Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-28 08:24:30 (10784): Detected: vboxwrapper 26206
2025-07-28 08:24:30 (10784): Detected: BOINC client v8.2.4
2025-07-28 08:24:30 (10784): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-07-28 08:24:30 (10784): Successfully copied 'init_data.xml' to the shared directory.
2025-07-28 08:24:31 (10784): Create VM. (boinc_17787f80063b2e79, slot#1)
2025-07-28 08:24:31 (10784): Setting Memory Size for VM. (4400MB)
2025-07-28 08:24:32 (10784): Setting CPU Count for VM. (4)
2025-07-28 08:24:32 (10784): Setting Chipset Options for VM.
2025-07-28 08:24:32 (10784): Setting Graphics Controller Options for VM.
2025-07-28 08:24:32 (10784): Setting Boot Options for VM.
2025-07-28 08:24:33 (10784): Setting Network Configuration for NAT.
2025-07-28 08:24:33 (10784): Enabling VM Network Access.
2025-07-28 08:24:33 (10784): Disabling USB Support for VM.
2025-07-28 08:24:34 (10784): Disabling COM Port Support for VM.
2025-07-28 08:24:34 (10784): Disabling LPT Port Support for VM.
2025-07-28 08:24:34 (10784): Disabling Audio Support for VM.
2025-07-28 08:24:34 (10784): Disabling Clipboard Support for VM.
2025-07-28 08:24:35 (10784): Disabling Drag and Drop Support for VM.
2025-07-28 08:24:35 (10784): Adding storage controller(s) to VM.
2025-07-28 08:24:35 (10784): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-28 08:24:36 (10784): Adding VirtualBox Guest Additions to VM.
2025-07-28 08:24:36 (10784): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-28 08:24:36 (10784): forwarding host port 58868 to guest port 80
2025-07-28 08:24:36 (10784): Enabling remote desktop for VM.
2025-07-28 08:24:37 (10784): Required extension pack not installed, remote desktop not enabled.
2025-07-28 08:24:37 (10784): Enabling shared directory for VM.
2025-07-28 08:24:37 (10784): Starting VM using VBoxManage interface. (boinc_17787f80063b2e79, slot#1)
2025-07-28 08:24:44 (10784): Successfully started VM. (PID = '12968')
2025-07-28 08:24:44 (10784): Reporting VM Process ID to BOINC.
2025-07-28 08:24:44 (10784): Guest Log: BIOS: VirtualBox 7.1.12
2025-07-28 08:24:44 (10784): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 08:24:44 (10784): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 08:24:44 (10784): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 08:24:44 (10784): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 08:24:44 (10784): Detected: Web Application Enabled (http://localhost:58868)
2025-07-28 08:24:44 (10784): Preference change detected
2025-07-28 08:24:44 (10784): Setting CPU throttle for VM. (100%)
2025-07-28 08:24:44 (10784): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 08:24:46 (10784): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 08:24:46 (10784): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 08:24:50 (10784): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 08:24:50 (10784): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 08:24:50 (10784): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 08:24:58 (10784): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 08:24:58 (10784): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 08:25:07 (10784): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.000189 main     Log opened 2025-07-28T08:25:05.990526000Z
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.000351 main     OS Product: Linux
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.000407 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.000512 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.000556 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.000557 main     Process ID: 1327
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.000558 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 08:25:07 (10784): Guest Log: 00:00:00.002072 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 08:25:08 (10784): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 08:25:08 (10784): Guest Log: [INFO] Mounting shared directory
2025-07-28 08:25:08 (10784): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 08:25:16 (10784): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 08:25:16 (10784): Guest Log: [INFO] Detected branch: prod
2025-07-28 08:25:17 (10784): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 08:25:17 (10784): Guest Log: Copying input files
2025-07-28 08:25:17 (10784): Guest Log: 00:00:10.004013 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 501 849 000ns (GuestNow=1 753 683 917 492 224 000 ns GuestLast=1 753 691 105 994 073 000 ns fSetTimeLastLoop=true )
2025-07-28 08:25:18 (10784): Guest Log: Copied input files into RunAtlas.
