Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:17:55 (1154841): wrapper (7.7.26015): starting
19:17:55 (1154841): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 19:17:55] Arguments: --nthreads 8
[2025-07-27 19:17:55] Threads: 8
[2025-07-27 19:17:55] Checking for CVMFS
[2025-07-27 19:17:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:17:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:17:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:17:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:17:56] 2.12.6.0 24018 19031 228028 148828 1 142 26801260 32935937 15647 16776704 1 80083928 99.671 119873118 17961 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 19:17:56] CVMFS is ok
[2025-07-27 19:17:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:17:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:17:56] Further information can be found at the LHC@home message board.
[2025-07-27 19:17:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:17:56] Checking for apptainer binary...
[2025-07-27 19:17:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:17:56] Running /usr/bin/apptainer --version
[2025-07-27 19:17:56] apptainer version 1.4.1-1.el9
[2025-07-27 19:17:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:17:56] c7-2-16.aglt2.org
[2025-07-27 19:17:56] apptainer works
[2025-07-27 19:17:56] Set ATHENA_PROC_NUMBER=8
[2025-07-27 19:17:56] Set ATHENA_CORE_NUMBER=8
[2025-07-27 19:17:56] Starting ATLAS job with PandaID=6744922790
[2025-07-27 19:17:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:44:38]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:44:38]  replicas=None
[2025-07-27 20:44:38]  scope=mc23_13p6TeV
[2025-07-27 20:44:38]  status=None
[2025-07-27 20:44:38]  status_code=0
[2025-07-27 20:44:38]  storage_token=
[2025-07-27 20:44:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744922790/log.45743349._006835.job.log.tgz.1
[2025-07-27 20:44:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/1c/log.45743349._006835.job.log.tgz.1
[2025-07-27 20:44:38]  workdir=None
[2025-07-27 20:44:38] ]
[2025-07-27 20:44:38] 2025-07-28 00:43:56,258 | INFO     | transferring file log.45743349._006835.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744922790/log.45743349._006835.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:44:38] 2025-07-28 00:43:56,259 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744922790/log.45743349._006835.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._006835.job
[2025-07-27 20:44:38] 2025-07-28 00:43:56,282 | INFO     | adding to output.list: log.45743349._006835.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/1c/log.45743349._006835.job.log.tg
[2025-07-27 20:44:38] 2025-07-28 00:43:56,282 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:44:38] 2025-07-28 00:43:56,283 | INFO     | summary of transferred files:
[2025-07-27 20:44:38] 2025-07-28 00:43:56,283 | INFO     |  -- lfn=log.45743349._006835.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:44:38] 2025-07-28 00:43:56,283 | INFO     | stage-out finished correctly
[2025-07-27 20:44:38] 2025-07-28 00:43:56,415 | INFO     | monitor loop #369: job 0:6744922790 is in state 'finished'
[2025-07-27 20:44:38] 2025-07-28 00:43:56,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:44:38] 2025-07-28 00:43:58,686 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:44:38] 2025-07-28 00:43:58,920 | INFO     | monitor loop #370: job 0:6744922790 is in state 'finished'
[2025-07-27 20:44:38] 2025-07-28 00:43:58,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:44:38] 2025-07-28 00:44:00,046 | INFO     | job 6744922790 has state=finished
[2025-07-27 20:44:38] 2025-07-28 00:44:00,047 | INFO     | preparing for final server update for job 6744922790 in state='finished'
[2025-07-27 20:44:38] 2025-07-28 00:44:00,047 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:44:38] 2025-07-28 00:44:00,047 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:44:38] 2025-07-28 00:44:00,047 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:44:38] 2025-07-28 00:44:00,048 | INFO     | job 6744922790 has finished - writing final server update
[2025-07-27 20:44:38] 2025-07-28 00:44:00,048 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:44:38] 2025-07-28 00:44:00,049 | INFO     | executing command: lscpu
[2025-07-27 20:44:38] 2025-07-28 00:44:00,124 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:44:38] 2025-07-28 00:44:01,423 | INFO     | monitor loop #371: job 0:6744922790 is in state 'finished'
[2025-07-27 20:44:38] 2025-07-28 00:44:01,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:44:38] 2025-07-28 00:44:03,927 | INFO     | monitor loop #372: job 0:6744922790 is in state 'finished'
[2025-07-27 20:44:38] 2025-07-28 00:44:03,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:44:38] 2025-07-28 00:44:06,192 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:44:38] 2025-07-28 00:44:06,201 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3022.107520833333
[2025-07-27 20:44:38] 2025-07-28 00:44:06,216 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744922790/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:44:38] 2025-07-28 00:44:06,217 | INFO     | extracted standard info from prmon json
[2025-07-27 20:44:38] 2025-07-28 00:44:06,217 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:44:38] 2025-07-28 00:44:06,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:44:38] 2025-07-28 00:44:06,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:44:38] 2025-07-28 00:44:06,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | sum of square deviations: 141539398.0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | sum of deviations: -8747117204.0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | mean x: 1753660953.0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | mean y: 2393270.116883117
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | -- intersect: 108378422197.1958
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | intersect: 108378422197.1958
[2025-07-27 20:44:38] 2025-07-28 00:44:06,219 | INFO     | chi2: 0.044706462569757986
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | -- intersect: 108378422197.1958
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | current memory leak: -61.80 B/s (using 77 data points, chi2=0.04)
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | could have reported an average CPU frequency of 3029 MHz (6 samples)
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | ..............................
