Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:47:12 (815096): wrapper (7.7.26015): starting
18:47:12 (815096): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:47:12] Arguments: --nthreads 8
[2025-07-27 18:47:12] Threads: 8
[2025-07-27 18:47:12] Checking for CVMFS
[2025-07-27 18:47:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:47:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:47:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:47:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:47:13] 2.13.0.0 79137 24641 326692 148827 0 1005 22723741 40960001 23568 16776704 1 202508571 99.655 222736060 29106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 18:47:13] CVMFS is ok
[2025-07-27 18:47:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:47:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:47:13] Further information can be found at the LHC@home message board.
[2025-07-27 18:47:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:47:13] Checking for apptainer binary...
[2025-07-27 18:47:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:47:13] Running /usr/bin/apptainer --version
[2025-07-27 18:47:13] apptainer version 1.4.1-1.el9
[2025-07-27 18:47:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:47:13] c8-7-6.aglt2.org
[2025-07-27 18:47:13] apptainer works
[2025-07-27 18:47:13] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:47:13] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:47:13] Starting ATLAS job with PandaID=6747412833
[2025-07-27 18:47:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:58:13]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:58:13]  replicas=None
[2025-07-27 19:58:13]  scope=mc23_13p6TeV
[2025-07-27 19:58:13]  status=None
[2025-07-27 19:58:13]  status_code=0
[2025-07-27 19:58:13]  storage_token=
[2025-07-27 19:58:13]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747412833/log.45743349._049716.job.log.tgz.1
[2025-07-27 19:58:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/a5/log.45743349._049716.job.log.tgz.1
[2025-07-27 19:58:13]  workdir=None
[2025-07-27 19:58:13] ]
[2025-07-27 19:58:13] 2025-07-27 23:57:27,554 | INFO     | transferring file log.45743349._049716.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747412833/log.45743349._049716.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:58:13] 2025-07-27 23:57:27,554 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747412833/log.45743349._049716.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._049716.job
[2025-07-27 19:58:13] 2025-07-27 23:57:27,593 | INFO     | adding to output.list: log.45743349._049716.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/a5/log.45743349._049716.job.log.tg
[2025-07-27 19:58:13] 2025-07-27 23:57:27,594 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:58:13] 2025-07-27 23:57:27,594 | INFO     | summary of transferred files:
[2025-07-27 19:58:13] 2025-07-27 23:57:27,594 | INFO     |  -- lfn=log.45743349._049716.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:58:13] 2025-07-27 23:57:27,594 | INFO     | stage-out finished correctly
[2025-07-27 19:58:13] 2025-07-27 23:57:29,091 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:58:13] 2025-07-27 23:57:30,789 | INFO     | job 6747412833 has state=finished
[2025-07-27 19:58:13] 2025-07-27 23:57:30,789 | INFO     | preparing for final server update for job 6747412833 in state='finished'
[2025-07-27 19:58:13] 2025-07-27 23:57:30,790 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:58:13] 2025-07-27 23:57:30,790 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:58:13] 2025-07-27 23:57:30,790 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:58:13] 2025-07-27 23:57:30,790 | INFO     | job 6747412833 has finished - writing final server update
[2025-07-27 19:58:13] 2025-07-27 23:57:30,791 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:58:13] 2025-07-27 23:57:30,791 | INFO     | executing command: lscpu
[2025-07-27 19:58:13] 2025-07-27 23:57:30,874 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:58:13] 2025-07-27 23:57:31,471 | WARNING  | process 834194 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:58:13] 2025-07-27 23:57:31,472 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747412833/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:58:13] 2025-07-27 23:57:31,891 | INFO     | number of running child processes to parent process 834194: 1
[2025-07-27 19:58:13] 2025-07-27 23:57:31,891 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:58:13] 2025-07-27 23:57:34,395 | INFO     | monitor loop #289: job 0:6747412833 is in state 'finished'
[2025-07-27 19:58:13] 2025-07-27 23:57:34,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:13] 2025-07-27 23:57:36,899 | INFO     | monitor loop #290: job 0:6747412833 is in state 'finished'
[2025-07-27 19:58:13] 2025-07-27 23:57:36,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:13] 2025-07-27 23:57:39,415 | INFO     | monitor loop #291: job 0:6747412833 is in state 'finished'
[2025-07-27 19:58:13] 2025-07-27 23:57:39,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:13] 2025-07-27 23:57:39,896 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 19:58:13] 2025-07-27 23:57:39,914 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.523249999997
