Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:01:47 (1122111): wrapper (7.7.26015): starting
22:01:47 (1122111): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 22:01:47] Arguments: --nthreads 12
[2025-07-27 22:01:47] Threads: 12
[2025-07-27 22:01:47] Checking for CVMFS
[2025-07-27 22:01:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:01:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:01:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:01:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:01:48] 2.12.6.0 951823 19176 275280 148830 0 411 26829075 40960000 12894 16776704 0 42843712 99.715 55084462 27953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 22:01:48] CVMFS is ok
[2025-07-27 22:01:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 22:01:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 22:01:48] Further information can be found at the LHC@home message board.
[2025-07-27 22:01:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:01:48] Checking for apptainer binary...
[2025-07-27 22:01:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 22:01:48] Running /usr/bin/apptainer --version
[2025-07-27 22:01:48] apptainer version 1.4.1-1.el9
[2025-07-27 22:01:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:01:48] c6-8-12-3.aglt2.org
[2025-07-27 22:01:48] apptainer works
[2025-07-27 22:01:48] Set ATHENA_PROC_NUMBER=12
[2025-07-27 22:01:48] Set ATHENA_CORE_NUMBER=12
[2025-07-27 22:01:48] Starting ATLAS job with PandaID=6747376617
[2025-07-27 22:01:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:57:39]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:57:39] 2025-07-28 03:57:06,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:57:39] 2025-07-28 03:57:06,562 | INFO     | PID=1126399 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 23:57:39] 2025-07-28 03:57:06,563 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:57:39] 2025-07-28 03:57:06,564 | INFO     | .. there are 14 such processes running
[2025-07-27 23:57:39] 2025-07-28 03:57:06,564 | INFO     | sum of square deviations: 447398910.0353992
[2025-07-27 23:57:39] 2025-07-28 03:57:06,565 | INFO     | sum of deviations: 14569182399.769913
[2025-07-27 23:57:39] 2025-07-28 03:57:06,565 | INFO     | mean x: 1753671570.2654867
[2025-07-27 23:57:39] 2025-07-28 03:57:06,565 | INFO     | mean y: 2285317.274336283
[2025-07-27 23:57:39] 2025-07-28 03:57:06,566 | INFO     | -- intersect: -57104606101.99009
[2025-07-27 23:57:39] 2025-07-28 03:57:06,566 | INFO     | intersect: -57104606101.99009
[2025-07-27 23:57:39] 2025-07-28 03:57:06,566 | INFO     | chi2: 2.3890638307373577
[2025-07-27 23:57:39] 2025-07-28 03:57:06,568 | INFO     | sum of square deviations: 390606994.66666734
[2025-07-27 23:57:39] 2025-07-28 03:57:06,569 | INFO     | sum of deviations: 21434492416.444458
[2025-07-27 23:57:39] 2025-07-28 03:57:06,569 | INFO     | mean x: 1753671417.7777777
[2025-07-27 23:57:39] 2025-07-28 03:57:06,569 | INFO     | mean y: 2303008.6018518517
[2025-07-27 23:57:39] 2025-07-28 03:57:06,569 | INFO     | -- intersect: -96230117860.7955
[2025-07-27 23:57:39] 2025-07-28 03:57:06,569 | INFO     | intersect: -96230117860.7955
[2025-07-27 23:57:39] 2025-07-28 03:57:06,569 | INFO     | chi2: 1.492503496442113
[2025-07-27 23:57:39] 2025-07-28 03:57:06,570 | INFO     | current chi2=1.492503496442113 (change=37.52768439085746 %)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,570 | INFO     | sum of square deviations: 338831962.8349524
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | sum of deviations: 20064855795.45632
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | mean x: 1753671265.2815535
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | mean y: 2298972.3980582524
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | -- intersect: -103846112364.31438
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | intersect: -103846112364.31438
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | chi2: 1.4922092167948395
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | current chi2=1.4922092167948395 (change=0.019717183107114424 %)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,571 | INFO     | right removable region: 102
[2025-07-27 23:57:39] 2025-07-28 03:57:06,572 | INFO     | sum of square deviations: 390588694.66666734
[2025-07-27 23:57:39] 2025-07-28 03:57:06,572 | INFO     | sum of deviations: -2463097896.666665
[2025-07-27 23:57:39] 2025-07-28 03:57:06,573 | INFO     | mean x: 1753671722.7777777
[2025-07-27 23:57:39] 2025-07-28 03:57:06,573 | INFO     | mean y: 2330440.5555555555
[2025-07-27 23:57:39] 2025-07-28 03:57:06,573 | INFO     | -- intersect: 11061189006.608088
[2025-07-27 23:57:39] 2025-07-28 03:57:06,573 | INFO     | intersect: 11061189006.608088
[2025-07-27 23:57:39] 2025-07-28 03:57:06,573 | INFO     | chi2: 1.016052512761532
[2025-07-27 23:57:39] 2025-07-28 03:57:06,573 | INFO     | current chi2=1.016052512761532 (change=57.47068371764939 %)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,573 | INFO     | sum of square deviations: 338808538.8349524
[2025-07-27 23:57:39] 2025-07-28 03:57:06,574 | INFO     | sum of deviations: -4909847494.194176