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . Timing measurements:
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . get job = 0 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . initial setup = 3 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . payload setup = 11 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . stage-in = 0 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . payload execution = 5108 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . stage-out = 0 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | . log creation = 0 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,220 | INFO     | ..............................
[2025-07-27 20:44:38] 2025-07-28 00:44:06,287 | INFO     | 
[2025-07-27 20:44:38] 2025-07-28 00:44:06,287 | INFO     | job summary report
[2025-07-27 20:44:38] 2025-07-28 00:44:06,287 | INFO     | --------------------------------------------------
[2025-07-27 20:44:38] 2025-07-28 00:44:06,287 | INFO     | PanDA job id: 6744922790
[2025-07-27 20:44:38] 2025-07-28 00:44:06,287 | INFO     | task id: 45743349
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | errors: (none)
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | pilot state: finished 
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | transexitcode: 0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | exeerrorcode: 0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | exeerrordiag: 
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | exitcode: 0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,288 | INFO     | exitmsg: OK
[2025-07-27 20:44:38] 2025-07-28 00:44:06,289 | INFO     | cpuconsumptiontime: 37766 s
[2025-07-27 20:44:38] 2025-07-28 00:44:06,289 | INFO     | nevents: 400
[2025-07-27 20:44:38] 2025-07-28 00:44:06,289 | INFO     | neventsw: 0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,289 | INFO     | pid: 1166093
[2025-07-27 20:44:38] 2025-07-28 00:44:06,289 | INFO     | pgrp: 1166093
[2025-07-27 20:44:38] 2025-07-28 00:44:06,289 | INFO     | corecount: 8
[2025-07-27 20:44:38] 2025-07-28 00:44:06,290 | INFO     | event service: False
[2025-07-27 20:44:38] 2025-07-28 00:44:06,290 | INFO     | sizes: {0: 2397236, 1: 2397491, 8: 2397753, 12: 2397781, 5122: 2424056, 5123: 2424055, 5124: 2433237, 5127: 2433293, 5134: 2433487}
[2025-07-27 20:44:38] 2025-07-28 00:44:06,290 | INFO     | --------------------------------------------------
[2025-07-27 20:44:38] 2025-07-28 00:44:06,290 | INFO     | 
[2025-07-27 20:44:38] 2025-07-28 00:44:06,290 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:44:38] 2025-07-28 00:44:06,317 | INFO     | job 6744922790 has completed (purged errors)
[2025-07-27 20:44:38] 2025-07-28 00:44:06,318 | INFO     | overall cleanup function is called
[2025-07-27 20:44:38] 2025-07-28 00:44:07,326 | INFO     | --- collectZombieJob: --- 10, [1166093]
[2025-07-27 20:44:38] 2025-07-28 00:44:07,326 | INFO     | zombie collector waiting for pid 1166093
[2025-07-27 20:44:38] 2025-07-28 00:44:07,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:44:38] 2025-07-28 00:44:07,326 | INFO     | collected zombie processes
[2025-07-27 20:44:38] 2025-07-28 00:44:07,326 | INFO     | will attempt to kill all subprocesses of pid=1166093
[2025-07-27 20:44:38] 2025-07-28 00:44:07,717 | INFO     | process IDs to be killed: [1166093] (in reverse order)
[2025-07-27 20:44:38] 2025-07-28 00:44:07,855 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:44:38] 2025-07-28 00:44:07,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:44:38] 2025-07-28 00:44:07,873 | INFO     | did not find any defunct processes belonging to 1166093
[2025-07-27 20:44:38] 2025-07-28 00:44:07,891 | INFO     | did not find any defunct processes belonging to 1166093
[2025-07-27 20:44:38] 2025-07-28 00:44:07,891 | INFO     | ready for new job
[2025-07-27 20:44:38] 2025-07-28 00:44:07,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:44:38] 2025-07-28 00:44:07,893 | INFO     | ***************************************
[2025-07-27 20:44:38] 2025-07-28 00:44:07,893 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:44:38] 2025-07-28 00:44:07,894 | INFO     | ***************************************
[2025-07-27 20:44:38] 2025-07-28 00:44:07,894 | INFO     | 
[2025-07-27 20:44:38] 2025-07-28 00:44:07,911 | INFO     | architecture information:
[2025-07-27 20:44:38] 2025-07-28 00:44:07,911 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:44:38] 2025-07-28 00:44:07,931 | INFO     | cat /etc/os-release:
[2025-07-27 20:44:38] NAME="CentOS Linux"
[2025-07-27 20:44:38] VERSION="7 (Core)"
[2025-07-27 20:44:38] ID="centos"
[2025-07-27 20:44:38] ID_LIKE="rhel fedora"
[2025-07-27 20:44:38] VERSION_ID="7"
[2025-07-27 20:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:44:38] ANSI_COLOR="0;31"
[2025-07-27 20:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:44:38] HOME_URL="https://www.centos.org/"
[2025-07-27 20:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:44:38] 
[2025-07-27 20:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:44:38] 
[2025-07-27 20:44:38] 2025-07-28 00:44:07,931 | INFO     | ***************************************
[2025-07-27 20:44:38] 2025-07-28 00:44:08,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:44:38] 2025-07-28 00:44:08,453 | INFO     | sufficient remaining disk space (75712430080 B)
[2025-07-27 20:44:38] 2025-07-28 00:44:08,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:44:38] 2025-07-28 00:44:08,453 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:44:38] 2025-07-28 00:44:08,453 | INFO     | update_server=False
[2025-07-27 20:44:38] 2025-07-28 00:44:08,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:44:38] 2025-07-28 00:44:08,742 | INFO     | all payload control threads have been joined
[2025-07-27 20:44:38] 2025-07-28 00:44:08,940 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:44:38] 2025-07-28 00:44:08,941 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:44:38] 2025-07-28 00:44:08,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:44:38] 2025-07-28 00:44:08,941 | INFO     | will abort loop
[2025-07-27 20:44:38] 2025-07-28 00:44:08,967 | INFO     | all job control threads have been joined
[2025-07-27 20:44:38] 2025-07-28 00:44:09,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:44:38] 2025-07-28 00:44:09,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:44:38] 2025-07-28 00:44:09,448 | INFO     | all data control threads have been joined
[2025-07-27 20:44:38] 2025-07-28 00:44:09,459 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:09,719 | INFO     | [job] validate thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:09,748 | INFO     | [payload] control thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:09,946 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:09,972 | INFO     | [job] control thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:09,986 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:10,015 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:10,349 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:10,352 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:10,442 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:10,454 | INFO     | [data] control thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:10,500 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:11,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:44:38] 2025-07-28 00:44:11,370 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:12,304 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:13,270 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:19,070 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:44:38] 2025-07-28 00:44:20,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:44:38] 2025-07-28 00:44:20,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275325220672)>', '<ExcThread(monitor, started 140274705626880)>']
[2025-07-27 20:44:38] 2025-07-28 00:44:25,345 | INFO     | all workflow threads have been joined
[2025-07-27 20:44:38] 2025-07-28 00:44:25,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:44:38] 2025-07-28 00:44:25,345 | INFO     | traces error code: 0
[2025-07-27 20:44:38] 2025-07-28 00:44:25,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:44:38] 2025-07-28 00:44:38,335 | INFO     | PID=1159540 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:44:38] 2025-07-28 00:44:38,337 | INFO     | .. there are 15 such processes running
[2025-07-27 20:44:38] 2025-07-28 00:44:38,337 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:44:38] 2025-07-28 00:44:38,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:44:38] 2025-07-28 00:44:38,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:44:38] 2025-07-28 00:44:38,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:44:38] 2025-07-28 00:44:38,338 | INFO     | [monitor] control thread has ended
[2025-07-27 20:44:38] 2025-07-28 00:44:38,463 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:44:38] 2025-07-28 00:44:38,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:44:38] 2025-07-28 00:44:38,472 [wrapper] pilotpid: 1159540
[2025-07-27 20:44:38] 2025-07-28 00:44:38,475 [wrapper] Pilot exit status: 0
[2025-07-27 20:44:38] 2025-07-28 00:44:38,491 [wrapper] pandaids: 6744922790