[2025-07-27 19:58:13] 2025-07-27 23:57:39,927 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747412833/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:58:13] 2025-07-27 23:57:39,928 | INFO     | extracted standard info from prmon json
[2025-07-27 19:58:13] 2025-07-27 23:57:39,928 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:58:13] 2025-07-27 23:57:39,928 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:58:13] 2025-07-27 23:57:39,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:58:13] 2025-07-27 23:57:39,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:58:13] 2025-07-27 23:57:39,929 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:58:13] 2025-07-27 23:57:39,929 | INFO     | sum of square deviations: 73882315.5
[2025-07-27 19:58:13] 2025-07-27 23:57:39,929 | INFO     | sum of deviations: -1900868122.4999998
[2025-07-27 19:58:13] 2025-07-27 23:57:39,929 | INFO     | mean x: 1753658639.5
[2025-07-27 19:58:13] 2025-07-27 23:57:39,929 | INFO     | mean y: 2247626.7580645164
[2025-07-27 19:58:13] 2025-07-27 23:57:39,929 | INFO     | -- intersect: 45120944611.45488
[2025-07-27 19:58:13] 2025-07-27 23:57:39,929 | INFO     | intersect: 45120944611.45488
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | chi2: 0.027232861676070495
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | -- intersect: 45120944611.45488
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | current memory leak: -25.73 B/s (using 62 data points, chi2=0.03)
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | could have reported an average CPU frequency of 3757 MHz (6 samples)
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | ..............................
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . Timing measurements:
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . get job = 0 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . initial setup = 3 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . payload setup = 8 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . stage-in = 0 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . payload execution = 4174 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . stage-out = 0 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | . log creation = 0 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,930 | INFO     | ..............................
[2025-07-27 19:58:13] 2025-07-27 23:57:39,983 | INFO     | 
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | job summary report
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | --------------------------------------------------
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | PanDA job id: 6747412833
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | task id: 45743349
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | errors: (none)
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | pilot state: finished 
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | transexitcode: 0
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | exeerrorcode: 0
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | exeerrordiag: 
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | exitcode: 0
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | exitmsg: OK
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | cpuconsumptiontime: 27027 s
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | nevents: 400
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | neventsw: 0
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | pid: 834194
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | pgrp: 834194
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | corecount: 8
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | event service: False
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | sizes: {0: 2397304, 1: 2397503, 5: 2397765, 11: 2397821, 4186: 2424014, 4187: 2433012, 4188: 2433196, 4199: 2433390}
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | --------------------------------------------------
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | 
[2025-07-27 19:58:13] 2025-07-27 23:57:39,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 19:58:13] 2025-07-27 23:57:40,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | job 6747412833 has completed (purged errors)
[2025-07-27 19:58:13] 2025-07-27 23:57:40,012 | INFO     | overall cleanup function is called
[2025-07-27 19:58:13] 2025-07-27 23:57:41,037 | INFO     | --- collectZombieJob: --- 10, [834194]
[2025-07-27 19:58:13] 2025-07-27 23:57:41,037 | INFO     | zombie collector waiting for pid 834194
[2025-07-27 19:58:13] 2025-07-27 23:57:41,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:58:13] 2025-07-27 23:57:41,037 | INFO     | collected zombie processes
[2025-07-27 19:58:13] 2025-07-27 23:57:41,037 | INFO     | will attempt to kill all subprocesses of pid=834194
[2025-07-27 19:58:13] 2025-07-27 23:57:41,656 | INFO     | process IDs to be killed: [834194] (in reverse order)