[2025-07-27 23:57:39] 2025-07-28 03:57:06,574 | INFO     | mean x: 1753671875.2815535
[2025-07-27 23:57:39] 2025-07-28 03:57:06,574 | INFO     | mean y: 2337429.213592233
[2025-07-27 23:57:39] 2025-07-28 03:57:06,574 | INFO     | -- intersect: 25415691803.627247
[2025-07-27 23:57:39] 2025-07-28 03:57:06,574 | INFO     | intersect: 25415691803.627247
[2025-07-27 23:57:39] 2025-07-28 03:57:06,574 | INFO     | chi2: 0.952790732604198
[2025-07-27 23:57:39] 2025-07-28 03:57:06,574 | INFO     | current chi2=0.952790732604198 (change=6.226231357412296 %)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | left removable region: 20
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | sum of square deviations: 170950779.609756
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | sum of deviations: 445634897.0
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | mean x: 1753671844.8292682
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | mean y: 2363472.5
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | -- intersect: -4569112444.288926
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | intersect: -4569112444.288926
[2025-07-27 23:57:39] 2025-07-28 03:57:06,575 | INFO     | chi2: 0.01809129707925943
[2025-07-27 23:57:39] 2025-07-28 03:57:06,576 | INFO     | -- intersect: -4569112444.288926
[2025-07-27 23:57:39] 2025-07-28 03:57:06,576 | INFO     | current memory leak: 2.61 B/s (using 82 data points, chi2=0.02)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,576 | INFO     | could have reported an average CPU frequency of 2554 MHz (7 samples)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,576 | INFO     | ..............................
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . Timing measurements:
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . get job = 0 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . initial setup = 2 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . payload setup = 8 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . stage-in = 0 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . payload execution = 6867 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . stage-out = 0 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | . log creation = 0 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,577 | INFO     | ..............................
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | 
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | job summary report
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | --------------------------------------------------
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | PanDA job id: 6747376617
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | task id: 45743349
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | errors: (none)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | pilot state: finished 
[2025-07-27 23:57:39] 2025-07-28 03:57:06,766 | INFO     | transexitcode: 0
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | exeerrorcode: 0
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | exeerrordiag: 
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | exitcode: 0
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | exitmsg: OK
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | cpuconsumptiontime: 47412 s
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | nevents: 400
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | neventsw: 0
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | pid: 1133734
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | pgrp: 1133734
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | corecount: 12
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | event service: False
[2025-07-27 23:57:39] 2025-07-28 03:57:06,767 | INFO     | sizes: {0: 2397248, 1: 2397503, 2: 2397503, 7: 2397793, 12: 2397821, 6879: 2425143, 6881: 2434141, 6882: 2434197, 6888: 2434391}
[2025-07-27 23:57:39] 2025-07-28 03:57:06,768 | INFO     | --------------------------------------------------
[2025-07-27 23:57:39] 2025-07-28 03:57:06,768 | INFO     | 
[2025-07-27 23:57:39] 2025-07-28 03:57:06,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 23:57:39] 2025-07-28 03:57:06,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:57:39] 2025-07-28 03:57:06,790 | INFO     | job 6747376617 has completed (purged errors)
[2025-07-27 23:57:39] 2025-07-28 03:57:06,790 | INFO     | overall cleanup function is called
[2025-07-27 23:57:39] 2025-07-28 03:57:07,798 | INFO     | --- collectZombieJob: --- 10, [1133734]
[2025-07-27 23:57:39] 2025-07-28 03:57:07,798 | INFO     | zombie collector waiting for pid 1133734
[2025-07-27 23:57:39] 2025-07-28 03:57:07,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:57:39] 2025-07-28 03:57:07,799 | INFO     | collected zombie processes
[2025-07-27 23:57:39] 2025-07-28 03:57:07,799 | INFO     | will attempt to kill all subprocesses of pid=1133734
[2025-07-27 23:57:39] 2025-07-28 03:57:08,195 | INFO     | process IDs to be killed: [1133734] (in reverse order)
[2025-07-27 23:57:39] 2025-07-28 03:57:08,339 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:57:39] 2025-07-28 03:57:08,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:57:39] 2025-07-28 03:57:08,356 | INFO     | did not find any defunct processes belonging to 1133734
[2025-07-27 23:57:39] 2025-07-28 03:57:08,373 | INFO     | did not find any defunct processes belonging to 1133734
[2025-07-27 23:57:39] 2025-07-28 03:57:08,374 | INFO     | ready for new job
[2025-07-27 23:57:39] 2025-07-28 03:57:08,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:57:39] 2025-07-28 03:57:08,376 | INFO     | ***************************************
[2025-07-27 23:57:39] 2025-07-28 03:57:08,376 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:57:39] 2025-07-28 03:57:08,376 | INFO     | ***************************************
[2025-07-27 23:57:39] 2025-07-28 03:57:08,377 | INFO     | 
[2025-07-27 23:57:39] 2025-07-28 03:57:08,393 | INFO     | architecture information:
[2025-07-27 23:57:39] 2025-07-28 03:57:08,394 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:57:39] 2025-07-28 03:57:08,417 | INFO     | cat /etc/os-release:
[2025-07-27 23:57:39] NAME="CentOS Linux"
[2025-07-27 23:57:39] VERSION="7 (Core)"
[2025-07-27 23:57:39] ID="centos"
[2025-07-27 23:57:39] ID_LIKE="rhel fedora"
[2025-07-27 23:57:39] VERSION_ID="7"
[2025-07-27 23:57:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:57:39] ANSI_COLOR="0;31"
[2025-07-27 23:57:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:57:39] HOME_URL="https://www.centos.org/"
[2025-07-27 23:57:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:57:39] 
[2025-07-27 23:57:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:57:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:57:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:57:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:57:39] 
[2025-07-27 23:57:39] 2025-07-28 03:57:08,418 | INFO     | ***************************************
[2025-07-27 23:57:39] 2025-07-28 03:57:08,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 23:57:39] 2025-07-28 03:57:08,945 | INFO     | sufficient remaining disk space (56381931520 B)
[2025-07-27 23:57:39] 2025-07-28 03:57:08,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:57:39] 2025-07-28 03:57:08,946 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:57:39] 2025-07-28 03:57:08,946 | INFO     | update_server=False
[2025-07-27 23:57:39] 2025-07-28 03:57:08,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:57:39] 2025-07-28 03:57:08,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:57:39] 2025-07-28 03:57:08,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:57:39] 2025-07-28 03:57:08,947 | INFO     | aborting loop
[2025-07-27 23:57:39] 2025-07-28 03:57:09,051 | INFO     | all payload control threads have been joined
[2025-07-27 23:57:39] 2025-07-28 03:57:09,771 | INFO     | all job control threads have been joined
[2025-07-27 23:57:39] 2025-07-28 03:57:09,951 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:09,952 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,007 | INFO     | all data control threads have been joined
[2025-07-27 23:57:39] 2025-07-28 03:57:10,019 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,056 | INFO     | [payload] control thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,444 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,496 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,510 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,513 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,776 | INFO     | [job] control thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:10,954 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:11,012 | INFO     | [data] control thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:11,117 | INFO     | [job] validate thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:11,195 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:11,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:57:39] 2025-07-28 03:57:11,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:57:39] 2025-07-28 03:57:12,686 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:15,597 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:19,877 | INFO     | job.realtimelogging is not enabled
[2025-07-27 23:57:39] 2025-07-28 03:57:20,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:57:39] 2025-07-28 03:57:22,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550390961984)>', '<ExcThread(monitor, started 140549910685440)>']
[2025-07-27 23:57:39] 2025-07-28 03:57:27,567 | INFO     | all workflow threads have been joined
[2025-07-27 23:57:39] 2025-07-28 03:57:27,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:57:39] 2025-07-28 03:57:27,568 | INFO     | traces error code: 0
[2025-07-27 23:57:39] 2025-07-28 03:57:27,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:57:39] 2025-07-28 03:57:39,058 | INFO     | PID=1126399 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 23:57:39] 2025-07-28 03:57:39,059 | INFO     | .. there are 14 such processes running
[2025-07-27 23:57:39] 2025-07-28 03:57:39,059 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:57:39] 2025-07-28 03:57:39,059 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:57:39] 2025-07-28 03:57:39,059 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:57:39] 2025-07-28 03:57:39,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:57:39] 2025-07-28 03:57:39,059 | INFO     | [monitor] control thread has ended
[2025-07-27 23:57:39] 2025-07-28 03:57:39,256 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:57:39] 2025-07-28 03:57:39,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:57:39] 2025-07-28 03:57:39,264 [wrapper] pilotpid: 1126399
[2025-07-27 23:57:39] 2025-07-28 03:57:39,269 [wrapper] Pilot exit status: 0
[2025-07-27 23:57:39] 2025-07-28 03:57:39,281 [wrapper] pandaids: 6747376617
[2025-07-27 23:57:39] 2025-07-28 03:57:39,366 [wrapper] cleanup supervisor_pilot 1504644 1126400
[2025-07-27 23:57:39] 2025-07-28 03:57:39,371 [wrapper] Test setup, not cleaning
[2025-07-27 23:57:39] 2025-07-28 03:57:39,377 [wrapper] apfmon messages muted
[2025-07-27 23:57:39] 2025-07-28 03:57:39,381 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:57:39] 2025-07-28 03:57:39,385 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:57:39]  *** Error codes and diagnostics ***
[2025-07-27 23:57:39]     "exeErrorCode": 0,
[2025-07-27 23:57:39]     "exeErrorDiag": "",
[2025-07-27 23:57:39]     "pilotErrorCode": 0,
[2025-07-27 23:57:39]     "pilotErrorDiag": "",
[2025-07-27 23:57:39]  *** Listing of results directory ***
[2025-07-27 23:57:39] total 346692
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 07:42 pilot3.tar.gz
[2025-07-27 23:57:39] -rwx------. 1 boincer umatlas     36292 Jul 27 07:51 runpilot2-wrapper.sh
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 07:51 queuedata.json
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas       100 Jul 27 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:57:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 22:01 run_atlas
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas       105 Jul 27 22:01 job.xml
[2025-07-27 23:57:39] -rw-r--r--. 2 boincer umatlas 145857185 Jul 27 22:01 EVNT.45743347._002655.pool.root.1
[2025-07-27 23:57:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:01 start_atlas.sh
[2025-07-27 23:57:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 22:01 shared
[2025-07-27 23:57:39] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 22:01 input.tar.gz
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas         0 Jul 27 22:01 boinc_lockfile
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 22:01 pandaJob.out
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas    980125 Jul 27 22:01 agis_schedconf.cvmfs.json
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas   1593052 Jul 27 22:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:57:39] drwx------. 4 boincer umatlas      4096 Jul 27 22:02 pilot3
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas      6842 Jul 27 23:48 init_data.xml
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas       529 Jul 27 23:56 boinc_task_state.xml
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas 203253471 Jul 27 23:56 HITS.45743349._047826.pool.root.1
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas      1039 Jul 27 23:56 memory_monitor_summary.json
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas    379419 Jul 27 23:56 log.45743349._047826.job.log.tgz.1
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas        95 Jul 27 23:57 pilot_heartbeat.json
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas      7819 Jul 27 23:57 heartbeat.json
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 23:57 boinc_mmap_file
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas        27 Jul 27 23:57 wrapper_checkpoint.txt
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas       823 Jul 27 23:57 pilotlog.txt
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas    632833 Jul 27 23:57 log.45743349._047826.job.log.1
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas       357 Jul 27 23:57 output.list
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas       620 Jul 27 23:57 runtime_log
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas   1034240 Jul 27 23:57 result.tar.gz
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 23:57 runtime_log.err
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas       654 Jul 27 23:57 atGNDmI5E07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqAVLDmKVCsTm.diag
[2025-07-27 23:57:39] -rw-r--r--. 1 boincer umatlas     21100 Jul 27 23:57 stderr.txt
[2025-07-27 23:57:39] HITS file was successfully produced:
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas 203253471 Jul 27 23:56 shared/HITS.pool.root.1
[2025-07-27 23:57:39]  *** Contents of shared directory: ***
[2025-07-27 23:57:39] total 342496
[2025-07-27 23:57:39] -rw-r--r--. 2 boincer umatlas 145857185 Jul 27 22:01 ATLAS.root_0
[2025-07-27 23:57:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 22:01 start_atlas.sh
[2025-07-27 23:57:39] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 22:01 input.tar.gz
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas 203253471 Jul 27 23:56 HITS.pool.root.1
[2025-07-27 23:57:39] -rw-------. 1 boincer umatlas   1034240 Jul 27 23:57 result.tar.gz
23:57:40 (1122111): run_atlas exited; CPU time 47538.006944
23:57:40 (1122111): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN