Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:10 (24534): wrapper (7.7.26015): starting
19:01:10 (24534): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 19:01:10] Arguments: --nthreads 12
[2025-07-27 19:01:10] Threads: 12
[2025-07-27 19:01:10] Checking for CVMFS
[2025-07-27 19:01:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:01:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:01:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:01:11] 2.11.2.0 2979 112635 102952 148827 0 59 15892768 20275200 1 130560 0 38675531 99.971 9537806 10588 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:01:11] CVMFS is ok
[2025-07-27 19:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:01:11] Further information can be found at the LHC@home message board.
[2025-07-27 19:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:01:11] Checking for apptainer binary...
[2025-07-27 19:01:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:01:11] Running /usr/bin/apptainer --version
[2025-07-27 19:01:11] apptainer version 1.3.2-1.el7
[2025-07-27 19:01:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:01:12] c-205-7.aglt2.org
[2025-07-27 19:01:12] apptainer works
[2025-07-27 19:01:12] Set ATHENA_PROC_NUMBER=12
[2025-07-27 19:01:12] Set ATHENA_CORE_NUMBER=12
[2025-07-27 19:01:12] Starting ATLAS job with PandaID=6747413815
[2025-07-27 19:01:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:24:35]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:24:35]  protocol_id=None
[2025-07-27 20:24:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:24:35]  replicas=None
[2025-07-27 20:24:35]  scope=mc23_13p6TeV
[2025-07-27 20:24:35]  status=None
[2025-07-27 20:24:35]  status_code=0
[2025-07-27 20:24:35]  storage_token=
[2025-07-27 20:24:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747413815/log.45743349._050241.job.log.tgz.1
[2025-07-27 20:24:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/36/log.45743349._050241.job.log.tgz.1
[2025-07-27 20:24:35]  workdir=None
[2025-07-27 20:24:35] ]
[2025-07-27 20:24:35] 2025-07-28 00:23:54,097 | INFO     | transferring file log.45743349._050241.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747413815/log.45743349._050241.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:24:35] 2025-07-28 00:23:54,097 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747413815/log.45743349._050241.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._050241.job
[2025-07-27 20:24:35] 2025-07-28 00:23:54,120 | INFO     | adding to output.list: log.45743349._050241.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/36/log.45743349._050241.job.log.tg
[2025-07-27 20:24:35] 2025-07-28 00:23:54,121 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:24:35] 2025-07-28 00:23:54,121 | INFO     | summary of transferred files:
[2025-07-27 20:24:35] 2025-07-28 00:23:54,121 | INFO     |  -- lfn=log.45743349._050241.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:24:35] 2025-07-28 00:23:54,121 | INFO     | stage-out finished correctly
[2025-07-27 20:24:35] 2025-07-28 00:23:54,567 | INFO     | PID=28175 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:24:35] 2025-07-28 00:23:55,915 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:24:35] 2025-07-28 00:23:56,259 | WARNING  | process 2267 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 20:24:35] 2025-07-28 00:23:56,260 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747413815/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:24:35] 2025-07-28 00:23:56,346 | INFO     | number of running child processes to parent process 2267: 1
[2025-07-27 20:24:35] 2025-07-28 00:23:56,346 | INFO     | maximum number of monitored processes: 6
[2025-07-27 20:24:35] 2025-07-28 00:23:58,085 | INFO     | job 6747413815 has state=finished
[2025-07-27 20:24:35] 2025-07-28 00:23:58,086 | INFO     | preparing for final server update for job 6747413815 in state='finished'
[2025-07-27 20:24:35] 2025-07-28 00:23:58,086 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:24:35] 2025-07-28 00:23:58,086 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:24:35] 2025-07-28 00:23:58,086 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:24:35] 2025-07-28 00:23:58,087 | INFO     | job 6747413815 has finished - writing final server update
[2025-07-27 20:24:35] 2025-07-28 00:23:58,087 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:24:35] 2025-07-28 00:23:58,088 | INFO     | executing command: lscpu
[2025-07-27 20:24:35] 2025-07-28 00:23:58,124 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:24:35] 2025-07-28 00:23:58,849 | INFO     | monitor loop #369: job 0:6747413815 is in state 'finished'
[2025-07-27 20:24:35] 2025-07-28 00:23:58,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:24:35] 2025-07-28 00:24:01,353 | INFO     | monitor loop #370: job 0:6747413815 is in state 'finished'
[2025-07-27 20:24:35] 2025-07-28 00:24:01,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:24:35] 2025-07-28 00:24:03,128 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 20:24:35] 2025-07-28 00:24:03,132 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-07-27 20:24:35] 2025-07-28 00:24:03,135 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747413815/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:24:35] 2025-07-28 00:24:03,136 | INFO     | extracted standard info from prmon json
[2025-07-27 20:24:35] 2025-07-28 00:24:03,136 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:24:35] 2025-07-28 00:24:03,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:24:35] 2025-07-28 00:24:03,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:24:35] 2025-07-28 00:24:03,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:24:35] 2025-07-28 00:24:03,138 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:24:35] 2025-07-28 00:24:03,138 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 20:24:35] 2025-07-28 00:24:03,139 | INFO     | sum of deviations: -2700972030.000002
[2025-07-27 20:24:35] 2025-07-28 00:24:03,139 | INFO     | mean x: 1753659848.5
[2025-07-27 20:24:35] 2025-07-28 00:24:03,139 | INFO     | mean y: 2699165.4324324327
[2025-07-27 20:24:35] 2025-07-28 00:24:03,139 | INFO     | -- intersect: 37705288546.9721
[2025-07-27 20:24:35] 2025-07-28 00:24:03,139 | INFO     | intersect: 37705288546.9721
[2025-07-27 20:24:35] 2025-07-28 00:24:03,139 | INFO     | chi2: 0.03781401332185758
[2025-07-27 20:24:35] 2025-07-28 00:24:03,140 | INFO     | -- intersect: 37705288546.9721
[2025-07-27 20:24:35] 2025-07-28 00:24:03,140 | INFO     | current memory leak: -21.50 B/s (using 74 data points, chi2=0.04)
[2025-07-27 20:24:35] 2025-07-28 00:24:03,140 | INFO     | could have reported an average CPU frequency of 2045 MHz (6 samples)
[2025-07-27 20:24:35] 2025-07-28 00:24:03,140 | INFO     | ..............................
[2025-07-27 20:24:35] 2025-07-28 00:24:03,140 | INFO     | . Timing measurements:
[2025-07-27 20:24:35] 2025-07-28 00:24:03,140 | INFO     | . get job = 0 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,140 | INFO     | . initial setup = 2 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,141 | INFO     | . payload setup = 9 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,141 | INFO     | . stage-in = 0 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,141 | INFO     | . payload execution = 4918 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,141 | INFO     | . stage-out = 0 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,141 | INFO     | . log creation = 0 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,141 | INFO     | ..............................
[2025-07-27 20:24:35] 2025-07-28 00:24:03,225 | INFO     | 
[2025-07-27 20:24:35] 2025-07-28 00:24:03,225 | INFO     | job summary report
[2025-07-27 20:24:35] 2025-07-28 00:24:03,225 | INFO     | --------------------------------------------------
[2025-07-27 20:24:35] 2025-07-28 00:24:03,225 | INFO     | PanDA job id: 6747413815
[2025-07-27 20:24:35] 2025-07-28 00:24:03,226 | INFO     | task id: 45743349
[2025-07-27 20:24:35] 2025-07-28 00:24:03,226 | INFO     | errors: (none)
[2025-07-27 20:24:35] 2025-07-28 00:24:03,226 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:24:35] 2025-07-28 00:24:03,226 | INFO     | pilot state: finished 
[2025-07-27 20:24:35] 2025-07-28 00:24:03,226 | INFO     | transexitcode: 0
[2025-07-27 20:24:35] 2025-07-28 00:24:03,227 | INFO     | exeerrorcode: 0
[2025-07-27 20:24:35] 2025-07-28 00:24:03,227 | INFO     | exeerrordiag: 
[2025-07-27 20:24:35] 2025-07-28 00:24:03,227 | INFO     | exitcode: 0
[2025-07-27 20:24:35] 2025-07-28 00:24:03,227 | INFO     | exitmsg: OK
[2025-07-27 20:24:35] 2025-07-28 00:24:03,227 | INFO     | cpuconsumptiontime: 53915 s
[2025-07-27 20:24:35] 2025-07-28 00:24:03,227 | INFO     | nevents: 400
[2025-07-27 20:24:35] 2025-07-28 00:24:03,227 | INFO     | neventsw: 0
[2025-07-27 20:24:35] 2025-07-28 00:24:03,228 | INFO     | pid: 2267
[2025-07-27 20:24:35] 2025-07-28 00:24:03,228 | INFO     | pgrp: 2267
[2025-07-27 20:24:35] 2025-07-28 00:24:03,228 | INFO     | corecount: 12
[2025-07-27 20:24:35] 2025-07-28 00:24:03,228 | INFO     | event service: False
[2025-07-27 20:24:35] 2025-07-28 00:24:03,228 | INFO     | sizes: {0: 2397248, 1: 2397503, 6: 2397765, 12: 2397793, 4931: 2424209, 4932: 2433207, 4934: 2433391, 4941: 2433585}
[2025-07-27 20:24:35] 2025-07-28 00:24:03,228 | INFO     | --------------------------------------------------
[2025-07-27 20:24:35] 2025-07-28 00:24:03,229 | INFO     | 
[2025-07-27 20:24:35] 2025-07-28 00:24:03,229 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:24:35] 2025-07-28 00:24:03,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:24:35] 2025-07-28 00:24:03,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:24:35] 2025-07-28 00:24:03,257 | INFO     | job 6747413815 has completed (purged errors)
[2025-07-27 20:24:35] 2025-07-28 00:24:03,257 | INFO     | overall cleanup function is called
[2025-07-27 20:24:35] 2025-07-28 00:24:04,265 | INFO     | --- collectZombieJob: --- 10, [2267]
[2025-07-27 20:24:35] 2025-07-28 00:24:04,265 | INFO     | zombie collector waiting for pid 2267
[2025-07-27 20:24:35] 2025-07-28 00:24:04,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:24:35] 2025-07-28 00:24:04,265 | INFO     | collected zombie processes
[2025-07-27 20:24:35] 2025-07-28 00:24:04,265 | INFO     | will attempt to kill all subprocesses of pid=2267
[2025-07-27 20:24:35] 2025-07-28 00:24:04,359 | INFO     | process IDs to be killed: [2267] (in reverse order)
[2025-07-27 20:24:35] 2025-07-28 00:24:04,409 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:24:35] 2025-07-28 00:24:04,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:24:35] 2025-07-28 00:24:04,414 | INFO     | did not find any defunct processes belonging to 2267
[2025-07-27 20:24:35] 2025-07-28 00:24:04,417 | INFO     | did not find any defunct processes belonging to 2267
[2025-07-27 20:24:35] 2025-07-28 00:24:04,417 | INFO     | ready for new job
[2025-07-27 20:24:35] 2025-07-28 00:24:04,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:24:35] 2025-07-28 00:24:04,418 | INFO     | ***************************************
[2025-07-27 20:24:35] 2025-07-28 00:24:04,418 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:24:35] 2025-07-28 00:24:04,418 | INFO     | ***************************************
[2025-07-27 20:24:35] 2025-07-28 00:24:04,419 | INFO     | 
[2025-07-27 20:24:35] 2025-07-28 00:24:04,419 | INFO     | architecture information:
[2025-07-27 20:24:35] 2025-07-28 00:24:04,420 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:24:35] 2025-07-28 00:24:04,434 | INFO     | cat /etc/os-release:
[2025-07-27 20:24:35] NAME="CentOS Linux"
[2025-07-27 20:24:35] VERSION="7 (Core)"
[2025-07-27 20:24:35] ID="centos"
[2025-07-27 20:24:35] ID_LIKE="rhel fedora"
[2025-07-27 20:24:35] VERSION_ID="7"
[2025-07-27 20:24:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:24:35] ANSI_COLOR="0;31"
[2025-07-27 20:24:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:24:35] HOME_URL="https://www.centos.org/"
[2025-07-27 20:24:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:24:35] 
[2025-07-27 20:24:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:24:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:24:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:24:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:24:35] 
[2025-07-27 20:24:35] 2025-07-28 00:24:04,434 | INFO     | ***************************************
[2025-07-27 20:24:35] 2025-07-28 00:24:04,937 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:24:35] 2025-07-28 00:24:04,955 | INFO     | sufficient remaining disk space (29510074368 B)
[2025-07-27 20:24:35] 2025-07-28 00:24:04,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:24:35] 2025-07-28 00:24:04,956 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:24:35] 2025-07-28 00:24:04,956 | INFO     | update_server=False
[2025-07-27 20:24:35] 2025-07-28 00:24:04,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:24:35] 2025-07-28 00:24:04,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:24:35] 2025-07-28 00:24:04,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:24:35] 2025-07-28 00:24:04,957 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:24:35] 2025-07-28 00:24:04,957 | INFO     | aborting loop
[2025-07-27 20:24:35] 2025-07-28 00:24:05,802 | INFO     | all data control threads have been joined
[2025-07-27 20:24:35] 2025-07-28 00:24:05,962 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:05,962 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:05,963 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:06,034 | INFO     | all job control threads have been joined
[2025-07-27 20:24:35] 2025-07-28 00:24:06,107 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:06,283 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:06,433 | INFO     | all payload control threads have been joined
[2025-07-27 20:24:35] 2025-07-28 00:24:06,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:24:35] 2025-07-28 00:24:06,807 | INFO     | [data] control thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:06,905 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:06,906 | INFO     | [job] validate thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:06,960 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:07,040 | INFO     | [job] control thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:07,152 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:07,165 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:07,319 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:07,438 | INFO     | [payload] control thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:10,513 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:15,925 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:24:35] 2025-07-28 00:24:16,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:24:35] 2025-07-28 00:24:17,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514631526208)>', '<ExcThread(monitor, started 140514166806272)>']
[2025-07-27 20:24:35] 2025-07-28 00:24:22,065 | INFO     | all workflow threads have been joined
[2025-07-27 20:24:35] 2025-07-28 00:24:22,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:24:35] 2025-07-28 00:24:22,066 | INFO     | traces error code: 0
[2025-07-27 20:24:35] 2025-07-28 00:24:22,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:24:35] 2025-07-28 00:24:34,780 | INFO     | PID=28175 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:24:35] 2025-07-28 00:24:34,780 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:24:35] 2025-07-28 00:24:34,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:24:35] 2025-07-28 00:24:34,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:24:35] 2025-07-28 00:24:34,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:24:35] 2025-07-28 00:24:34,781 | INFO     | [monitor] control thread has ended
[2025-07-27 20:24:35] 2025-07-28 00:24:34,868 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:24:35] 2025-07-28 00:24:34,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:24:35] 2025-07-28 00:24:34,876 [wrapper] pilotpid: 28175
[2025-07-27 20:24:35] 2025-07-28 00:24:34,880 [wrapper] Pilot exit status: 0
[2025-07-27 20:24:35] 2025-07-28 00:24:34,897 [wrapper] pandaids: 6747413815
[2025-07-27 20:24:35] 2025-07-28 00:24:34,938 [wrapper] cleanup supervisor_pilot 21114 28176
[2025-07-27 20:24:35] 2025-07-28 00:24:34,942 [wrapper] Test setup, not cleaning
[2025-07-27 20:24:35] 2025-07-28 00:24:34,946 [wrapper] apfmon messages muted
[2025-07-27 20:24:35] 2025-07-28 00:24:34,950 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:24:35] 2025-07-28 00:24:34,954 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:24:35]  *** Error codes and diagnostics ***
[2025-07-27 20:24:35]     "exeErrorCode": 0,
[2025-07-27 20:24:35]     "exeErrorDiag": "",
[2025-07-27 20:24:35]     "pilotErrorCode": 0,
[2025-07-27 20:24:35]     "pilotErrorDiag": "",
[2025-07-27 20:24:35]  *** Listing of results directory ***
[2025-07-27 20:24:35] total 355120
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 10:41 pilot3.tar.gz
[2025-07-27 20:24:35] -rwx------ 1 boincer umatlas     36292 Jul 27 10:49 runpilot2-wrapper.sh
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 10:49 queuedata.json
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas       100 Jul 27 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:24:35] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 19:01 run_atlas
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas       105 Jul 27 19:01 job.xml
[2025-07-27 20:24:35] -rw-r--r-- 2 boincer umatlas 149205711 Jul 27 19:01 EVNT.45743347._002797.pool.root.1
[2025-07-27 20:24:35] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:01 start_atlas.sh
[2025-07-27 20:24:35] drwxrwx--x 2 boincer umatlas      4096 Jul 27 19:01 shared
[2025-07-27 20:24:35] -rw-r--r-- 2 boincer umatlas    542894 Jul 27 19:01 input.tar.gz
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas         0 Jul 27 19:01 boinc_lockfile
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 19:01 pandaJob.out
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas    980109 Jul 27 19:01 agis_schedconf.cvmfs.json
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas   1593052 Jul 27 19:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:24:35] drwx------ 4 boincer umatlas      4096 Jul 27 19:01 pilot3
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 20:21 init_data.xml
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas 208887101 Jul 27 20:23 HITS.45743349._050241.pool.root.1
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas       530 Jul 27 20:23 boinc_task_state.xml
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas      1047 Jul 27 20:23 memory_monitor_summary.json
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas    367316 Jul 27 20:23 log.45743349._050241.job.log.tgz.1
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas      7845 Jul 27 20:24 heartbeat.json
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas        27 Jul 27 20:24 wrapper_checkpoint.txt
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 20:24 boinc_mmap_file
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas        95 Jul 27 20:24 pilot_heartbeat.json
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas       745 Jul 27 20:24 pilotlog.txt
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas    470561 Jul 27 20:24 log.45743349._050241.job.log.1
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas       357 Jul 27 20:24 output.list
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas       620 Jul 27 20:24 runtime_log
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas    860160 Jul 27 20:24 result.tar.gz
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 20:24 runtime_log.err
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas       658 Jul 27 20:24 4xuMDmGsH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUaVLDm8o6FSn.diag
[2025-07-27 20:24:35] -rw-r--r-- 1 boincer umatlas     21916 Jul 27 20:24 stderr.txt
[2025-07-27 20:24:35] HITS file was successfully produced:
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas 208887101 Jul 27 20:23 shared/HITS.pool.root.1
[2025-07-27 20:24:35]  *** Contents of shared directory: ***
[2025-07-27 20:24:35] total 351096
[2025-07-27 20:24:35] -rw-r--r-- 2 boincer umatlas 149205711 Jul 27 19:01 ATLAS.root_0
[2025-07-27 20:24:35] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 19:01 start_atlas.sh
[2025-07-27 20:24:35] -rw-r--r-- 2 boincer umatlas    542894 Jul 27 19:01 input.tar.gz
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas 208887101 Jul 27 20:23 HITS.pool.root.1
[2025-07-27 20:24:35] -rw------- 1 boincer umatlas    860160 Jul 27 20:24 result.tar.gz
20:24:36 (24534): run_atlas exited; CPU time 53890.723976
20:24:36 (24534): called boinc_finish(0)

</stderr_txt>
]]>

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