Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:53:44 (8458): wrapper (7.7.26015): starting
18:53:44 (8458): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 18:53:44] Arguments: --nthreads 12
[2025-07-27 18:53:44] Threads: 12
[2025-07-27 18:53:44] Checking for CVMFS
[2025-07-27 18:53:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:53:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:53:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:53:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:53:45] 2.11.2.0 2991 112581 95632 148827 0 59 13882554 20275201 1 130560 0 39711704 99.970 9958376 10831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:53:45] CVMFS is ok
[2025-07-27 18:53:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:53:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:53:45] Further information can be found at the LHC@home message board.
[2025-07-27 18:53:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:53:45] Checking for apptainer binary...
[2025-07-27 18:53:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:53:45] Running /usr/bin/apptainer --version
[2025-07-27 18:53:45] apptainer version 1.3.2-1.el7
[2025-07-27 18:53:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:53:46] c-205-32.aglt2.org
[2025-07-27 18:53:46] apptainer works
[2025-07-27 18:53:46] Set ATHENA_PROC_NUMBER=12
[2025-07-27 18:53:46] Set ATHENA_CORE_NUMBER=12
[2025-07-27 18:53:46] Starting ATLAS job with PandaID=6747578488
[2025-07-27 18:53:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:11:48]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:11:48]  protocol_id=None
[2025-07-27 20:11:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:11:48]  replicas=None
[2025-07-27 20:11:48]  scope=mc23_13p6TeV
[2025-07-27 20:11:48]  status=None
[2025-07-27 20:11:48]  status_code=0
[2025-07-27 20:11:48]  storage_token=
[2025-07-27 20:11:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747578488/log.45743349._053247.job.log.tgz.1
[2025-07-27 20:11:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/d8/log.45743349._053247.job.log.tgz.1
[2025-07-27 20:11:48]  workdir=None
[2025-07-27 20:11:48] ]
[2025-07-27 20:11:48] 2025-07-28 00:11:06,196 | INFO     | transferring file log.45743349._053247.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747578488/log.45743349._053247.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:11:48] 2025-07-28 00:11:06,196 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747578488/log.45743349._053247.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._053247.job
[2025-07-27 20:11:48] 2025-07-28 00:11:06,218 | INFO     | adding to output.list: log.45743349._053247.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/d8/log.45743349._053247.job.log.tg
[2025-07-27 20:11:48] 2025-07-28 00:11:06,219 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:11:48] 2025-07-28 00:11:06,220 | INFO     | summary of transferred files:
[2025-07-27 20:11:48] 2025-07-28 00:11:06,220 | INFO     |  -- lfn=log.45743349._053247.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:11:48] 2025-07-28 00:11:06,220 | INFO     | stage-out finished correctly
[2025-07-27 20:11:48] 2025-07-28 00:11:06,649 | INFO     | monitor loop #345: job 0:6747578488 is in state 'finished'
[2025-07-27 20:11:48] 2025-07-28 00:11:06,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:11:48] 2025-07-28 00:11:08,773 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:11:48] 2025-07-28 00:11:09,151 | INFO     | monitor loop #346: job 0:6747578488 is in state 'finished'
[2025-07-27 20:11:48] 2025-07-28 00:11:09,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:11:48] 2025-07-28 00:11:10,088 | INFO     | job 6747578488 has state=finished