[2025-07-27 19:58:13] 2025-07-27 23:57:41,844 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:58:13] 2025-07-27 23:57:41,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:58:13] 2025-07-27 23:57:41,868 | INFO     | did not find any defunct processes belonging to 834194
[2025-07-27 19:58:13] 2025-07-27 23:57:41,891 | INFO     | did not find any defunct processes belonging to 834194
[2025-07-27 19:58:13] 2025-07-27 23:57:41,892 | INFO     | ready for new job
[2025-07-27 19:58:13] 2025-07-27 23:57:41,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:58:13] 2025-07-27 23:57:41,893 | INFO     | ***************************************
[2025-07-27 19:58:13] 2025-07-27 23:57:41,893 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:58:13] 2025-07-27 23:57:41,893 | INFO     | ***************************************
[2025-07-27 19:58:13] 2025-07-27 23:57:41,893 | INFO     | 
[2025-07-27 19:58:13] 2025-07-27 23:57:41,911 | INFO     | architecture information:
[2025-07-27 19:58:13] 2025-07-27 23:57:41,911 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:58:13] 2025-07-27 23:57:41,928 | INFO     | cat /etc/os-release:
[2025-07-27 19:58:13] NAME="CentOS Linux"
[2025-07-27 19:58:13] VERSION="7 (Core)"
[2025-07-27 19:58:13] ID="centos"
[2025-07-27 19:58:13] ID_LIKE="rhel fedora"
[2025-07-27 19:58:13] VERSION_ID="7"
[2025-07-27 19:58:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:58:13] ANSI_COLOR="0;31"
[2025-07-27 19:58:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:58:13] HOME_URL="https://www.centos.org/"
[2025-07-27 19:58:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:58:13] 
[2025-07-27 19:58:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:58:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:58:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:58:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:58:13] 
[2025-07-27 19:58:13] 2025-07-27 23:57:41,928 | INFO     | ***************************************
[2025-07-27 19:58:13] 2025-07-27 23:57:42,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 19:58:13] 2025-07-27 23:57:42,449 | INFO     | sufficient remaining disk space (172405817344 B)
[2025-07-27 19:58:13] 2025-07-27 23:57:42,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:58:13] 2025-07-27 23:57:42,449 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:58:13] 2025-07-27 23:57:42,449 | INFO     | update_server=False
[2025-07-27 19:58:13] 2025-07-27 23:57:42,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:58:13] 2025-07-27 23:57:42,536 | INFO     | all payload control threads have been joined
[2025-07-27 19:58:13] 2025-07-27 23:57:42,649 | INFO     | all job control threads have been joined
[2025-07-27 19:58:13] 2025-07-27 23:57:42,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:58:13] 2025-07-27 23:57:42,927 | INFO     | aborting loop
[2025-07-27 19:58:13] 2025-07-27 23:57:43,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:58:13] 2025-07-27 23:57:43,454 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:43,499 | INFO     | all data control threads have been joined
[2025-07-27 19:58:13] 2025-07-27 23:57:43,541 | INFO     | [payload] control thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:43,655 | INFO     | [job] control thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:43,668 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:43,936 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:43,941 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:43,954 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:44,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:58:13] 2025-07-27 23:57:44,335 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:44,369 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:44,381 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:44,504 | INFO     | [data] control thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:44,515 | INFO     | [job] validate thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:44,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:58:13] 2025-07-27 23:57:45,205 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:46,001 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:48,291 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:53,270 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:58:13] 2025-07-27 23:57:54,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:58:13] 2025-07-27 23:57:55,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953935509312)>', '<ExcThread(monitor, started 139953304491776)>']
[2025-07-27 19:58:13] 2025-07-27 23:58:00,890 | INFO     | all workflow threads have been joined
[2025-07-27 19:58:13] 2025-07-27 23:58:00,892 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:58:13] 2025-07-27 23:58:00,894 | INFO     | traces error code: 0
[2025-07-27 19:58:13] 2025-07-27 23:58:00,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:58:13] 2025-07-27 23:58:13,286 | INFO     | PID=822883 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:58:13] 2025-07-27 23:58:13,286 | INFO     | .. there are 16 such processes running
