000 000ns (HostNow=1 753 682 735 324 000 000 ns HostLast=1 753 680 483 381 000 000 ns)
2025-07-28 08:41:13 (22352): Guest Log: 04:53:39.741654 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 199 291 787 000ns (GuestNow=1 753 682 729 747 158 000 ns GuestLast=1 753 680 530 455 371 000 ns fSetTimeLastLoop=false)
2025-07-28 08:41:13 (22352): Starting VM using VBoxManage interface. (boinc_a258515b34a25951, slot#0)
2025-07-28 08:41:17 (22352): Successfully started VM. (PID = '21700')
2025-07-28 08:41:17 (22352): Reporting VM Process ID to BOINC.
2025-07-28 08:41:17 (22352): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-28 08:41:17 (22352): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 08:41:17 (22352): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 08:41:17 (22352): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 08:41:17 (22352): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 08:41:17 (22352): Detected: Web Application Enabled (http://localhost:57638)
2025-07-28 08:41:17 (22352): Detected: Remote Desktop Enabled (localhost:57649)
2025-07-28 08:41:17 (22352): Status Report: Elapsed Time: '10077.000000'
2025-07-28 08:41:17 (22352): Status Report: CPU Time: '17173.312500'
2025-07-28 08:41:17 (22352): Status Report: Network Bytes Sent (Total): '0.000000'
2025-07-28 08:41:17 (22352): Status Report: Network Bytes Received (Total): '0.000000'
2025-07-28 08:41:17 (22352): Preference change detected
2025-07-28 08:41:17 (22352): Setting CPU throttle for VM. (100%)
2025-07-28 08:41:18 (22352): Setting network throttle for VM. (200KB)
2025-07-28 08:41:18 (22352): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 08:41:19 (22352): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 08:41:19 (22352): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 08:41:22 (22352): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 08:41:22 (22352): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 08:41:22 (22352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 08:41:28 (22352): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 08:41:28 (22352): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 08:41:33 (22352): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000113 main     Log opened 2025-07-28T08:41:31.508351000Z
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000198 main     OS Product: Linux
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000217 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000232 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000247 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000247 main     Process ID: 1372
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000248 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 08:41:33 (22352): Guest Log: 00:00:00.000794 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 08:41:33 (22352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 08:41:33 (22352): Guest Log: [INFO] Mounting shared directory
2025-07-28 08:41:33 (22352): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 08:41:38 (22352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 08:41:38 (22352): Guest Log: [INFO] Detected branch: prod
2025-07-28 08:41:38 (22352): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 08:41:38 (22352): Guest Log: Copying input files
2025-07-28 08:41:39 (22352): Guest Log: Copied input files into RunAtlas.
2025-07-28 08:41:39 (22352): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 08:41:39 (22352): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 08:41:39 (22352): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 08:41:39 (22352): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 08:41:43 (22352): Guest Log: 00:00:10.003401 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 362 241 000ns (GuestNow=1 753 684 903 148 178 000 ns GuestLast=1 753 692 091 510 419 000 ns fSetTimeLastLoop=true )
2025-07-28 08:41:47 (22352): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 08:41:48 (22352): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 08:41:48 (22352): Guest Log: 2.6.3.0 1650 0 30140 148839 4 1 3867288 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 08:41:49 (22352): Guest Log: copied the webapp to /var/www
2025-07-28 08:41:49 (22352): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-28 08:41:49 (22352): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-28 08:41:49 (22352): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 08:41:49 (22352): Guest Log:  *** Starting ATLAS job. (PandaID=6747578626 taskID=45743349) ***
2025-07-28 10:21:38 (22352): Status Report: Elapsed Time: '16077.869448'
2025-07-28 10:21:38 (22352): Status Report: CPU Time: '49926.656250'
2025-07-28 10:21:38 (22352): Status Report: Network Bytes Sent (Total): '514200.000000'
2025-07-28 10:21:38 (22352): Status Report: Network Bytes Received (Total): '12369020.000000'
2025-07-28 12:38:15 (22352): Guest Log: 03:56:41.469605 timesync vgsvcTimeSyncWorker: Radical guest time change: 5 328 784 159 000ns (GuestNow=1 753 699 094 614 418 000 ns GuestLast=1 753 693 765 830 259 000 ns fSetTimeLastLoop=false)
2025-07-28 12:46:26 (22352): Guest Log:  *** Job finished ***
2025-07-28 12:46:26 (22352): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:12,945 | INFO     | all workflow threads have been joined
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:12,945 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:12,945 | INFO     | traces error code: 0
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:12,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,117 | INFO     | PID=5997 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,119 | INFO     | found 0 job(s) in 20 queues
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,119 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,119 | INFO     | [monitor] control thread has ended
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,215 [wrapper] ==== pilot stdout END ====
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,245 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,254 [wrapper] pilotpid: 5997
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,276 [wrapper] Pilot exit status: 0
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,361 [wrapper] pandaids: 6747578626
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,473 [wrapper] cleanup supervisor_pilot 29771 5998
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,491 [wrapper] Test setup, not cleaning
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,511 [wrapper] apfmon messages muted
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,530 [wrapper] ==== wrapper stdout END ====
2025-07-28 12:46:26 (22352): Guest Log: 2025-07-28 10:46:25,554 [wrapper] ==== wrapper stderr END ====
2025-07-28 12:46:26 (22352): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 12:46:26 (22352): Guest Log:     "exeErrorCode": 0,
2025-07-28 12:46:26 (22352): Guest Log:     "exeErrorDiag": "",
2025-07-28 12:46:26 (22352): Guest Log:     "pilotErrorCode": 0,
2025-07-28 12:46:26 (22352): Guest Log:     "pilotErrorDiag": "",
2025-07-28 12:46:26 (22352): Guest Log:  *** Listing of results directory ***
2025-07-28 12:46:26 (22352): Guest Log: total 214400
2025-07-28 12:46:26 (22352): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 17:39 pilot3.tar.gz
2025-07-28 12:46:26 (22352): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 18:02 queuedata.json
2025-07-28 12:46:26 (22352): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 18:04 runpilot2-wrapper.sh
2025-07-28 12:46:26 (22352): Guest Log: -rwxr-xr-x. 1 atlas atlas     12155 Jul 28 06:41 init_data.xml
2025-07-28 12:46:26 (22352): Guest Log: -rwxr-xr-x. 1 atlas atlas    542892 Jul 28 06:41 input.tar.gz
2025-07-28 12:46:26 (22352): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 28 06:41 start_atlas.sh
2025-07-28 12:46:26 (22352): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 28 06:41 EVNT.45743347._002917.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 12:46:26 (22352): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 28 06:41 pandaJob.out
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas    978460 Jul 28 06:42 agis_schedconf.cvmfs.json
2025-07-28 12:46:26 (22352): Guest Log: drwx------. 4 atlas atlas      4096 Jul 28 06:42 pilot3
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas 213585242 Jul 28 10:45 HITS.45743349._053316.pool.root.1
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas        97 Jul 28 10:45 pilot_heartbeat.json
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas      1022 Jul 28 10:45 memory_monitor_summary.json
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 28 10:45 agis_ddmendpoints.agis.ALL.json
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas    331677 Jul 28 10:45 log.45743349._053316.job.log.tgz.1
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas      7779 Jul 28 10:45 heartbeat.json
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas       744 Jul 28 10:46 pilotlog.txt
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas    749842 Jul 28 10:46 log.45743349._053316.job.log.1
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas       357 Jul 28 10:46 output.list
2025-07-28 12:46:26 (22352): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 28 10:46 runtime_log
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas   1095680 Jul 28 10:46 result.tar.gz
2025-07-28 12:46:26 (22352): Guest Log: -rw-r--r--. 1 atlas atlas      8569 Jul 28 10:46 runtime_log.err
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas       654 Jul 28 10:46 6eGNDmouK07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo2VLDmdythOo.diag
2025-07-28 12:46:26 (22352): Guest Log: Looking for outputfile HITS.45743349._053316.pool.root.1
2025-07-28 12:46:26 (22352): Guest Log: HITS file was successfully produced
2025-07-28 12:46:26 (22352): Guest Log: -rw-------. 1 atlas atlas 213585242 Jul 28 10:45 /home/atlas/RunAtlas/HITS.45743349._053316.pool.root.1
2025-07-28 12:46:28 (22352): Guest Log: Successfully finished the ATLAS job!
2025-07-28 12:46:28 (22352): Guest Log: Copying the results back to the shared directory!
2025-07-28 12:46:28 (22352): Guest Log:  *** Contents of shared directory: ***
2025-07-28 12:46:28 (22352): Guest Log: total 351580
2025-07-28 12:46:28 (22352): Guest Log: -rwxrwxrwx. 1 root root 144760620 Jul 27 23:21 ATLAS.root_0
2025-07-28 12:46:28 (22352): Guest Log: -rwxrwxrwx. 1 root root 213585242 Jul 28  2025 HITS.pool.root.1
2025-07-28 12:46:28 (22352): Guest Log: -rwxrwxrwx. 1 root root     12155 Jul 27 23:21 init_data.xml
2025-07-28 12:46:28 (22352): Guest Log: -rwxrwxrwx. 1 root root    542892 Jul 27 23:14 input.tar.gz
2025-07-28 12:46:28 (22352): Guest Log: -rwxrwxrwx. 1 root root   1095680 Jul 28  2025 result.tar.gz
2025-07-28 12:46:28 (22352): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 23:14 start_atlas.sh
2025-07-28 12:46:28 (22352): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 12:46:28 (22352): VM Completion File Detected.
2025-07-28 12:46:28 (22352): Powering off VM.
2025-07-28 12:46:29 (22352): Successfully stopped VM.
2025-07-28 12:46:29 (22352): Deregistering VM. (boinc_a258515b34a25951, slot#0)
2025-07-28 12:46:29 (22352): Removing network bandwidth throttle group from VM.
2025-07-28 12:46:30 (22352): Removing VM from VirtualBox.
12:46:35 (22352): called boinc_finish(0)

</stderr_txt>
]]>

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