[2025-07-27 20:11:48] 2025-07-28 00:11:10,088 | INFO     | preparing for final server update for job 6747578488 in state='finished'
[2025-07-27 20:11:48] 2025-07-28 00:11:10,089 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:11:48] 2025-07-28 00:11:10,089 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:11:48] 2025-07-28 00:11:10,089 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:11:48] 2025-07-28 00:11:10,089 | INFO     | job 6747578488 has finished - writing final server update
[2025-07-27 20:11:48] 2025-07-28 00:11:10,090 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:11:48] 2025-07-28 00:11:10,090 | INFO     | executing command: lscpu
[2025-07-27 20:11:48] 2025-07-28 00:11:10,117 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:11:48] 2025-07-28 00:11:11,654 | INFO     | monitor loop #347: job 0:6747578488 is in state 'finished'
[2025-07-27 20:11:48] 2025-07-28 00:11:11,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:11:48] 2025-07-28 00:11:14,157 | INFO     | monitor loop #348: job 0:6747578488 is in state 'finished'
[2025-07-27 20:11:48] 2025-07-28 00:11:14,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:11:48] 2025-07-28 00:11:14,890 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 20:11:48] 2025-07-28 00:11:14,893 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-07-27 20:11:48] 2025-07-28 00:11:14,896 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747578488/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:11:48] 2025-07-28 00:11:14,897 | INFO     | extracted standard info from prmon json
[2025-07-27 20:11:48] 2025-07-28 00:11:14,897 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:11:48] 2025-07-28 00:11:14,897 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:11:48] 2025-07-28 00:11:14,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:11:48] 2025-07-28 00:11:14,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:11:48] 2025-07-28 00:11:14,900 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:11:48] 2025-07-28 00:11:14,900 | INFO     | sum of square deviations: 101843770.0
[2025-07-27 20:11:48] 2025-07-28 00:11:14,900 | INFO     | sum of deviations: -4786064391.999999
[2025-07-27 20:11:48] 2025-07-28 00:11:14,900 | INFO     | mean x: 1753659248.0
[2025-07-27 20:11:48] 2025-07-28 00:11:14,900 | INFO     | mean y: 2723232.0434782607
[2025-07-27 20:11:48] 2025-07-28 00:11:14,901 | INFO     | -- intersect: 82414500433.08675
[2025-07-27 20:11:48] 2025-07-28 00:11:14,901 | INFO     | intersect: 82414500433.08675
[2025-07-27 20:11:48] 2025-07-28 00:11:14,901 | INFO     | chi2: 0.0769265644415535
[2025-07-27 20:11:48] 2025-07-28 00:11:14,901 | INFO     | -- intersect: 82414500433.08675
[2025-07-27 20:11:48] 2025-07-28 00:11:14,901 | INFO     | current memory leak: -46.99 B/s (using 69 data points, chi2=0.08)
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | ..............................
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | . Timing measurements:
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | . get job = 0 s
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | . initial setup = 2 s
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | . payload setup = 9 s
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | . stage-in = 0 s
[2025-07-27 20:11:48] 2025-07-28 00:11:14,902 | INFO     | . payload execution = 4597 s
[2025-07-27 20:11:48] 2025-07-28 00:11:14,903 | INFO     | . stage-out = 0 s
[2025-07-27 20:11:48] 2025-07-28 00:11:14,903 | INFO     | . log creation = 0 s
[2025-07-27 20:11:48] 2025-07-28 00:11:14,903 | INFO     | ..............................
