Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:58:20 (1113): wrapper (7.7.26015): starting
12:58:20 (1113): wrapper: running run_atlas (--nthreads 8)
[2025-07-28 12:58:20] Arguments: --nthreads 8
[2025-07-28 12:58:20] Threads: 8
[2025-07-28 12:58:20] Checking for CVMFS
[2025-07-28 12:58:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:58:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:58:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:58:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:58:22] 2.11.2.0 25395 110897 138860 148845 0 155 18650470 25165824 4097 130560 0 84466614 99.868 49386389 3567 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-28 12:58:22] CVMFS is ok
[2025-07-28 12:58:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:58:22] Checking for apptainer binary...
[2025-07-28 12:58:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:58:22] Running /usr/bin/apptainer --version
[2025-07-28 12:58:22] apptainer version 1.3.2-1.el7
[2025-07-28 12:58:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:58:24] cg-vwn454.simple-grid.lan
[2025-07-28 12:58:24] apptainer works
[2025-07-28 12:58:24] Set ATHENA_PROC_NUMBER=8
[2025-07-28 12:58:24] Set ATHENA_CORE_NUMBER=8
[2025-07-28 12:58:24] Starting ATLAS job with PandaID=6747577492
[2025-07-28 12:58:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:12:57]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:12:57] 2025-07-28 15:11:54,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,098 | INFO     | monitor loop #1040: job 0:6747577492 is in state 'finished'
[2025-07-28 17:12:57] 2025-07-28 15:11:57,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,748 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:12:57] 2025-07-28 15:11:57,749 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,752 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6747577492/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,753 | INFO     | extracted standard info from prmon json
[2025-07-28 17:12:57] 2025-07-28 15:11:57,753 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:12:57] 2025-07-28 15:11:57,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:12:57] 2025-07-28 15:11:57,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:12:57] 2025-07-28 15:11:57,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:12:57] 2025-07-28 15:11:57,759 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:12:57] 2025-07-28 15:11:57,759 | INFO     | sum of square deviations: 4729621702.0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,772 | INFO     | sum of deviations: -205876403.00000173
[2025-07-28 17:12:57] 2025-07-28 15:11:57,773 | INFO     | mean x: 1753707906.5
[2025-07-28 17:12:57] 2025-07-28 15:11:57,773 | INFO     | mean y: 2515123.1612903224
[2025-07-28 17:12:57] 2025-07-28 15:11:57,773 | INFO     | -- intersect: 78852534.15342285
[2025-07-28 17:12:57] 2025-07-28 15:11:57,773 | INFO     | intersect: 78852534.15342285
[2025-07-28 17:12:57] 2025-07-28 15:11:57,774 | INFO     | chi2: 1.6770452278692207
[2025-07-28 17:12:57] 2025-07-28 15:11:57,774 | INFO     | sum of square deviations: 4449281562.0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,776 | INFO     | sum of deviations: -358692871.0000157
[2025-07-28 17:12:57] 2025-07-28 15:11:57,776 | INFO     | mean x: 1753707754.0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,776 | INFO     | mean y: 2515040.111111111
[2025-07-28 17:12:57] 2025-07-28 15:11:57,777 | INFO     | -- intersect: 143895723.80389315
[2025-07-28 17:12:57] 2025-07-28 15:11:57,777 | INFO     | intersect: 143895723.80389315
[2025-07-28 17:12:57] 2025-07-28 15:11:57,777 | INFO     | chi2: 1.676795379199978
[2025-07-28 17:12:57] 2025-07-28 15:11:57,777 | INFO     | current chi2=1.676795379199978 (change=0.014898147354097982 %)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,777 | INFO     | right removable region: 242
[2025-07-28 17:12:57] 2025-07-28 15:11:57,786 | INFO     | sum of square deviations: 4449281562.0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,788 | INFO     | sum of deviations: -38952414674.999985
[2025-07-28 17:12:57] 2025-07-28 15:11:57,788 | INFO     | mean x: 1753708059.0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,789 | INFO     | mean y: 2536013.4567901236
[2025-07-28 17:12:57] 2025-07-28 15:11:57,789 | INFO     | -- intersect: 15355838019.8937
[2025-07-28 17:12:57] 2025-07-28 15:11:57,789 | INFO     | intersect: 15355838019.8937
[2025-07-28 17:12:57] 2025-07-28 15:11:57,789 | INFO     | chi2: 0.1908124301359054
[2025-07-28 17:12:57] 2025-07-28 15:11:57,789 | INFO     | current chi2=0.1908124301359054 (change=88.62210589404657 %)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,790 | INFO     | sum of square deviations: 4180243959.5
[2025-07-28 17:12:57] 2025-07-28 15:11:57,792 | INFO     | sum of deviations: -37118165628.5
[2025-07-28 17:12:57] 2025-07-28 15:11:57,792 | INFO     | mean x: 1753708211.5
[2025-07-28 17:12:57] 2025-07-28 15:11:57,792 | INFO     | mean y: 2534943.718487395
[2025-07-28 17:12:57] 2025-07-28 15:11:57,792 | INFO     | -- intersect: 15574456699.764385
[2025-07-28 17:12:57] 2025-07-28 15:11:57,792 | INFO     | intersect: 15574456699.764385
[2025-07-28 17:12:57] 2025-07-28 15:11:57,793 | INFO     | chi2: 0.17633803610820675
[2025-07-28 17:12:57] 2025-07-28 15:11:57,793 | INFO     | current chi2=0.17633803610820675 (change=7.585666204968576 %)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,793 | INFO     | left removable region: 20
[2025-07-28 17:12:57] 2025-07-28 15:11:57,793 | INFO     | sum of square deviations: 3392567795.5
[2025-07-28 17:12:57] 2025-07-28 15:11:57,795 | INFO     | sum of deviations: -22067836013.499996
[2025-07-28 17:12:57] 2025-07-28 15:11:57,795 | INFO     | mean x: 1753708333.5
[2025-07-28 17:12:57] 2025-07-28 15:11:57,795 | INFO     | mean y: 2526196.1396396398
[2025-07-28 17:12:57] 2025-07-28 15:11:57,795 | INFO     | -- intersect: 11409976320.06049
[2025-07-28 17:12:57] 2025-07-28 15:11:57,796 | INFO     | intersect: 11409976320.06049
[2025-07-28 17:12:57] 2025-07-28 15:11:57,796 | INFO     | chi2: 0.14068580925835403
[2025-07-28 17:12:57] 2025-07-28 15:11:57,796 | INFO     | -- intersect: 11409976320.06049
[2025-07-28 17:12:57] 2025-07-28 15:11:57,796 | INFO     | current memory leak: -6.50 B/s (using 222 data points, chi2=0.14)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,797 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,797 | INFO     | ..............................
[2025-07-28 17:12:57] 2025-07-28 15:11:57,797 | INFO     | . Timing measurements:
[2025-07-28 17:12:57] 2025-07-28 15:11:57,797 | INFO     | . get job = 0 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,797 | INFO     | . initial setup = 2 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,797 | INFO     | . payload setup = 12 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,798 | INFO     | . stage-in = 0 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,798 | INFO     | . payload execution = 15131 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,798 | INFO     | . stage-out = 2 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,798 | INFO     | . log creation = 0 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,798 | INFO     | ..............................
[2025-07-28 17:12:57] 2025-07-28 15:11:57,918 | INFO     | 
[2025-07-28 17:12:57] 2025-07-28 15:11:57,918 | INFO     | job summary report
[2025-07-28 17:12:57] 2025-07-28 15:11:57,918 | INFO     | --------------------------------------------------
[2025-07-28 17:12:57] 2025-07-28 15:11:57,918 | INFO     | PanDA job id: 6747577492
[2025-07-28 17:12:57] 2025-07-28 15:11:57,918 | INFO     | task id: 45743349
[2025-07-28 17:12:57] 2025-07-28 15:11:57,918 | INFO     | errors: (none)
[2025-07-28 17:12:57] 2025-07-28 15:11:57,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | pilot state: finished 
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | transexitcode: 0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | exeerrorcode: 0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | exeerrordiag: 
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | exitcode: 0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | exitmsg: OK
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | cpuconsumptiontime: 58214 s
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | nevents: 400
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | neventsw: 0
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | pid: 11719
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | pgrp: 11719
[2025-07-28 17:12:57] 2025-07-28 15:11:57,919 | INFO     | corecount: 8
[2025-07-28 17:12:57] 2025-07-28 15:11:57,920 | INFO     | event service: False
[2025-07-28 17:12:57] 2025-07-28 15:11:57,920 | INFO     | sizes: {0: 2397248, 1: 2397503, 7: 2397765, 12: 2397793, 15148: 2428350, 15150: 2431966, 15175: 2432104}
[2025-07-28 17:12:57] 2025-07-28 15:11:57,920 | INFO     | --------------------------------------------------
[2025-07-28 17:12:57] 2025-07-28 15:11:57,920 | INFO     | 
[2025-07-28 17:12:57] 2025-07-28 15:11:57,920 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-28 17:12:57] 2025-07-28 15:11:58,034 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:12:57] 2025-07-28 15:11:58,037 | INFO     | job 6747577492 has completed (purged errors)
[2025-07-28 17:12:57] 2025-07-28 15:11:58,037 | INFO     | overall cleanup function is called
[2025-07-28 17:12:57] 2025-07-28 15:11:59,046 | INFO     | --- collectZombieJob: --- 10, [11719]
[2025-07-28 17:12:57] 2025-07-28 15:11:59,046 | INFO     | zombie collector waiting for pid 11719
[2025-07-28 17:12:57] 2025-07-28 15:11:59,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:12:57] 2025-07-28 15:11:59,046 | INFO     | collected zombie processes
[2025-07-28 17:12:57] 2025-07-28 15:11:59,046 | INFO     | will attempt to kill all subprocesses of pid=11719
[2025-07-28 17:12:57] 2025-07-28 15:11:59,154 | INFO     | process IDs to be killed: [11719] (in reverse order)
[2025-07-28 17:12:57] 2025-07-28 15:11:59,221 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:12:57] 2025-07-28 15:11:59,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:12:57] 2025-07-28 15:11:59,225 | INFO     | did not find any defunct processes belonging to 11719
[2025-07-28 17:12:57] 2025-07-28 15:11:59,229 | INFO     | did not find any defunct processes belonging to 11719
[2025-07-28 17:12:57] 2025-07-28 15:11:59,230 | INFO     | ready for new job
[2025-07-28 17:12:57] 2025-07-28 15:11:59,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:12:57] 2025-07-28 15:11:59,232 | INFO     | ***************************************
[2025-07-28 17:12:57] 2025-07-28 15:11:59,232 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:12:57] 2025-07-28 15:11:59,232 | INFO     | ***************************************
[2025-07-28 17:12:57] 2025-07-28 15:11:59,232 | INFO     | 
[2025-07-28 17:12:57] 2025-07-28 15:11:59,233 | INFO     | pilot is running in a VM
[2025-07-28 17:12:57] 2025-07-28 15:11:59,233 | INFO     | architecture information:
[2025-07-28 17:12:57] 2025-07-28 15:11:59,233 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:12:57] 2025-07-28 15:11:59,478 | INFO     | cat /etc/os-release:
[2025-07-28 17:12:57] NAME="CentOS Linux"
[2025-07-28 17:12:57] VERSION="7 (Core)"
[2025-07-28 17:12:57] ID="centos"
[2025-07-28 17:12:57] ID_LIKE="rhel fedora"
[2025-07-28 17:12:57] VERSION_ID="7"
[2025-07-28 17:12:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:12:57] ANSI_COLOR="0;31"
[2025-07-28 17:12:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:12:57] HOME_URL="https://www.centos.org/"
[2025-07-28 17:12:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:12:57] 
[2025-07-28 17:12:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:12:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:12:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:12:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:12:57] 
[2025-07-28 17:12:57] 2025-07-28 15:11:59,479 | INFO     | ***************************************
[2025-07-28 17:12:57] 2025-07-28 15:11:59,989 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-28 17:12:57] 2025-07-28 15:12:00,029 | INFO     | sufficient remaining disk space (497244176384 B)
[2025-07-28 17:12:57] 2025-07-28 15:12:00,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:12:57] 2025-07-28 15:12:00,030 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:12:57] 2025-07-28 15:12:00,030 | INFO     | update_server=False
[2025-07-28 17:12:57] 2025-07-28 15:12:00,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:12:57] 2025-07-28 15:12:00,261 | INFO     | all data control threads have been joined
[2025-07-28 17:12:57] 2025-07-28 15:12:00,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:12:57] 2025-07-28 15:12:00,609 | INFO     | aborting loop
[2025-07-28 17:12:57] 2025-07-28 15:12:00,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:12:57] 2025-07-28 15:12:01,037 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,164 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,203 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,208 | INFO     | all payload control threads have been joined
[2025-07-28 17:12:57] 2025-07-28 15:12:01,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,266 | INFO     | [data] control thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:12:57] 2025-07-28 15:12:01,376 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,457 | INFO     | [job] validate thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,614 | INFO     | all job control threads have been joined
[2025-07-28 17:12:57] 2025-07-28 15:12:01,614 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,789 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:01,997 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:02,214 | INFO     | [payload] control thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:02,279 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:02,619 | INFO     | [job] control thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:02,721 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:02,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:12:57] 2025-07-28 15:12:03,939 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:05,350 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:12:57] 2025-07-28 15:12:07,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066001901376)>', '<ExcThread(monitor, started 140065552443136)>']
[2025-07-28 17:12:57] 2025-07-28 15:12:12,228 | INFO     | all workflow threads have been joined
[2025-07-28 17:12:57] 2025-07-28 15:12:12,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:12:57] 2025-07-28 15:12:12,228 | INFO     | traces error code: 0
[2025-07-28 17:12:57] 2025-07-28 15:12:12,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:12:57] 2025-07-28 15:12:30,089 | INFO     | PID=5117 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-28 17:12:57] 2025-07-28 15:12:30,089 | INFO     | .. there are 9 such processes running
[2025-07-28 17:12:57] 2025-07-28 15:12:30,089 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:12:57] 2025-07-28 15:12:30,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:12:57] 2025-07-28 15:12:30,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:12:57] 2025-07-28 15:12:30,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:12:57] 2025-07-28 15:12:30,090 | INFO     | [monitor] control thread has ended
[2025-07-28 17:12:57] 2025-07-28 15:12:30,315 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:12:57] 2025-07-28 15:12:30,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:12:57] 2025-07-28 15:12:30,327 [wrapper] pilotpid: 5117
[2025-07-28 17:12:57] 2025-07-28 15:12:30,330 [wrapper] Pilot exit status: 0
[2025-07-28 17:12:57] 2025-07-28 15:12:30,348 [wrapper] pandaids: 6747577492
[2025-07-28 17:12:57] 2025-07-28 15:12:30,387 [wrapper] cleanup supervisor_pilot 14055 5118
[2025-07-28 17:12:57] 2025-07-28 15:12:30,407 [wrapper] Test setup, not cleaning
[2025-07-28 17:12:57] 2025-07-28 15:12:30,410 [wrapper] apfmon messages muted
[2025-07-28 17:12:57] 2025-07-28 15:12:30,414 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:12:57] 2025-07-28 15:12:30,417 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:12:57]  *** Error codes and diagnostics ***
[2025-07-28 17:12:57]     "exeErrorCode": 0,
[2025-07-28 17:12:57]     "exeErrorDiag": "",
[2025-07-28 17:12:57]     "pilotErrorCode": 0,
[2025-07-28 17:12:57]     "pilotErrorDiag": "",
[2025-07-28 17:12:57]  *** Listing of results directory ***
[2025-07-28 17:12:57] total 358296
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc    530466 Jul 27 19:29 pilot3.tar.gz
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc      5112 Jul 27 19:34 queuedata.json
[2025-07-28 17:12:57] -rwx------. 1 boinc boinc     36292 Jul 27 19:35 runpilot2-wrapper.sh
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc       100 Jul 28 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:12:57] -rwxr-xr-x. 1 boinc boinc      7986 Jul 28 12:58 run_atlas
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc       105 Jul 28 12:58 job.xml
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc      6391 Jul 28 12:58 init_data.xml
[2025-07-28 17:12:57] -rw-r--r--. 2 boinc boinc 149598272 Jul 28 12:58 EVNT.45743347._002887.pool.root.1
[2025-07-28 17:12:57] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:58 start_atlas.sh
[2025-07-28 17:12:57] drwxrwx--x. 2 boinc boinc        68 Jul 28 12:58 shared
[2025-07-28 17:12:57] -rw-r--r--. 2 boinc boinc    542895 Jul 28 12:58 input.tar.gz
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc         0 Jul 28 12:58 boinc_lockfile
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc      2563 Jul 28 12:58 pandaJob.out
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc    978460 Jul 28 12:58 agis_schedconf.cvmfs.json
[2025-07-28 17:12:57] drwx------. 4 boinc boinc      4096 Jul 28 12:58 pilot3
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc 210013488 Jul 28 17:10 HITS.45743349._053007.pool.root.1
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc       531 Jul 28 17:11 boinc_task_state.xml
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc      1014 Jul 28 17:11 memory_monitor_summary.json
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc   1589827 Jul 28 17:11 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc    399704 Jul 28 17:11 log.45743349._053007.job.log.tgz.1
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc        95 Jul 28 17:11 pilot_heartbeat.json
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc      7772 Jul 28 17:11 heartbeat.json
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc       819 Jul 28 17:12 pilotlog.txt
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc   1311105 Jul 28 17:12 log.45743349._053007.job.log.1
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc       357 Jul 28 17:12 output.list
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc       620 Jul 28 17:12 runtime_log
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc   1730560 Jul 28 17:12 result.tar.gz
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc       656 Jul 28 17:12 UXkNDmuSK07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmazVLDmEl7eNm.diag
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc      8660 Jul 28 17:12 runtime_log.err
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc      8192 Jul 28 17:12 boinc_mmap_file
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc        28 Jul 28 17:12 wrapper_checkpoint.txt
[2025-07-28 17:12:57] -rw-r--r--. 1 boinc boinc     20797 Jul 28 17:12 stderr.txt
[2025-07-28 17:12:57] HITS file was successfully produced:
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc 210013488 Jul 28 17:10 shared/HITS.pool.root.1
[2025-07-28 17:12:57]  *** Contents of shared directory: ***
[2025-07-28 17:12:57] total 353428
[2025-07-28 17:12:57] -rw-r--r--. 2 boinc boinc 149598272 Jul 28 12:58 ATLAS.root_0
[2025-07-28 17:12:57] -rw-r--r--. 2 boinc boinc     15095 Jul 28 12:58 start_atlas.sh
[2025-07-28 17:12:57] -rw-r--r--. 2 boinc boinc    542895 Jul 28 12:58 input.tar.gz
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc 210013488 Jul 28 17:10 HITS.pool.root.1
[2025-07-28 17:12:57] -rw-------. 1 boinc boinc   1730560 Jul 28 17:12 result.tar.gz
17:12:59 (1113): run_atlas exited; CPU time 58387.558686
17:12:59 (1113): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN