Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:05:27 (1340328): wrapper (7.7.26015): starting
20:05:27 (1340328): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 20:05:27] Arguments: --nthreads 12
[2025-07-27 20:05:27] Threads: 12
[2025-07-27 20:05:27] Checking for CVMFS
[2025-07-27 20:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:05:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:05:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:05:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:05:28] 2.13.0.0 1190652 19062 346952 148828 3 313 25670717 32935936 7278 16776704 0 34339337 99.718 59386550 29111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 20:05:28] CVMFS is ok
[2025-07-27 20:05:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:05:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:05:28] Further information can be found at the LHC@home message board.
[2025-07-27 20:05:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:05:28] Checking for apptainer binary...
[2025-07-27 20:05:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:05:28] Running /usr/bin/apptainer --version
[2025-07-27 20:05:28] apptainer version 1.4.1-1.el9
[2025-07-27 20:05:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:05:28] c6-1-26-3.aglt2.org
[2025-07-27 20:05:28] apptainer works
[2025-07-27 20:05:28] Set ATHENA_PROC_NUMBER=12
[2025-07-27 20:05:28] Set ATHENA_CORE_NUMBER=12
[2025-07-27 20:05:28] Starting ATLAS job with PandaID=6747499807
[2025-07-27 20:05:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:21:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:21:56]  is_altstaged=None
[2025-07-27 21:21:56]  is_tar=False
[2025-07-27 21:21:56]  lfn=log.45743349._051192.job.log.tgz.1
[2025-07-27 21:21:56]  mtime=0
[2025-07-27 21:21:56]  protocol_id=None
[2025-07-27 21:21:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 21:21:56]  replicas=None
[2025-07-27 21:21:56]  scope=mc23_13p6TeV
[2025-07-27 21:21:56]  status=None
[2025-07-27 21:21:56]  status_code=0
[2025-07-27 21:21:56]  storage_token=
[2025-07-27 21:21:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747499807/log.45743349._051192.job.log.tgz.1
[2025-07-27 21:21:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/ee/log.45743349._051192.job.log.tgz.1
[2025-07-27 21:21:56]  workdir=None
[2025-07-27 21:21:56] ]
[2025-07-27 21:21:56] 2025-07-28 01:21:17,526 | INFO     | transferring file log.45743349._051192.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747499807/log.45743349._051192.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 21:21:56] 2025-07-28 01:21:17,527 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747499807/log.45743349._051192.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._051192.job
[2025-07-27 21:21:56] 2025-07-28 01:21:17,544 | INFO     | adding to output.list: log.45743349._051192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/ee/log.45743349._051192.job.log.tg
[2025-07-27 21:21:56] 2025-07-28 01:21:17,546 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:21:56] 2025-07-28 01:21:17,546 | INFO     | summary of transferred files:
[2025-07-27 21:21:56] 2025-07-28 01:21:17,546 | INFO     |  -- lfn=log.45743349._051192.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:21:56] 2025-07-28 01:21:17,546 | INFO     | stage-out finished correctly
[2025-07-27 21:21:56] 2025-07-28 01:21:19,967 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:21:56] 2025-07-28 01:21:20,154 | INFO     | job 6747499807 has state=finished
[2025-07-27 21:21:56] 2025-07-28 01:21:20,154 | INFO     | preparing for final server update for job 6747499807 in state='finished'
[2025-07-27 21:21:56] 2025-07-28 01:21:20,154 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:21:56] 2025-07-28 01:21:20,154 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:21:56] 2025-07-28 01:21:20,155 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:21:56] 2025-07-28 01:21:20,155 | INFO     | job 6747499807 has finished - writing final server update
[2025-07-27 21:21:56] 2025-07-28 01:21:20,155 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:21:56] 2025-07-28 01:21:20,156 | INFO     | executing command: lscpu
[2025-07-27 21:21:56] 2025-07-28 01:21:20,205 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:21:56] 2025-07-28 01:21:21,883 | WARNING  | process 1354022 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 21:21:56] 2025-07-28 01:21:21,884 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747499807/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:21:56] 2025-07-28 01:21:22,117 | INFO     | number of running child processes to parent process 1354022: 1
[2025-07-27 21:21:56] 2025-07-28 01:21:22,118 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:21:56] 2025-07-28 01:21:24,478 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 21:21:56] 2025-07-28 01:21:24,481 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2601.5503035714282
[2025-07-27 21:21:56] 2025-07-28 01:21:24,490 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747499807/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:21:56] 2025-07-28 01:21:24,491 | INFO     | extracted standard info from prmon json
[2025-07-27 21:21:56] 2025-07-28 01:21:24,491 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:21:56] 2025-07-28 01:21:24,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:21:56] 2025-07-28 01:21:24,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:21:56] 2025-07-28 01:21:24,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:21:56] 2025-07-28 01:21:24,493 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:21:56] 2025-07-28 01:21:24,493 | INFO     | sum of square deviations: 93240818.0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,493 | INFO     | sum of deviations: -5958866923.0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,493 | INFO     | mean x: 1753663489.0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,493 | INFO     | mean y: 2455294.776119403
[2025-07-27 21:21:56] 2025-07-28 01:21:24,494 | INFO     | -- intersect: 112076197061.76572
[2025-07-27 21:21:56] 2025-07-28 01:21:24,494 | INFO     | intersect: 112076197061.76572
[2025-07-27 21:21:56] 2025-07-28 01:21:24,494 | INFO     | chi2: 0.1382251560359551
[2025-07-27 21:21:56] 2025-07-28 01:21:24,494 | INFO     | -- intersect: 112076197061.76572
[2025-07-27 21:21:56] 2025-07-28 01:21:24,494 | INFO     | current memory leak: -63.91 B/s (using 67 data points, chi2=0.14)
[2025-07-27 21:21:56] 2025-07-28 01:21:24,494 | INFO     | could have reported an average CPU frequency of 2630 MHz (6 samples)
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | ..............................
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . Timing measurements:
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . get job = 0 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . initial setup = 2 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . payload setup = 8 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . stage-in = 0 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . payload execution = 4506 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . stage-out = 0 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | . log creation = 0 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,495 | INFO     | ..............................
[2025-07-27 21:21:56] 2025-07-28 01:21:24,561 | INFO     | 
[2025-07-27 21:21:56] 2025-07-28 01:21:24,561 | INFO     | job summary report
[2025-07-27 21:21:56] 2025-07-28 01:21:24,561 | INFO     | --------------------------------------------------
[2025-07-27 21:21:56] 2025-07-28 01:21:24,561 | INFO     | PanDA job id: 6747499807
[2025-07-27 21:21:56] 2025-07-28 01:21:24,561 | INFO     | task id: 45743349
[2025-07-27 21:21:56] 2025-07-28 01:21:24,561 | INFO     | errors: (none)
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | pilot state: finished 
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | transexitcode: 0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | exeerrorcode: 0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | exeerrordiag: 
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | exitcode: 0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | exitmsg: OK
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | cpuconsumptiontime: 49288 s
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | nevents: 400
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | neventsw: 0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | pid: 1354022
[2025-07-27 21:21:56] 2025-07-28 01:21:24,562 | INFO     | pgrp: 1354022
[2025-07-27 21:21:56] 2025-07-28 01:21:24,563 | INFO     | corecount: 12
[2025-07-27 21:21:56] 2025-07-28 01:21:24,563 | INFO     | event service: False
[2025-07-27 21:21:56] 2025-07-28 01:21:24,563 | INFO     | sizes: {0: 2397248, 1: 2397503, 6: 2397765, 12: 2397793, 4518: 2423841, 4519: 2423840, 4520: 2433022, 4522: 2433078, 4527: 2433272}
[2025-07-27 21:21:56] 2025-07-28 01:21:24,563 | INFO     | --------------------------------------------------
[2025-07-27 21:21:56] 2025-07-28 01:21:24,563 | INFO     | 
[2025-07-27 21:21:56] 2025-07-28 01:21:24,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 21:21:56] 2025-07-28 01:21:24,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:21:56] 2025-07-28 01:21:24,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:21:56] 2025-07-28 01:21:24,584 | INFO     | job 6747499807 has completed (purged errors)
[2025-07-27 21:21:56] 2025-07-28 01:21:24,584 | INFO     | overall cleanup function is called
[2025-07-27 21:21:56] 2025-07-28 01:21:25,591 | INFO     | --- collectZombieJob: --- 10, [1354022]
[2025-07-27 21:21:56] 2025-07-28 01:21:25,591 | INFO     | zombie collector waiting for pid 1354022
[2025-07-27 21:21:56] 2025-07-28 01:21:25,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:21:56] 2025-07-28 01:21:25,591 | INFO     | collected zombie processes
[2025-07-27 21:21:56] 2025-07-28 01:21:25,591 | INFO     | will attempt to kill all subprocesses of pid=1354022
[2025-07-27 21:21:56] 2025-07-28 01:21:25,814 | INFO     | process IDs to be killed: [1354022] (in reverse order)
[2025-07-27 21:21:56] 2025-07-28 01:21:25,907 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:21:56] 2025-07-28 01:21:25,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:21:56] 2025-07-28 01:21:25,919 | INFO     | did not find any defunct processes belonging to 1354022
[2025-07-27 21:21:56] 2025-07-28 01:21:25,930 | INFO     | did not find any defunct processes belonging to 1354022
[2025-07-27 21:21:56] 2025-07-28 01:21:25,930 | INFO     | ready for new job
[2025-07-27 21:21:56] 2025-07-28 01:21:25,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:21:56] 2025-07-28 01:21:25,933 | INFO     | ***************************************
[2025-07-27 21:21:56] 2025-07-28 01:21:25,933 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:21:56] 2025-07-28 01:21:25,933 | INFO     | ***************************************
[2025-07-27 21:21:56] 2025-07-28 01:21:25,933 | INFO     | 
[2025-07-27 21:21:56] 2025-07-28 01:21:25,948 | INFO     | architecture information:
[2025-07-27 21:21:56] 2025-07-28 01:21:25,948 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:21:56] 2025-07-28 01:21:25,966 | INFO     | cat /etc/os-release:
[2025-07-27 21:21:56] NAME="CentOS Linux"
[2025-07-27 21:21:56] VERSION="7 (Core)"
[2025-07-27 21:21:56] ID="centos"
[2025-07-27 21:21:56] ID_LIKE="rhel fedora"
[2025-07-27 21:21:56] VERSION_ID="7"
[2025-07-27 21:21:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:21:56] ANSI_COLOR="0;31"
[2025-07-27 21:21:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:21:56] HOME_URL="https://www.centos.org/"
[2025-07-27 21:21:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:21:56] 
[2025-07-27 21:21:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:21:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:21:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:21:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:21:56] 
[2025-07-27 21:21:56] 2025-07-28 01:21:25,966 | INFO     | ***************************************
[2025-07-27 21:21:56] 2025-07-28 01:21:26,469 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 21:21:56] 2025-07-28 01:21:26,484 | INFO     | sufficient remaining disk space (76516687872 B)
[2025-07-27 21:21:56] 2025-07-28 01:21:26,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:21:56] 2025-07-28 01:21:26,485 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:21:56] 2025-07-28 01:21:26,485 | INFO     | update_server=False
[2025-07-27 21:21:56] 2025-07-28 01:21:26,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:21:56] 2025-07-28 01:21:26,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:21:56] 2025-07-28 01:21:26,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:21:56] 2025-07-28 01:21:26,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:21:56] 2025-07-28 01:21:26,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:21:56] 2025-07-28 01:21:26,487 | INFO     | aborting loop
[2025-07-27 21:21:56] 2025-07-28 01:21:26,584 | INFO     | all data control threads have been joined
[2025-07-27 21:21:56] 2025-07-28 01:21:27,490 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:27,492 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:27,492 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:27,589 | INFO     | [data] control thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:27,615 | INFO     | all job control threads have been joined
[2025-07-27 21:21:56] 2025-07-28 01:21:27,803 | INFO     | all payload control threads have been joined
[2025-07-27 21:21:56] 2025-07-28 01:21:28,066 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,106 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,270 | INFO     | [job] validate thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,492 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,620 | INFO     | [job] control thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,669 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,778 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,808 | INFO     | [payload] control thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,873 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:28,986 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:30,492 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:37,501 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:21:56] 2025-07-28 01:21:38,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:21:56] 2025-07-28 01:21:39,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324521625408)>', '<ExcThread(monitor, started 140323753813760)>']
[2025-07-27 21:21:56] 2025-07-28 01:21:44,709 | INFO     | all workflow threads have been joined
[2025-07-27 21:21:56] 2025-07-28 01:21:44,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:21:56] 2025-07-28 01:21:44,709 | INFO     | traces error code: 0
[2025-07-27 21:21:56] 2025-07-28 01:21:44,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:21:56] 2025-07-28 01:21:56,414 | INFO     | PID=1344079 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 21:21:56] 2025-07-28 01:21:56,415 | INFO     | .. there are 9 such processes running
[2025-07-27 21:21:56] 2025-07-28 01:21:56,415 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:21:56] 2025-07-28 01:21:56,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:21:56] 2025-07-28 01:21:56,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:21:56] 2025-07-28 01:21:56,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:21:56] 2025-07-28 01:21:56,415 | INFO     | [monitor] control thread has ended
[2025-07-27 21:21:56] 2025-07-28 01:21:56,607 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:21:56] 2025-07-28 01:21:56,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:21:56] 2025-07-28 01:21:56,613 [wrapper] pilotpid: 1344079
[2025-07-27 21:21:56] 2025-07-28 01:21:56,616 [wrapper] Pilot exit status: 0
[2025-07-27 21:21:56] 2025-07-28 01:21:56,628 [wrapper] pandaids: 6747499807
[2025-07-27 21:21:56] 2025-07-28 01:21:56,697 [wrapper] cleanup supervisor_pilot 1675921 1344080
[2025-07-27 21:21:56] 2025-07-28 01:21:56,700 [wrapper] Test setup, not cleaning
[2025-07-27 21:21:56] 2025-07-28 01:21:56,704 [wrapper] apfmon messages muted
[2025-07-27 21:21:56] 2025-07-28 01:21:56,707 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:21:56] 2025-07-28 01:21:56,710 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:21:56]  *** Error codes and diagnostics ***
[2025-07-27 21:21:56]     "exeErrorCode": 0,
[2025-07-27 21:21:56]     "exeErrorDiag": "",
[2025-07-27 21:21:56]     "pilotErrorCode": 0,
[2025-07-27 21:21:56]     "pilotErrorDiag": "",
[2025-07-27 21:21:56]  *** Listing of results directory ***
[2025-07-27 21:21:56] total 355660
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:53 pilot3.tar.gz
[2025-07-27 21:21:56] -rwx------. 1 boincer umatlas     36292 Jul 27 10:57 runpilot2-wrapper.sh
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:57 queuedata.json
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas       100 Jul 27 20:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:21:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 20:05 run_atlas
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas       105 Jul 27 20:05 job.xml
[2025-07-27 21:21:56] -rw-r--r--. 2 boincer umatlas 150119721 Jul 27 20:05 EVNT.45743347._002802.pool.root.1
[2025-07-27 21:21:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:05 start_atlas.sh
[2025-07-27 21:21:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 20:05 shared
[2025-07-27 21:21:56] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 20:05 input.tar.gz
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas         0 Jul 27 20:05 boinc_lockfile
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 20:05 pandaJob.out
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas    980125 Jul 27 20:05 agis_schedconf.cvmfs.json
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas   1593052 Jul 27 20:05 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:21:56] drwx------. 4 boincer umatlas      4096 Jul 27 20:05 pilot3
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas 208575264 Jul 27 21:20 HITS.45743349._051192.pool.root.1
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas       530 Jul 27 21:20 boinc_task_state.xml
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas      1047 Jul 27 21:21 memory_monitor_summary.json
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas    362369 Jul 27 21:21 log.45743349._051192.job.log.tgz.1
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas        95 Jul 27 21:21 pilot_heartbeat.json
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas      7821 Jul 27 21:21 heartbeat.json
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas      6842 Jul 27 21:21 init_data.xml
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 21:21 boinc_mmap_file
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas        27 Jul 27 21:21 wrapper_checkpoint.txt
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas       822 Jul 27 21:21 pilotlog.txt
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas    452586 Jul 27 21:21 log.45743349._051192.job.log.1
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas       357 Jul 27 21:21 output.list
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas       620 Jul 27 21:21 runtime_log
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas    829440 Jul 27 21:21 result.tar.gz
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 21:21 runtime_log.err
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas       656 Jul 27 21:21 RjcMDmRzH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6bVLDm2KBgJo.diag
[2025-07-27 21:21:56] -rw-r--r--. 1 boincer umatlas     21513 Jul 27 21:21 stderr.txt
[2025-07-27 21:21:56] HITS file was successfully produced:
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas 208575264 Jul 27 21:20 shared/HITS.pool.root.1
[2025-07-27 21:21:56]  *** Contents of shared directory: ***
[2025-07-27 21:21:56] total 351656
[2025-07-27 21:21:56] -rw-r--r--. 2 boincer umatlas 150119721 Jul 27 20:05 ATLAS.root_0
[2025-07-27 21:21:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 20:05 start_atlas.sh
[2025-07-27 21:21:56] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 20:05 input.tar.gz
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas 208575264 Jul 27 21:20 HITS.pool.root.1
[2025-07-27 21:21:56] -rw-------. 1 boincer umatlas    829440 Jul 27 21:21 result.tar.gz
21:21:58 (1340328): run_atlas exited; CPU time 49339.141011
21:21:58 (1340328): called boinc_finish(0)

</stderr_txt>
]]>

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