[2025-07-27 20:11:48] 2025-07-28 00:11:15,309 | INFO     | 
[2025-07-27 20:11:48] 2025-07-28 00:11:15,309 | INFO     | job summary report
[2025-07-27 20:11:48] 2025-07-28 00:11:15,310 | INFO     | --------------------------------------------------
[2025-07-27 20:11:48] 2025-07-28 00:11:15,310 | INFO     | PanDA job id: 6747578488
[2025-07-27 20:11:48] 2025-07-28 00:11:15,310 | INFO     | task id: 45743349
[2025-07-27 20:11:48] 2025-07-28 00:11:15,310 | INFO     | errors: (none)
[2025-07-27 20:11:48] 2025-07-28 00:11:15,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:11:48] 2025-07-28 00:11:15,310 | INFO     | pilot state: finished 
[2025-07-27 20:11:48] 2025-07-28 00:11:15,311 | INFO     | transexitcode: 0
[2025-07-27 20:11:48] 2025-07-28 00:11:15,311 | INFO     | exeerrorcode: 0
[2025-07-27 20:11:48] 2025-07-28 00:11:15,311 | INFO     | exeerrordiag: 
[2025-07-27 20:11:48] 2025-07-28 00:11:15,311 | INFO     | exitcode: 0
[2025-07-27 20:11:48] 2025-07-28 00:11:15,311 | INFO     | exitmsg: OK
[2025-07-27 20:11:48] 2025-07-28 00:11:15,311 | INFO     | cpuconsumptiontime: 50105 s
[2025-07-27 20:11:48] 2025-07-28 00:11:15,311 | INFO     | nevents: 400
[2025-07-27 20:11:48] 2025-07-28 00:11:15,312 | INFO     | neventsw: 0
[2025-07-27 20:11:48] 2025-07-28 00:11:15,312 | INFO     | pid: 18548
[2025-07-27 20:11:48] 2025-07-28 00:11:15,312 | INFO     | pgrp: 18548
[2025-07-27 20:11:48] 2025-07-28 00:11:15,312 | INFO     | corecount: 12
[2025-07-27 20:11:48] 2025-07-28 00:11:15,312 | INFO     | event service: False
[2025-07-27 20:11:48] 2025-07-28 00:11:15,312 | INFO     | sizes: {0: 2397197, 1: 2397452, 6: 2397714, 12: 2397742, 4610: 2423905, 4611: 2433086, 4614: 2433086, 4620: 2433280}
[2025-07-27 20:11:48] 2025-07-28 00:11:15,312 | INFO     | --------------------------------------------------
[2025-07-27 20:11:48] 2025-07-28 00:11:15,313 | INFO     | 
[2025-07-27 20:11:48] 2025-07-28 00:11:15,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:11:48] 2025-07-28 00:11:15,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,401 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,401 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:11:48] 2025-07-28 00:11:15,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,404 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:11:48] 2025-07-28 00:11:15,404 | INFO     | job 6747578488 has completed (purged errors)
[2025-07-27 20:11:48] 2025-07-28 00:11:15,404 | INFO     | overall cleanup function is called
[2025-07-27 20:11:48] 2025-07-28 00:11:15,703 | INFO     | PID=12084 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:11:48] 2025-07-28 00:11:16,409 | INFO     | --- collectZombieJob: --- 10, [18548]
[2025-07-27 20:11:48] 2025-07-28 00:11:16,409 | INFO     | zombie collector waiting for pid 18548
[2025-07-27 20:11:48] 2025-07-28 00:11:16,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:11:48] 2025-07-28 00:11:16,422 | INFO     | collected zombie processes
[2025-07-27 20:11:48] 2025-07-28 00:11:16,423 | INFO     | will attempt to kill all subprocesses of pid=18548
[2025-07-27 20:11:48] 2025-07-28 00:11:16,511 | INFO     | process IDs to be killed: [18548] (in reverse order)
[2025-07-27 20:11:48] 2025-07-28 00:11:16,560 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:11:48] 2025-07-28 00:11:16,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:11:48] 2025-07-28 00:11:16,564 | INFO     | did not find any defunct processes belonging to 18548
[2025-07-27 20:11:48] 2025-07-28 00:11:16,567 | INFO     | did not find any defunct processes belonging to 18548
[2025-07-27 20:11:48] 2025-07-28 00:11:16,568 | INFO     | ready for new job
[2025-07-27 20:11:48] 2025-07-28 00:11:16,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:11:48] 2025-07-28 00:11:16,569 | INFO     | ***************************************
[2025-07-27 20:11:48] 2025-07-28 00:11:16,569 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:11:48] 2025-07-28 00:11:16,569 | INFO     | ***************************************
[2025-07-27 20:11:48] 2025-07-28 00:11:16,569 | INFO     | 
[2025-07-27 20:11:48] 2025-07-28 00:11:16,570 | INFO     | architecture information:
[2025-07-27 20:11:48] 2025-07-28 00:11:16,570 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:11:48] 2025-07-28 00:11:16,584 | INFO     | cat /etc/os-release:
[2025-07-27 20:11:48] NAME="CentOS Linux"
[2025-07-27 20:11:48] VERSION="7 (Core)"
[2025-07-27 20:11:48] ID="centos"
[2025-07-27 20:11:48] ID_LIKE="rhel fedora"
[2025-07-27 20:11:48] VERSION_ID="7"