2025-07-28 08:25:18 (10784): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 08:25:18 (10784): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 08:25:18 (10784): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 08:25:18 (10784): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 08:25:29 (10784): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 08:25:30 (10784): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 08:25:30 (10784): Guest Log: 2.6.3.0 1606 0 32156 148839 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 08:25:31 (10784): Guest Log: copied the webapp to /var/www
2025-07-28 08:25:31 (10784): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-28 08:25:31 (10784): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-28 08:25:32 (10784): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 08:25:32 (10784): Guest Log:  *** Starting ATLAS job. (PandaID=6747578602 taskID=45743349) ***
2025-07-28 10:05:22 (10784): Status Report: Elapsed Time: '6000.379141'
2025-07-28 10:05:22 (10784): Status Report: CPU Time: '19542.718750'
2025-07-28 11:49:12 (10784): Status Report: Elapsed Time: '12000.438322'
2025-07-28 11:49:12 (10784): Status Report: CPU Time: '44191.031250'
2025-07-28 13:32:48 (10784): Status Report: Elapsed Time: '18001.425909'
2025-07-28 13:32:48 (10784): Status Report: CPU Time: '68745.843750'
2025-07-28 15:16:12 (10784): Status Report: Elapsed Time: '24002.128078'
2025-07-28 15:16:12 (10784): Status Report: CPU Time: '93251.390625'
2025-07-28 16:31:20 (10784): Guest Log:  *** Job finished ***
2025-07-28 16:31:20 (10784): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:30:56,304 | INFO     | all workflow threads have been joined
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:30:56,304 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:30:56,304 | INFO     | traces error code: 0
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:30:56,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:15,962 | INFO     | PID=5940 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:15,962 | INFO     | found 0 job(s) in 20 queues
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:15,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:15,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:15,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:15,963 | INFO     | [monitor] control thread has ended
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:16,112 [wrapper] ==== pilot stdout END ====
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:16,120 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:16,128 [wrapper] pilotpid: 5940
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:16,136 [wrapper] Pilot exit status: 0
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:18,875 [wrapper] pandaids: 6747578602
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:18,919 [wrapper] cleanup supervisor_pilot  3872 5941
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:18,930 [wrapper] Test setup, not cleaning
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:18,936 [wrapper] apfmon messages muted
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:18,942 [wrapper] ==== wrapper stdout END ====
2025-07-28 16:31:20 (10784): Guest Log: 2025-07-28 14:31:18,948 [wrapper] ==== wrapper stderr END ====
2025-07-28 16:31:20 (10784): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 16:31:20 (10784): Guest Log:     "exeErrorCode": 0,
2025-07-28 16:31:20 (10784): Guest Log:     "exeErrorDiag": "",
2025-07-28 16:31:20 (10784): Guest Log:     "pilotErrorCode": 0,
2025-07-28 16:31:20 (10784): Guest Log:     "pilotErrorDiag": "",
2025-07-28 16:31:20 (10784): Guest Log:  *** Listing of results directory ***
2025-07-28 16:31:20 (10784): Guest Log: total 219176
2025-07-28 16:31:20 (10784): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 17:39 pilot3.tar.gz
2025-07-28 16:31:20 (10784): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 18:02 queuedata.json
2025-07-28 16:31:20 (10784): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 18:04 runpilot2-wrapper.sh
2025-07-28 16:31:20 (10784): Guest Log: -rwxr-xr-x. 1 atlas atlas      8683 Jul 28 06:25 init_data.xml
2025-07-28 16:31:20 (10784): Guest Log: -rwxr-xr-x. 1 atlas atlas    542900 Jul 28 06:25 input.tar.gz
2025-07-28 16:31:20 (10784): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 28 06:25 start_atlas.sh
2025-07-28 16:31:20 (10784): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 28 06:25 EVNT.45743347._002916.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 16:31:20 (10784): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 28 06:25 pandaJob.out
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas    978460 Jul 28 06:28 agis_schedconf.cvmfs.json
2025-07-28 16:31:20 (10784): Guest Log: drwx------. 4 atlas atlas      4096 Jul 28 06:28 pilot3
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas 215077305 Jul 28 14:29 HITS.45743349._053304.pool.root.1
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas      1031 Jul 28 14:30 memory_monitor_summary.json
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas        95 Jul 28 14:30 pilot_heartbeat.json
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas   1589827 Jul 28 14:30 agis_ddmendpoints.agis.ALL.json
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas    441512 Jul 28 14:30 log.45743349._053304.job.log.tgz.1
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas      7786 Jul 28 14:30 heartbeat.json
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas       744 Jul 28 14:31 pilotlog.txt
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas   2333562 Jul 28 14:31 log.45743349._053304.job.log.1
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas       357 Jul 28 14:31 output.list
2025-07-28 16:31:20 (10784): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 28 14:31 runtime_log
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas   2795520 Jul 28 14:31 result.tar.gz
2025-07-28 16:31:20 (10784): Guest Log: -rw-r--r--. 1 atlas atlas      8596 Jul 28 14:31 runtime_log.err
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas       662 Jul 28 14:31 oG0MDmouK07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd2VLDm4siQrm.diag
2025-07-28 16:31:20 (10784): Guest Log: Looking for outputfile HITS.45743349._053304.pool.root.1
2025-07-28 16:31:20 (10784): Guest Log: HITS file was successfully produced
2025-07-28 16:31:20 (10784): Guest Log: -rw-------. 1 atlas atlas 215077305 Jul 28 14:29 /home/atlas/RunAtlas/HITS.45743349._053304.pool.root.1
2025-07-28 16:31:22 (10784): Guest Log: Successfully finished the ATLAS job!
2025-07-28 16:31:22 (10784): Guest Log: Copying the results back to the shared directory!
2025-07-28 16:31:22 (10784): Guest Log:  *** Contents of shared directory: ***
2025-07-28 16:31:22 (10784): Guest Log: total 354748
2025-07-28 16:31:22 (10784): Guest Log: -rwxrwxrwx. 1 root root 144805987 Jul 28 06:24 ATLAS.root_0
2025-07-28 16:31:22 (10784): Guest Log: -rwxrwxrwx. 1 root root 215077305 Jul 28 14:31 HITS.pool.root.1
2025-07-28 16:31:22 (10784): Guest Log: -rwxrwxrwx. 1 root root      8683 Jul 28 06:24 init_data.xml
2025-07-28 16:31:22 (10784): Guest Log: -rwxrwxrwx. 1 root root    542900 Jul 27 23:16 input.tar.gz
2025-07-28 16:31:22 (10784): Guest Log: -rwxrwxrwx. 1 root root   2795520 Jul 28 14:31 result.tar.gz
2025-07-28 16:31:22 (10784): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 23:16 start_atlas.sh
2025-07-28 16:31:22 (10784): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 16:31:22 (10784): VM Completion File Detected.
2025-07-28 16:31:22 (10784): Powering off VM.
2025-07-28 16:31:23 (10784): Successfully stopped VM.
2025-07-28 16:31:23 (10784): Deregistering VM. (boinc_17787f80063b2e79, slot#1)
2025-07-28 16:31:23 (10784): Removing network bandwidth throttle group from VM.
2025-07-28 16:31:23 (10784): Removing VM from VirtualBox.
16:31:29 (10784): called boinc_finish(0)

</stderr_txt>
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