Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:18:55 (3559931): wrapper (7.7.26015): starting
19:18:55 (3559931): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 19:18:55] Arguments: --nthreads 8
[2025-07-27 19:18:55] Threads: 8
[2025-07-27 19:18:55] Checking for CVMFS
[2025-07-27 19:18:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:18:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:18:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:18:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:18:56] 2.13.0.0 317867 27768 307236 148828 0 327 27191998 40960000 29102 16776704 3 206175063 99.622 249945342 29639 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 19:18:56] CVMFS is ok
[2025-07-27 19:18:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:18:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:18:56] Further information can be found at the LHC@home message board.
[2025-07-27 19:18:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:18:56] Checking for apptainer binary...
[2025-07-27 19:18:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:18:56] Running /usr/bin/apptainer --version
[2025-07-27 19:18:56] apptainer version 1.4.1-1.el9
[2025-07-27 19:18:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:18:56] c8-6-11.aglt2.org
[2025-07-27 19:18:56] apptainer works
[2025-07-27 19:18:56] Set ATHENA_PROC_NUMBER=8
[2025-07-27 19:18:56] Set ATHENA_CORE_NUMBER=8
[2025-07-27 19:18:56] Starting ATLAS job with PandaID=6747578518
[2025-07-27 19:18:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:28:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:28:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 20:28:56]  is_altstaged=None
[2025-07-27 20:28:56]  is_tar=False
[2025-07-27 20:28:56]  lfn=log.45743349._053262.job.log.tgz.1
[2025-07-27 20:28:56]  mtime=0
[2025-07-27 20:28:56]  protocol_id=None
[2025-07-27 20:28:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:28:56]  replicas=None
[2025-07-27 20:28:56]  scope=mc23_13p6TeV
[2025-07-27 20:28:56]  status=None
[2025-07-27 20:28:56]  status_code=0
[2025-07-27 20:28:56]  storage_token=
[2025-07-27 20:28:56]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6747578518/log.45743349._053262.job.log.tgz.1
[2025-07-27 20:28:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/e2/log.45743349._053262.job.log.tgz.1
[2025-07-27 20:28:56]  workdir=None
[2025-07-27 20:28:56] ]
[2025-07-27 20:28:56] 2025-07-28 00:28:17,886 | INFO     | transferring file log.45743349._053262.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6747578518/log.45743349._053262.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:28:56] 2025-07-28 00:28:17,886 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6747578518/log.45743349._053262.job.log.tgz.1 /tmp/boinchome/slots/3/log.45743349._053262.job
[2025-07-27 20:28:56] 2025-07-28 00:28:17,905 | INFO     | adding to output.list: log.45743349._053262.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/e2/log.45743349._053262.job.log.tg
[2025-07-27 20:28:56] 2025-07-28 00:28:17,906 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:28:56] 2025-07-28 00:28:17,906 | INFO     | summary of transferred files:
[2025-07-27 20:28:56] 2025-07-28 00:28:17,906 | INFO     |  -- lfn=log.45743349._053262.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:28:56] 2025-07-28 00:28:17,906 | INFO     | stage-out finished correctly
[2025-07-27 20:28:56] 2025-07-28 00:28:18,894 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:28:56] 2025-07-28 00:28:19,005 | INFO     | job 6747578518 has state=finished
[2025-07-27 20:28:56] 2025-07-28 00:28:19,005 | INFO     | preparing for final server update for job 6747578518 in state='finished'
[2025-07-27 20:28:56] 2025-07-28 00:28:19,005 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:28:56] 2025-07-28 00:28:19,005 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:28:56] 2025-07-28 00:28:19,005 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:28:56] 2025-07-28 00:28:19,006 | INFO     | job 6747578518 has finished - writing final server update
[2025-07-27 20:28:56] 2025-07-28 00:28:19,006 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:28:56] 2025-07-28 00:28:19,006 | INFO     | executing command: lscpu
[2025-07-27 20:28:56] 2025-07-28 00:28:19,073 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:28:56] 2025-07-28 00:28:19,351 | INFO     | monitor loop #295: job 0:6747578518 is in state 'finished'
[2025-07-27 20:28:56] 2025-07-28 00:28:19,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:28:56] 2025-07-28 00:28:21,855 | INFO     | monitor loop #296: job 0:6747578518 is in state 'finished'
[2025-07-27 20:28:56] 2025-07-28 00:28:21,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:28:56] 2025-07-28 00:28:23,920 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 20:28:56] 2025-07-28 00:28:23,925 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3711.809804687498
[2025-07-27 20:28:56] 2025-07-28 00:28:23,938 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6747578518/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:28:56] 2025-07-28 00:28:23,939 | INFO     | extracted standard info from prmon json
[2025-07-27 20:28:56] 2025-07-28 00:28:23,939 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:28:56] 2025-07-28 00:28:23,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:28:56] 2025-07-28 00:28:23,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:28:56] 2025-07-28 00:28:23,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:28:56] 2025-07-28 00:28:23,940 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | sum of square deviations: 70364110.0
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | sum of deviations: -1803182142.9999993
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | mean x: 1753660526.0
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | mean y: 2298900.5573770492
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | -- intersect: 44942387610.08822
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | intersect: 44942387610.08822
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | chi2: 0.018332290477712378
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | -- intersect: 44942387610.08822
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | current memory leak: -25.63 B/s (using 61 data points, chi2=0.02)
[2025-07-27 20:28:56] 2025-07-28 00:28:23,941 | INFO     | could have reported an average CPU frequency of 3725 MHz (6 samples)
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | ..............................
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . Timing measurements:
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . get job = 0 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . initial setup = 3 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . payload setup = 11 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . stage-in = 0 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . payload execution = 4110 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . stage-out = 0 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | . log creation = 0 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,942 | INFO     | ..............................
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | 
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | job summary report
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | --------------------------------------------------
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | PanDA job id: 6747578518
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | task id: 45743349
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | errors: (none)
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | pilot state: finished 
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | transexitcode: 0
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | exeerrorcode: 0
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | exeerrordiag: 
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | exitcode: 0
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | exitmsg: OK
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | cpuconsumptiontime: 28577 s
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | nevents: 400
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | neventsw: 0
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | pid: 3573387
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | pgrp: 3573387
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | corecount: 8
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | event service: False
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | sizes: {0: 2397475, 7: 2397737, 11: 2397765, 4125: 2423688, 4126: 2432686, 4127: 2432742, 4132: 2433064}
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | --------------------------------------------------
[2025-07-27 20:28:56] 2025-07-28 00:28:23,995 | INFO     | 
[2025-07-27 20:28:56] 2025-07-28 00:28:23,996 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-27 20:28:56] 2025-07-28 00:28:24,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | job 6747578518 has completed (purged errors)
[2025-07-27 20:28:56] 2025-07-28 00:28:24,019 | INFO     | overall cleanup function is called
[2025-07-27 20:28:56] 2025-07-28 00:28:25,027 | INFO     | --- collectZombieJob: --- 10, [3573387]
[2025-07-27 20:28:56] 2025-07-28 00:28:25,027 | INFO     | zombie collector waiting for pid 3573387
[2025-07-27 20:28:56] 2025-07-28 00:28:25,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:28:56] 2025-07-28 00:28:25,028 | INFO     | collected zombie processes
[2025-07-27 20:28:56] 2025-07-28 00:28:25,028 | INFO     | will attempt to kill all subprocesses of pid=3573387
[2025-07-27 20:28:56] 2025-07-28 00:28:25,405 | INFO     | process IDs to be killed: [3573387] (in reverse order)
[2025-07-27 20:28:56] 2025-07-28 00:28:25,559 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:28:56] 2025-07-28 00:28:25,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:28:56] 2025-07-28 00:28:25,583 | INFO     | did not find any defunct processes belonging to 3573387