[2025-07-27 20:11:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:11:48] ANSI_COLOR="0;31"
[2025-07-27 20:11:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:11:48] HOME_URL="https://www.centos.org/"
[2025-07-27 20:11:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:11:48] 
[2025-07-27 20:11:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:11:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:11:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:11:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:11:48] 
[2025-07-27 20:11:48] 2025-07-28 00:11:16,585 | INFO     | ***************************************
[2025-07-27 20:11:48] 2025-07-28 00:11:17,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:11:48] 2025-07-28 00:11:17,103 | INFO     | sufficient remaining disk space (29534191616 B)
[2025-07-27 20:11:48] 2025-07-28 00:11:17,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:11:48] 2025-07-28 00:11:17,104 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:11:48] 2025-07-28 00:11:17,104 | INFO     | update_server=False
[2025-07-27 20:11:48] 2025-07-28 00:11:17,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:11:48] 2025-07-28 00:11:17,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:11:48] 2025-07-28 00:11:17,294 | INFO     | all payload control threads have been joined
[2025-07-27 20:11:48] 2025-07-28 00:11:17,387 | INFO     | all data control threads have been joined
[2025-07-27 20:11:48] 2025-07-28 00:11:17,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:11:48] 2025-07-28 00:11:17,665 | INFO     | aborting loop
[2025-07-27 20:11:48] 2025-07-28 00:11:18,109 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,295 | INFO     | [payload] control thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,313 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,367 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,374 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,385 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,393 | INFO     | [data] control thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,430 | INFO     | all job control threads have been joined
[2025-07-27 20:11:48] 2025-07-28 00:11:18,671 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:18,710 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:19,105 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:19,285 | INFO     | [job] validate thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:19,293 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:19,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:11:48] 2025-07-28 00:11:19,435 | INFO     | [job] control thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:19,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:11:48] 2025-07-28 00:11:21,002 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:23,369 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:27,753 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:11:48] 2025-07-28 00:11:28,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:11:48] 2025-07-28 00:11:28,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488312563520)>', '<ExcThread(monitor, started 140488011134720)>']
[2025-07-27 20:11:48] 2025-07-28 00:11:33,823 | INFO     | all workflow threads have been joined
[2025-07-27 20:11:48] 2025-07-28 00:11:33,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:11:48] 2025-07-28 00:11:33,832 | INFO     | traces error code: 0
[2025-07-27 20:11:48] 2025-07-28 00:11:33,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:11:48] 2025-07-28 00:11:47,904 | INFO     | PID=12084 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:11:48] 2025-07-28 00:11:47,904 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:11:48] 2025-07-28 00:11:47,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:11:48] 2025-07-28 00:11:47,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:11:48] 2025-07-28 00:11:47,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:11:48] 2025-07-28 00:11:47,904 | INFO     | [monitor] control thread has ended
[2025-07-27 20:11:48] 2025-07-28 00:11:47,985 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:11:48] 2025-07-28 00:11:47,988 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:11:48] 2025-07-28 00:11:47,991 [wrapper] pilotpid: 12084
[2025-07-27 20:11:48] 2025-07-28 00:11:47,995 [wrapper] Pilot exit status: 0
[2025-07-27 20:11:48] 2025-07-28 00:11:48,009 [wrapper] pandaids: 6747578488
[2025-07-27 20:11:48] 2025-07-28 00:11:48,048 [wrapper] cleanup supervisor_pilot   754 12085