[2025-07-27 20:44:38] 2025-07-28 00:44:38,589 [wrapper] cleanup supervisor_pilot 1416137 1159541
[2025-07-27 20:44:38] 2025-07-28 00:44:38,593 [wrapper] Test setup, not cleaning
[2025-07-27 20:44:38] 2025-07-28 00:44:38,597 [wrapper] apfmon messages muted
[2025-07-27 20:44:38] 2025-07-28 00:44:38,603 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:44:38] 2025-07-28 00:44:38,607 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:44:38]  *** Error codes and diagnostics ***
[2025-07-27 20:44:38]     "exeErrorCode": 0,
[2025-07-27 20:44:38]     "exeErrorDiag": "",
[2025-07-27 20:44:38]     "pilotErrorCode": 0,
[2025-07-27 20:44:38]     "pilotErrorDiag": "",
[2025-07-27 20:44:38]  *** Listing of results directory ***
[2025-07-27 20:44:38] total 361956
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 14:26 pilot3.tar.gz
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 14:53 queuedata.json
[2025-07-27 20:44:38] -rwx------. 1 boincer umatlas     36292 Jul 24 14:53 runpilot2-wrapper.sh
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas       100 Jul 27 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:44:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 19:17 run_atlas
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas       105 Jul 27 19:17 job.xml
[2025-07-27 20:44:38] -rw-r--r--. 2 boincer umatlas 148637804 Jul 27 19:17 EVNT.45743347._000357.pool.root.1
[2025-07-27 20:44:38] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 19:17 input.tar.gz
[2025-07-27 20:44:38] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:17 start_atlas.sh
[2025-07-27 20:44:38] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 19:17 shared
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas         0 Jul 27 19:17 boinc_lockfile
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas      2557 Jul 27 19:17 pandaJob.out
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas    980125 Jul 27 19:18 agis_schedconf.cvmfs.json
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas   1593052 Jul 27 19:18 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:44:38] drwx------. 4 boincer umatlas      4096 Jul 27 19:18 pilot3
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas      6930 Jul 27 20:38 init_data.xml
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas 216539910 Jul 27 20:43 HITS.45743349._006835.pool.root.1
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:43 boinc_task_state.xml
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas        95 Jul 27 20:43 pilot_heartbeat.json
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas      1036 Jul 27 20:43 memory_monitor_summary.json
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas    295449 Jul 27 20:43 log.45743349._006835.job.log.tgz.1
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas      7781 Jul 27 20:44 heartbeat.json
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:44 wrapper_checkpoint.txt
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:44 boinc_mmap_file
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas       823 Jul 27 20:44 pilotlog.txt
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas    497182 Jul 27 20:44 log.45743349._006835.job.log.1
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas       357 Jul 27 20:44 output.list
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:44 runtime_log
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas    808960 Jul 27 20:44 result.tar.gz
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 20:44 runtime_log.err
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas       654 Jul 27 20:44 mpwMDmaFGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5CNLDmnZIPEn.diag
[2025-07-27 20:44:38] -rw-r--r--. 1 boincer umatlas     21883 Jul 27 20:44 stderr.txt
[2025-07-27 20:44:38] HITS file was successfully produced:
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas 216539910 Jul 27 20:43 shared/HITS.pool.root.1
[2025-07-27 20:44:38]  *** Contents of shared directory: ***
[2025-07-27 20:44:38] total 357972
[2025-07-27 20:44:38] -rw-r--r--. 2 boincer umatlas 148637804 Jul 27 19:17 ATLAS.root_0
[2025-07-27 20:44:38] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 19:17 input.tar.gz
[2025-07-27 20:44:38] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:17 start_atlas.sh
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas 216539910 Jul 27 20:43 HITS.pool.root.1
[2025-07-27 20:44:38] -rw-------. 1 boincer umatlas    808960 Jul 27 20:44 result.tar.gz
20:44:40 (1154841): run_atlas exited; CPU time 37942.307434
20:44:40 (1154841): called boinc_finish(0)

</stderr_txt>
]]>

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