[2025-07-27 19:58:13] 2025-07-27 23:58:13,287 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:58:13] 2025-07-27 23:58:13,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:58:13] 2025-07-27 23:58:13,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:58:13] 2025-07-27 23:58:13,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:58:13] 2025-07-27 23:58:13,287 | INFO     | [monitor] control thread has ended
[2025-07-27 19:58:13] 2025-07-27 23:58:13,483 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:58:13] 2025-07-27 23:58:13,495 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:58:13] 2025-07-27 23:58:13,505 [wrapper] pilotpid: 822883
[2025-07-27 19:58:13] 2025-07-27 23:58:13,507 [wrapper] Pilot exit status: 0
[2025-07-27 19:58:13] 2025-07-27 23:58:13,530 [wrapper] pandaids: 6747412833
[2025-07-27 19:58:13] 2025-07-27 23:58:13,645 [wrapper] cleanup supervisor_pilot 1441018 822884
[2025-07-27 19:58:13] 2025-07-27 23:58:13,647 [wrapper] Test setup, not cleaning
[2025-07-27 19:58:13] 2025-07-27 23:58:13,652 [wrapper] apfmon messages muted
[2025-07-27 19:58:13] 2025-07-27 23:58:13,662 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:58:13] 2025-07-27 23:58:13,664 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:58:13]  *** Error codes and diagnostics ***
[2025-07-27 19:58:13]     "exeErrorCode": 0,
[2025-07-27 19:58:13]     "exeErrorDiag": "",
[2025-07-27 19:58:13]     "pilotErrorCode": 0,
[2025-07-27 19:58:13]     "pilotErrorDiag": "",
[2025-07-27 19:58:13]  *** Listing of results directory ***
[2025-07-27 19:58:13] total 430332
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 09:42 pilot3.tar.gz
[2025-07-27 19:58:13] -rwx------. 1 boincer umatlas     36292 Jul 27 10:09 runpilot2-wrapper.sh
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:09 queuedata.json
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:58:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:47 run_atlas
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:47 job.xml
[2025-07-27 19:58:13] -rw-r--r--. 2 boincer umatlas 230399683 Jul 27 18:47 EVNT.45743347._002739.pool.root.1
[2025-07-27 19:58:13] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 18:47 input.tar.gz
[2025-07-27 19:58:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:47 start_atlas.sh
[2025-07-27 19:58:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:47 shared
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:47 boinc_lockfile
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:47 pandaJob.out
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas    980109 Jul 27 18:47 agis_schedconf.cvmfs.json
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:58:13] drwx------. 4 boincer umatlas      4096 Jul 27 18:47 pilot3
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas      7160 Jul 27 19:55 init_data.xml
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas 204953616 Jul 27 19:57 HITS.45743349._049716.pool.root.1
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:57 boinc_task_state.xml
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas      1059 Jul 27 19:57 memory_monitor_summary.json
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas    305731 Jul 27 19:57 log.45743349._049716.job.log.tgz.1
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas        95 Jul 27 19:57 pilot_heartbeat.json
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas      7778 Jul 27 19:57 heartbeat.json
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:58 wrapper_checkpoint.txt
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas       822 Jul 27 19:58 pilotlog.txt
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:58 boinc_mmap_file
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas    411936 Jul 27 19:58 log.45743349._049716.job.log.1
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas       357 Jul 27 19:58 output.list
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:58 runtime_log
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas    737280 Jul 27 19:58 result.tar.gz
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas      8650 Jul 27 19:58 runtime_log.err
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas       651 Jul 27 19:58 GzAODmbFH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmue2KDmevnfam.diag
[2025-07-27 19:58:13] -rw-r--r--. 1 boincer umatlas     21894 Jul 27 19:58 stderr.txt
[2025-07-27 19:58:13] HITS file was successfully produced:
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas 204953616 Jul 27 19:57 shared/HITS.pool.root.1
[2025-07-27 19:58:13]  *** Contents of shared directory: ***
[2025-07-27 19:58:13] total 426424
[2025-07-27 19:58:13] -rw-r--r--. 2 boincer umatlas 230399683 Jul 27 18:47 ATLAS.root_0
[2025-07-27 19:58:13] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 18:47 input.tar.gz
[2025-07-27 19:58:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:47 start_atlas.sh
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas 204953616 Jul 27 19:57 HITS.pool.root.1
[2025-07-27 19:58:13] -rw-------. 1 boincer umatlas    737280 Jul 27 19:58 result.tar.gz
19:58:15 (815096): run_atlas exited; CPU time 27126.292103
19:58:15 (815096): called boinc_finish(0)

</stderr_txt>
]]>

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