[2025-07-27 20:28:56] 2025-07-28 00:28:25,606 | INFO     | did not find any defunct processes belonging to 3573387
[2025-07-27 20:28:56] 2025-07-28 00:28:25,607 | INFO     | ready for new job
[2025-07-27 20:28:56] 2025-07-28 00:28:25,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:28:56] 2025-07-28 00:28:25,608 | INFO     | ***************************************
[2025-07-27 20:28:56] 2025-07-28 00:28:25,609 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:28:56] 2025-07-28 00:28:25,609 | INFO     | ***************************************
[2025-07-27 20:28:56] 2025-07-28 00:28:25,609 | INFO     | 
[2025-07-27 20:28:56] 2025-07-28 00:28:25,627 | INFO     | architecture information:
[2025-07-27 20:28:56] 2025-07-28 00:28:25,628 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:28:56] 2025-07-28 00:28:25,645 | INFO     | cat /etc/os-release:
[2025-07-27 20:28:56] NAME="CentOS Linux"
[2025-07-27 20:28:56] VERSION="7 (Core)"
[2025-07-27 20:28:56] ID="centos"
[2025-07-27 20:28:56] ID_LIKE="rhel fedora"
[2025-07-27 20:28:56] VERSION_ID="7"
[2025-07-27 20:28:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:28:56] ANSI_COLOR="0;31"
[2025-07-27 20:28:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:28:56] HOME_URL="https://www.centos.org/"
[2025-07-27 20:28:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:28:56] 
[2025-07-27 20:28:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:28:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:28:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:28:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:28:56] 
[2025-07-27 20:28:56] 2025-07-28 00:28:25,645 | INFO     | ***************************************
[2025-07-27 20:28:56] 2025-07-28 00:28:26,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-27 20:28:56] 2025-07-28 00:28:26,167 | INFO     | sufficient remaining disk space (172309348352 B)
[2025-07-27 20:28:56] 2025-07-28 00:28:26,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:28:56] 2025-07-28 00:28:26,168 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:28:56] 2025-07-28 00:28:26,168 | INFO     | update_server=False
[2025-07-27 20:28:56] 2025-07-28 00:28:26,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:28:56] 2025-07-28 00:28:26,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:28:56] 2025-07-28 00:28:26,168 | INFO     | aborting loop
[2025-07-27 20:28:56] 2025-07-28 00:28:26,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:28:56] 2025-07-28 00:28:27,004 | INFO     | all data control threads have been joined
[2025-07-27 20:28:56] 2025-07-28 00:28:27,173 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:27,174 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:27,206 | INFO     | all payload control threads have been joined
[2025-07-27 20:28:56] 2025-07-28 00:28:27,311 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:27,313 | INFO     | all job control threads have been joined
[2025-07-27 20:28:56] 2025-07-28 00:28:27,814 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:27,972 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,009 | INFO     | [data] control thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,174 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,190 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,191 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,211 | INFO     | [payload] control thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,251 | INFO     | [job] validate thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,318 | INFO     | [job] control thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,331 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:28,361 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:29,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:28:56] 2025-07-28 00:28:29,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:28:56] 2025-07-28 00:28:30,011 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:33,463 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:28:56] 2025-07-28 00:28:35,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044629497664)>', '<ExcThread(monitor, started 140044270540544)>']
[2025-07-27 20:28:56] 2025-07-28 00:28:40,148 | INFO     | all workflow threads have been joined
[2025-07-27 20:28:56] 2025-07-28 00:28:40,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:28:56] 2025-07-28 00:28:40,148 | INFO     | traces error code: 0
[2025-07-27 20:28:56] 2025-07-28 00:28:40,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:28:56] 2025-07-28 00:28:55,932 | INFO     | PID=3563753 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:28:56] 2025-07-28 00:28:55,934 | INFO     | .. there are 22 such processes running
[2025-07-27 20:28:56] 2025-07-28 00:28:55,934 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:28:56] 2025-07-28 00:28:55,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:28:56] 2025-07-28 00:28:55,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:28:56] 2025-07-28 00:28:55,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:28:56] 2025-07-28 00:28:55,934 | INFO     | [monitor] control thread has ended
[2025-07-27 20:28:56] 2025-07-28 00:28:56,032 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:28:56] 2025-07-28 00:28:56,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:28:56] 2025-07-28 00:28:56,043 [wrapper] pilotpid: 3563753
[2025-07-27 20:28:56] 2025-07-28 00:28:56,046 [wrapper] Pilot exit status: 0
[2025-07-27 20:28:56] 2025-07-28 00:28:56,060 [wrapper] pandaids: 6747578518
[2025-07-27 20:28:56] 2025-07-28 00:28:56,162 [wrapper] cleanup supervisor_pilot 3865846 3563754
[2025-07-27 20:28:56] 2025-07-28 00:28:56,165 [wrapper] Test setup, not cleaning
[2025-07-27 20:28:56] 2025-07-28 00:28:56,168 [wrapper] apfmon messages muted
[2025-07-27 20:28:56] 2025-07-28 00:28:56,171 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:28:56] 2025-07-28 00:28:56,174 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:28:56]  *** Error codes and diagnostics ***
[2025-07-27 20:28:56]     "exeErrorCode": 0,
[2025-07-27 20:28:56]     "exeErrorDiag": "",
[2025-07-27 20:28:56]     "pilotErrorCode": 0,
[2025-07-27 20:28:56]     "pilotErrorDiag": "",
[2025-07-27 20:28:56]  *** Listing of results directory ***
[2025-07-27 20:28:56] total 363840
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 13:39 pilot3.tar.gz
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:58 queuedata.json
[2025-07-27 20:28:56] -rwx------. 1 boincer umatlas     36292 Jul 27 13:59 runpilot2-wrapper.sh
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas       100 Jul 27 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:28:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 19:18 run_atlas
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas       105 Jul 27 19:18 job.xml
[2025-07-27 20:28:56] -rw-r--r--. 2 boincer umatlas 151028435 Jul 27 19:18 EVNT.45743347._002913.pool.root.1
[2025-07-27 20:28:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:18 start_atlas.sh
[2025-07-27 20:28:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 19:18 shared
[2025-07-27 20:28:56] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 19:18 input.tar.gz
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas         0 Jul 27 19:18 boinc_lockfile
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 19:18 pandaJob.out
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas    980125 Jul 27 19:19 agis_schedconf.cvmfs.json
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas   1593052 Jul 27 19:19 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:28:56] drwx------. 4 boincer umatlas      4096 Jul 27 19:19 pilot3
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas      7161 Jul 27 20:27 init_data.xml
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:27 boinc_task_state.xml
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas 216238508 Jul 27 20:27 HITS.45743349._053262.pool.root.1
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas      1032 Jul 27 20:28 memory_monitor_summary.json
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas    301508 Jul 27 20:28 log.45743349._053262.job.log.tgz.1
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas        95 Jul 27 20:28 pilot_heartbeat.json
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas      7773 Jul 27 20:28 heartbeat.json
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:28 boinc_mmap_file
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:28 wrapper_checkpoint.txt
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas       823 Jul 27 20:28 pilotlog.txt
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas    412838 Jul 27 20:28 log.45743349._053262.job.log.1
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas       357 Jul 27 20:28 output.list
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:28 runtime_log
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas    737280 Jul 27 20:28 result.tar.gz
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 20:28 runtime_log.err
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas       652 Jul 27 20:28 ebBNDmUpK07n9Rq4apOajLDm4fhM0noT9bVof3QYDmSs2KDmIdBdTm.diag
[2025-07-27 20:28:56] -rw-r--r--. 1 boincer umatlas     21464 Jul 27 20:28 stderr.txt
[2025-07-27 20:28:56] HITS file was successfully produced:
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas 216238508 Jul 27 20:27 shared/HITS.pool.root.1
[2025-07-27 20:28:56]  *** Contents of shared directory: ***
[2025-07-27 20:28:56] total 359936
[2025-07-27 20:28:56] -rw-r--r--. 2 boincer umatlas 151028435 Jul 27 19:18 ATLAS.root_0
[2025-07-27 20:28:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:18 start_atlas.sh
[2025-07-27 20:28:56] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 19:18 input.tar.gz
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas 216238508 Jul 27 20:27 HITS.pool.root.1
[2025-07-27 20:28:56] -rw-------. 1 boincer umatlas    737280 Jul 27 20:28 result.tar.gz
20:28:57 (3559931): run_atlas exited; CPU time 28647.522642
20:28:57 (3559931): called boinc_finish(0)

</stderr_txt>
]]>

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