[2025-07-27 20:11:48] 2025-07-28 00:11:48,051 [wrapper] Test setup, not cleaning
[2025-07-27 20:11:48] 2025-07-28 00:11:48,055 [wrapper] apfmon messages muted
[2025-07-27 20:11:48] 2025-07-28 00:11:48,059 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:11:48] 2025-07-28 00:11:48,062 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:11:48]  *** Error codes and diagnostics ***
[2025-07-27 20:11:48]     "exeErrorCode": 0,
[2025-07-27 20:11:48]     "exeErrorDiag": "",
[2025-07-27 20:11:48]     "pilotErrorCode": 0,
[2025-07-27 20:11:48]     "pilotErrorDiag": "",
[2025-07-27 20:11:48]  *** Listing of results directory ***
[2025-07-27 20:11:48] total 337340
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 13:39 pilot3.tar.gz
[2025-07-27 20:11:48] -rwx------ 1 boincer umatlas     36292 Jul 27 13:56 runpilot2-wrapper.sh
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 13:56 queuedata.json
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas       100 Jul 27 18:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:11:48] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 18:53 run_atlas
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas       105 Jul 27 18:53 job.xml
[2025-07-27 20:11:48] -rw-r--r-- 2 boincer umatlas 143036625 Jul 27 18:53 EVNT.45743347._002912.pool.root.1
[2025-07-27 20:11:48] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:53 start_atlas.sh
[2025-07-27 20:11:48] drwxrwx--x 2 boincer umatlas      4096 Jul 27 18:53 shared
[2025-07-27 20:11:48] -rw-r--r-- 2 boincer umatlas    542892 Jul 27 18:53 input.tar.gz
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas         0 Jul 27 18:53 boinc_lockfile
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 18:53 pandaJob.out
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas    980109 Jul 27 18:53 agis_schedconf.cvmfs.json
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas   1593052 Jul 27 18:53 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:11:48] drwx------ 4 boincer umatlas      4096 Jul 27 18:53 pilot3
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 20:02 init_data.xml
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas 196904301 Jul 27 20:10 HITS.45743349._053247.pool.root.1
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas       529 Jul 27 20:10 boinc_task_state.xml
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas        95 Jul 27 20:10 pilot_heartbeat.json
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas      1049 Jul 27 20:11 memory_monitor_summary.json
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas    365087 Jul 27 20:11 log.45743349._053247.job.log.tgz.1
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas      7856 Jul 27 20:11 heartbeat.json
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 20:11 boinc_mmap_file
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas        27 Jul 27 20:11 wrapper_checkpoint.txt
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas       745 Jul 27 20:11 pilotlog.txt
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas    445087 Jul 27 20:11 log.45743349._053247.job.log.1
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas       357 Jul 27 20:11 output.list
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas       620 Jul 27 20:11 runtime_log
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas    829440 Jul 27 20:11 result.tar.gz
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 20:11 runtime_log.err
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas       659 Jul 27 20:11 ak3KDmpmK07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm11VLDmgrlB5n.diag
[2025-07-27 20:11:48] -rw-r--r-- 1 boincer umatlas     21912 Jul 27 20:11 stderr.txt
[2025-07-27 20:11:48] HITS file was successfully produced:
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas 196904301 Jul 27 20:10 shared/HITS.pool.root.1
[2025-07-27 20:11:48]  *** Contents of shared directory: ***
[2025-07-27 20:11:48] total 333340
[2025-07-27 20:11:48] -rw-r--r-- 2 boincer umatlas 143036625 Jul 27 18:53 ATLAS.root_0
[2025-07-27 20:11:48] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:53 start_atlas.sh
[2025-07-27 20:11:48] -rw-r--r-- 2 boincer umatlas    542892 Jul 27 18:53 input.tar.gz
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas 196904301 Jul 27 20:10 HITS.pool.root.1
[2025-07-27 20:11:48] -rw------- 1 boincer umatlas    829440 Jul 27 20:11 result.tar.gz
20:11:49 (8458): run_atlas exited; CPU time 50083.076867
20:11:49 (8458): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN