Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:45:20 (3798916): wrapper (7.7.26015): starting
18:45:20 (3798916): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:45:20] Arguments: --nthreads 8
[2025-07-27 18:45:20] Threads: 8
[2025-07-27 18:45:20] Checking for CVMFS
[2025-07-27 18:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:45:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:45:20] 2.12.6.0 2956151 18982 546132 148827 2 878 19437255 32935936 31300 16776704 0 196122477 99.653 208882449 28128 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 18:45:20] CVMFS is ok
[2025-07-27 18:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:45:20] Further information can be found at the LHC@home message board.
[2025-07-27 18:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:45:20] Checking for apptainer binary...
[2025-07-27 18:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:45:20] Running /usr/bin/apptainer --version
[2025-07-27 18:45:20] apptainer version 1.4.1-1.el9
[2025-07-27 18:45:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:45:21] c7-9-15.aglt2.org
[2025-07-27 18:45:21] apptainer works
[2025-07-27 18:45:21] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:45:21] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:45:21] Starting ATLAS job with PandaID=6747548858
[2025-07-27 18:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:51:53]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:51:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/53/log.45743349._052725.job.log.tgz.1
[2025-07-27 19:51:53]  workdir=None
[2025-07-27 19:51:53] ]
[2025-07-27 19:51:53] 2025-07-27 23:51:02,834 | INFO     | transferring file log.45743349._052725.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747548858/log.45743349._052725.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:51:53] 2025-07-27 23:51:02,834 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747548858/log.45743349._052725.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._052725.job
[2025-07-27 19:51:53] 2025-07-27 23:51:02,876 | INFO     | adding to output.list: log.45743349._052725.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/53/log.45743349._052725.job.log.tg
[2025-07-27 19:51:53] 2025-07-27 23:51:02,877 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:51:53] 2025-07-27 23:51:02,877 | INFO     | summary of transferred files:
[2025-07-27 19:51:53] 2025-07-27 23:51:02,877 | INFO     |  -- lfn=log.45743349._052725.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:51:53] 2025-07-27 23:51:02,877 | INFO     | stage-out finished correctly
[2025-07-27 19:51:53] 2025-07-27 23:51:05,519 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:51:53] 2025-07-27 23:51:05,580 | INFO     | job 6747548858 has state=finished
[2025-07-27 19:51:53] 2025-07-27 23:51:05,580 | INFO     | preparing for final server update for job 6747548858 in state='finished'
[2025-07-27 19:51:53] 2025-07-27 23:51:05,580 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:51:53] 2025-07-27 23:51:05,580 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:51:53] 2025-07-27 23:51:05,580 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:51:53] 2025-07-27 23:51:05,580 | INFO     | job 6747548858 has finished - writing final server update
[2025-07-27 19:51:53] 2025-07-27 23:51:05,580 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:51:53] 2025-07-27 23:51:05,584 | INFO     | executing command: lscpu
[2025-07-27 19:51:53] 2025-07-27 23:51:05,663 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:51:53] 2025-07-27 23:51:05,686 | WARNING  | process 3815924 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:51:53] 2025-07-27 23:51:05,686 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747548858/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:51:53] 2025-07-27 23:51:06,180 | INFO     | number of running child processes to parent process 3815924: 1
[2025-07-27 19:51:53] 2025-07-27 23:51:06,181 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:51:53] 2025-07-27 23:51:08,686 | INFO     | monitor loop #272: job 0:6747548858 is in state 'finished'
[2025-07-27 19:51:53] 2025-07-27 23:51:08,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:51:53] 2025-07-27 23:51:11,194 | INFO     | monitor loop #273: job 0:6747548858 is in state 'finished'
[2025-07-27 19:51:53] 2025-07-27 23:51:11,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:51:53] 2025-07-27 23:51:13,701 | INFO     | monitor loop #274: job 0:6747548858 is in state 'finished'
[2025-07-27 19:51:53] 2025-07-27 23:51:13,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:51:53] 2025-07-27 23:51:14,012 | INFO     | PID=3805813 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 19:51:53] 2025-07-27 23:51:14,012 | INFO     | .. there are 32 such processes running
[2025-07-27 19:51:53] 2025-07-27 23:51:16,206 | INFO     | monitor loop #275: job 0:6747548858 is in state 'finished'
[2025-07-27 19:51:53] 2025-07-27 23:51:16,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:51:53] 2025-07-27 23:51:18,711 | INFO     | monitor loop #276: job 0:6747548858 is in state 'finished'
[2025-07-27 19:51:53] 2025-07-27 23:51:18,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:51:53] 2025-07-27 23:51:18,811 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 19:51:53] 2025-07-27 23:51:18,819 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3682.933953125
[2025-07-27 19:51:53] 2025-07-27 23:51:18,831 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747548858/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:51:53] 2025-07-27 23:51:18,832 | INFO     | extracted standard info from prmon json
[2025-07-27 19:51:53] 2025-07-27 23:51:18,832 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:51:53] 2025-07-27 23:51:18,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:51:53] 2025-07-27 23:51:18,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:51:53] 2025-07-27 23:51:18,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | sum of square deviations: 57407588.0
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | sum of deviations: -816063795.0
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | mean x: 1753658385.0
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | mean y: 2179255.3333333335
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | -- intersect: 24930889320.571938
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | intersect: 24930889320.571938
[2025-07-27 19:51:53] 2025-07-27 23:51:18,833 | INFO     | chi2: 0.020451409049921807
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | -- intersect: 24930889320.571938
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | current memory leak: -14.22 B/s (using 57 data points, chi2=0.02)
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | could have reported an average CPU frequency of 3691 MHz (6 samples)
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | ..............................
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . Timing measurements:
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . get job = 0 s
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . initial setup = 3 s
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . payload setup = 9 s
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . stage-in = 0 s
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . payload execution = 3893 s
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . stage-out = 0 s
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | . log creation = 0 s
[2025-07-27 19:51:53] 2025-07-27 23:51:18,834 | INFO     | ..............................
[2025-07-27 19:51:53] 2025-07-27 23:51:19,029 | INFO     | 
[2025-07-27 19:51:53] 2025-07-27 23:51:19,029 | INFO     | job summary report
[2025-07-27 19:51:53] 2025-07-27 23:51:19,029 | INFO     | --------------------------------------------------
[2025-07-27 19:51:53] 2025-07-27 23:51:19,029 | INFO     | PanDA job id: 6747548858
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | task id: 45743349
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | errors: (none)
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | pilot state: finished 
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | transexitcode: 0
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | exeerrorcode: 0
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | exeerrordiag: 
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | exitcode: 0
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | exitmsg: OK
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | cpuconsumptiontime: 27543 s
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | nevents: 400
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | neventsw: 0
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | pid: 3815924
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | pgrp: 3815924
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | corecount: 8
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | event service: False
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | sizes: {0: 2397473, 1: 2397473, 7: 2397763, 11: 2397791, 3906: 2423661, 3907: 2432659, 3910: 2432843, 3923: 2433037}
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | --------------------------------------------------
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | 
[2025-07-27 19:51:53] 2025-07-27 23:51:19,030 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 19:51:53] 2025-07-27 23:51:19,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:51:53] 2025-07-27 23:51:19,063 | INFO     | job 6747548858 has completed (purged errors)
[2025-07-27 19:51:53] 2025-07-27 23:51:19,064 | INFO     | overall cleanup function is called
[2025-07-27 19:51:53] 2025-07-27 23:51:20,073 | INFO     | --- collectZombieJob: --- 10, [3815924]
[2025-07-27 19:51:53] 2025-07-27 23:51:20,073 | INFO     | zombie collector waiting for pid 3815924
[2025-07-27 19:51:53] 2025-07-27 23:51:20,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:51:53] 2025-07-27 23:51:20,073 | INFO     | collected zombie processes
[2025-07-27 19:51:53] 2025-07-27 23:51:20,073 | INFO     | will attempt to kill all subprocesses of pid=3815924
[2025-07-27 19:51:53] 2025-07-27 23:51:20,440 | INFO     | process IDs to be killed: [3815924] (in reverse order)
[2025-07-27 19:51:53] 2025-07-27 23:51:20,603 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:51:53] 2025-07-27 23:51:20,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:51:53] 2025-07-27 23:51:20,633 | INFO     | did not find any defunct processes belonging to 3815924
[2025-07-27 19:51:53] 2025-07-27 23:51:20,667 | INFO     | did not find any defunct processes belonging to 3815924
[2025-07-27 19:51:53] 2025-07-27 23:51:20,667 | INFO     | ready for new job
[2025-07-27 19:51:53] 2025-07-27 23:51:20,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:51:53] 2025-07-27 23:51:20,669 | INFO     | ***************************************
[2025-07-27 19:51:53] 2025-07-27 23:51:20,669 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:51:53] 2025-07-27 23:51:20,669 | INFO     | ***************************************
[2025-07-27 19:51:53] 2025-07-27 23:51:20,669 | INFO     | 
[2025-07-27 19:51:53] 2025-07-27 23:51:20,686 | INFO     | architecture information:
[2025-07-27 19:51:53] 2025-07-27 23:51:20,686 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:51:53] 2025-07-27 23:51:20,746 | INFO     | cat /etc/os-release:
[2025-07-27 19:51:53] NAME="CentOS Linux"
[2025-07-27 19:51:53] VERSION="7 (Core)"
[2025-07-27 19:51:53] ID="centos"
[2025-07-27 19:51:53] ID_LIKE="rhel fedora"
[2025-07-27 19:51:53] VERSION_ID="7"
[2025-07-27 19:51:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:51:53] ANSI_COLOR="0;31"
[2025-07-27 19:51:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:51:53] HOME_URL="https://www.centos.org/"
[2025-07-27 19:51:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:51:53] 
[2025-07-27 19:51:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:51:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:51:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:51:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:51:53] 
[2025-07-27 19:51:53] 2025-07-27 23:51:20,746 | INFO     | ***************************************
[2025-07-27 19:51:53] 2025-07-27 23:51:21,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 19:51:53] 2025-07-27 23:51:21,313 | INFO     | sufficient remaining disk space (75396808704 B)
[2025-07-27 19:51:53] 2025-07-27 23:51:21,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:51:53] 2025-07-27 23:51:21,314 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:51:53] 2025-07-27 23:51:21,314 | INFO     | update_server=False
[2025-07-27 19:51:53] 2025-07-27 23:51:21,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:51:53] 2025-07-27 23:51:21,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:51:53] 2025-07-27 23:51:21,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:51:53] 2025-07-27 23:51:21,738 | INFO     | all payload control threads have been joined
[2025-07-27 19:51:53] 2025-07-27 23:51:21,809 | INFO     | all job control threads have been joined
[2025-07-27 19:51:53] 2025-07-27 23:51:22,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:51:53] 2025-07-27 23:51:22,220 | INFO     | aborting loop
[2025-07-27 19:51:53] 2025-07-27 23:51:22,320 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:22,384 | INFO     | all data control threads have been joined
[2025-07-27 19:51:53] 2025-07-27 23:51:22,452 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:22,673 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:22,744 | INFO     | [payload] control thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:22,815 | INFO     | [job] control thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:22,816 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,033 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,225 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,321 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,390 | INFO     | [data] control thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,485 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,657 | INFO     | [job] validate thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,708 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:23,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:51:53] 2025-07-27 23:51:24,905 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:25,322 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:31,726 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:51:53] 2025-07-27 23:51:32,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:51:53] 2025-07-27 23:51:34,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379436377920)>', '<ExcThread(monitor, started 140378707580672)>']
[2025-07-27 19:51:53] 2025-07-27 23:51:39,545 | INFO     | all workflow threads have been joined
[2025-07-27 19:51:53] 2025-07-27 23:51:39,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:51:53] 2025-07-27 23:51:39,545 | INFO     | traces error code: 0
[2025-07-27 19:51:53] 2025-07-27 23:51:39,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:51:53] 2025-07-27 23:51:52,680 | INFO     | PID=3805813 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:51:53] 2025-07-27 23:51:52,680 | INFO     | .. there are 32 such processes running
[2025-07-27 19:51:53] 2025-07-27 23:51:52,681 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:51:53] 2025-07-27 23:51:52,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:51:53] 2025-07-27 23:51:52,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:51:53] 2025-07-27 23:51:52,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:51:53] 2025-07-27 23:51:52,681 | INFO     | [monitor] control thread has ended
[2025-07-27 19:51:53] 2025-07-27 23:51:52,863 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:51:53] 2025-07-27 23:51:52,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:51:53] 2025-07-27 23:51:52,889 [wrapper] pilotpid: 3805813
[2025-07-27 19:51:53] 2025-07-27 23:51:52,901 [wrapper] Pilot exit status: 0
[2025-07-27 19:51:53] 2025-07-27 23:51:52,944 [wrapper] pandaids: 6747548858
[2025-07-27 19:51:53] 2025-07-27 23:51:53,066 [wrapper] cleanup supervisor_pilot   37480 3805814
[2025-07-27 19:51:53] 2025-07-27 23:51:53,070 [wrapper] Test setup, not cleaning
[2025-07-27 19:51:53] 2025-07-27 23:51:53,077 [wrapper] apfmon messages muted
[2025-07-27 19:51:53] 2025-07-27 23:51:53,093 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:51:53] 2025-07-27 23:51:53,101 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:51:53]  *** Error codes and diagnostics ***
[2025-07-27 19:51:53]     "exeErrorCode": 0,
[2025-07-27 19:51:53]     "exeErrorDiag": "",
[2025-07-27 19:51:53]     "pilotErrorCode": 0,
[2025-07-27 19:51:53]     "pilotErrorDiag": "",
[2025-07-27 19:51:53]  *** Listing of results directory ***
[2025-07-27 19:51:53] total 434972
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:06 queuedata.json
[2025-07-27 19:51:53] -rwx------. 1 boincer umatlas     36292 Jul 27 13:07 runpilot2-wrapper.sh
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:51:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:45 run_atlas
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:45 job.xml
[2025-07-27 19:51:53] -rw-r--r--. 2 boincer umatlas 230551553 Jul 27 18:45 EVNT.45743347._002819.pool.root.1
[2025-07-27 19:51:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:45 start_atlas.sh
[2025-07-27 19:51:53] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:45 shared
[2025-07-27 19:51:53] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 18:45 input.tar.gz
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:45 boinc_lockfile
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 18:45 pandaJob.out
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas    980109 Jul 27 18:45 agis_schedconf.cvmfs.json
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:45 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:51:53] drwx------. 4 boincer umatlas      4096 Jul 27 18:45 pilot3
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas      7160 Jul 27 19:45 init_data.xml
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas 209631799 Jul 27 19:50 HITS.45743349._052725.pool.root.1
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:50 boinc_task_state.xml
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas      1035 Jul 27 19:50 memory_monitor_summary.json
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas    288917 Jul 27 19:51 log.45743349._052725.job.log.tgz.1
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas      7769 Jul 27 19:51 heartbeat.json
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:51 wrapper_checkpoint.txt
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:51 boinc_mmap_file
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas       823 Jul 27 19:51 pilotlog.txt
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas        95 Jul 27 19:51 pilot_heartbeat.json
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas    389023 Jul 27 19:51 log.45743349._052725.job.log.1
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas       357 Jul 27 19:51 output.list
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:51 runtime_log
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas    696320 Jul 27 19:51 result.tar.gz
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:51 runtime_log.err
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas       653 Jul 27 19:51 fpsNDmU1J07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8wVLDmW1oeWn.diag
[2025-07-27 19:51:53] -rw-r--r--. 1 boincer umatlas     22439 Jul 27 19:51 stderr.txt
[2025-07-27 19:51:53] HITS file was successfully produced:
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas 209631799 Jul 27 19:50 shared/HITS.pool.root.1
[2025-07-27 19:51:53]  *** Contents of shared directory: ***
[2025-07-27 19:51:53] total 431104
[2025-07-27 19:51:53] -rw-r--r--. 2 boincer umatlas 230551553 Jul 27 18:45 ATLAS.root_0
[2025-07-27 19:51:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:45 start_atlas.sh
[2025-07-27 19:51:53] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 18:45 input.tar.gz
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas 209631799 Jul 27 19:50 HITS.pool.root.1
[2025-07-27 19:51:53] -rw-------. 1 boincer umatlas    696320 Jul 27 19:51 result.tar.gz
19:51:55 (3798916): run_atlas exited; CPU time 27594.420468
19:51:55 (3798916): called boinc_finish(0)

</stderr_txt>
]]>

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