Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:37:18 (1257980): wrapper (7.7.26015): starting
18:37:18 (1257980): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:37:18] Arguments: --nthreads 8
[2025-07-27 18:37:18] Threads: 8
[2025-07-27 18:37:18] Checking for CVMFS
[2025-07-27 18:37:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:37:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:37:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:37:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:37:19] 2.13.1.0 1602499 13537 228288 148827 2 445 39784419 40960001 18295 16776704 0 79523677 99.754 78444327 35877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:37:19] CVMFS is ok
[2025-07-27 18:37:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:37:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:37:19] Further information can be found at the LHC@home message board.
[2025-07-27 18:37:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:37:19] Checking for apptainer binary...
[2025-07-27 18:37:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:37:19] Running /usr/bin/apptainer --version
[2025-07-27 18:37:19] apptainer version 1.4.1-1.el9
[2025-07-27 18:37:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:37:19] c-212-17.aglt2.org
[2025-07-27 18:37:19] apptainer works
[2025-07-27 18:37:19] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:37:19] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:37:19] Starting ATLAS job with PandaID=6747548967
[2025-07-27 18:37:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:19:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:19:10]  lfn=log.45743349._052834.job.log.tgz.1
[2025-07-27 20:19:10]  mtime=0
[2025-07-27 20:19:10]  protocol_id=None
[2025-07-27 20:19:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:19:10]  replicas=None
[2025-07-27 20:19:10]  scope=mc23_13p6TeV
[2025-07-27 20:19:10]  status=None
[2025-07-27 20:19:10]  status_code=0
[2025-07-27 20:19:10]  storage_token=
[2025-07-27 20:19:10]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747548967/log.45743349._052834.job.log.tgz.1
[2025-07-27 20:19:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/11/log.45743349._052834.job.log.tgz.1
[2025-07-27 20:19:10]  workdir=None
[2025-07-27 20:19:10] ]
[2025-07-27 20:19:10] 2025-07-28 00:18:30,049 | INFO     | transferring file log.45743349._052834.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747548967/log.45743349._052834.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:19:10] 2025-07-28 00:18:30,049 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747548967/log.45743349._052834.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._052834.job
[2025-07-27 20:19:10] 2025-07-28 00:18:30,074 | INFO     | adding to output.list: log.45743349._052834.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/11/log.45743349._052834.job.log.tg
[2025-07-27 20:19:10] 2025-07-28 00:18:30,075 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:19:10] 2025-07-28 00:18:30,075 | INFO     | summary of transferred files:
[2025-07-27 20:19:10] 2025-07-28 00:18:30,075 | INFO     |  -- lfn=log.45743349._052834.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:19:10] 2025-07-28 00:18:30,075 | INFO     | stage-out finished correctly
[2025-07-27 20:19:10] 2025-07-28 00:18:32,298 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:19:10] 2025-07-28 00:18:32,374 | INFO     | job 6747548967 has state=finished
[2025-07-27 20:19:10] 2025-07-28 00:18:32,374 | INFO     | preparing for final server update for job 6747548967 in state='finished'
[2025-07-27 20:19:10] 2025-07-28 00:18:32,375 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:19:10] 2025-07-28 00:18:32,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:19:10] 2025-07-28 00:18:32,375 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:19:10] 2025-07-28 00:18:32,375 | INFO     | job 6747548967 has finished - writing final server update
[2025-07-27 20:19:10] 2025-07-28 00:18:32,375 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:19:10] 2025-07-28 00:18:32,376 | INFO     | executing command: lscpu
[2025-07-27 20:19:10] 2025-07-28 00:18:32,455 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:19:10] 2025-07-28 00:18:33,475 | WARNING  | process 1269170 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 20:19:10] 2025-07-28 00:18:33,475 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747548967/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:19:10] 2025-07-28 00:18:33,854 | INFO     | number of running child processes to parent process 1269170: 1
[2025-07-27 20:19:10] 2025-07-28 00:18:33,854 | INFO     | maximum number of monitored processes: 6
[2025-07-27 20:19:10] 2025-07-28 00:18:36,358 | INFO     | monitor loop #434: job 0:6747548967 is in state 'finished'
[2025-07-27 20:19:10] 2025-07-28 00:18:36,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:19:10] 2025-07-28 00:18:38,155 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:19:10] 2025-07-28 00:18:38,167 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3103.6394583333336
[2025-07-27 20:19:10] 2025-07-28 00:18:38,181 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747548967/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:19:10] 2025-07-28 00:18:38,181 | INFO     | extracted standard info from prmon json
[2025-07-27 20:19:10] 2025-07-28 00:18:38,181 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:19:10] 2025-07-28 00:18:38,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:19:10] 2025-07-28 00:18:38,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:19:10] 2025-07-28 00:18:38,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:19:10] 2025-07-28 00:18:38,183 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | sum of deviations: -7942428170.5
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | mean x: 1753658980.5
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | mean y: 2585858.75
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | -- intersect: 57693556673.686386
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | intersect: 57693556673.686386
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | chi2: 0.0734454713493428
[2025-07-27 20:19:10] 2025-07-28 00:18:38,184 | INFO     | -- intersect: 57693556673.686386
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | current memory leak: -32.90 B/s (using 92 data points, chi2=0.07)
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | could have reported an average CPU frequency of 3091 MHz (7 samples)
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | ..............................
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . Timing measurements:
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . get job = 0 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . initial setup = 2 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . payload setup = 14 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . stage-in = 0 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . payload execution = 6015 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . stage-out = 1 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | . log creation = 0 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,185 | INFO     | ..............................
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | 
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | job summary report
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | --------------------------------------------------
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | PanDA job id: 6747548967
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | task id: 45743349
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | errors: (none)
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | pilot state: finished 
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | transexitcode: 0
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | exeerrorcode: 0
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | exeerrordiag: 
[2025-07-27 20:19:10] 2025-07-28 00:18:38,256 | INFO     | exitcode: 0
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | exitmsg: OK
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | cpuconsumptiontime: 38305 s
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | nevents: 400
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | neventsw: 0
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | pid: 1269170
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | pgrp: 1269170
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | corecount: 8
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | event service: False
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | sizes: {0: 2396647, 1: 2397503, 10: 2397765, 12: 2397793, 6032: 2424447, 6033: 2424446, 6034: 2433628, 6036: 2433684, 6042: 2433878}
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | --------------------------------------------------
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | 
[2025-07-27 20:19:10] 2025-07-28 00:18:38,257 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 20:19:10] 2025-07-28 00:18:38,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | job 6747548967 has completed (purged errors)
[2025-07-27 20:19:10] 2025-07-28 00:18:38,283 | INFO     | overall cleanup function is called
[2025-07-27 20:19:10] 2025-07-28 00:18:39,293 | INFO     | --- collectZombieJob: --- 10, [1269170]
[2025-07-27 20:19:10] 2025-07-28 00:18:39,293 | INFO     | zombie collector waiting for pid 1269170
[2025-07-27 20:19:10] 2025-07-28 00:18:39,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:19:10] 2025-07-28 00:18:39,293 | INFO     | collected zombie processes
[2025-07-27 20:19:10] 2025-07-28 00:18:39,293 | INFO     | will attempt to kill all subprocesses of pid=1269170
[2025-07-27 20:19:10] 2025-07-28 00:18:39,686 | INFO     | process IDs to be killed: [1269170] (in reverse order)
[2025-07-27 20:19:10] 2025-07-28 00:18:39,822 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:19:10] 2025-07-28 00:18:39,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:19:10] 2025-07-28 00:18:39,839 | INFO     | did not find any defunct processes belonging to 1269170
[2025-07-27 20:19:10] 2025-07-28 00:18:39,856 | INFO     | did not find any defunct processes belonging to 1269170
[2025-07-27 20:19:10] 2025-07-28 00:18:39,856 | INFO     | ready for new job
[2025-07-27 20:19:10] 2025-07-28 00:18:39,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:19:10] 2025-07-28 00:18:39,858 | INFO     | ***************************************
[2025-07-27 20:19:10] 2025-07-28 00:18:39,858 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:19:10] 2025-07-28 00:18:39,858 | INFO     | ***************************************
[2025-07-27 20:19:10] 2025-07-28 00:18:39,858 | INFO     | 
[2025-07-27 20:19:10] 2025-07-28 00:18:39,863 | INFO     | architecture information:
[2025-07-27 20:19:10] 2025-07-28 00:18:39,864 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:19:10] 2025-07-28 00:18:39,889 | INFO     | cat /etc/os-release:
[2025-07-27 20:19:10] NAME="CentOS Linux"
[2025-07-27 20:19:10] VERSION="7 (Core)"
[2025-07-27 20:19:10] ID="centos"
[2025-07-27 20:19:10] ID_LIKE="rhel fedora"
[2025-07-27 20:19:10] VERSION_ID="7"
[2025-07-27 20:19:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:19:10] ANSI_COLOR="0;31"
[2025-07-27 20:19:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:19:10] HOME_URL="https://www.centos.org/"
[2025-07-27 20:19:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:19:10] 
[2025-07-27 20:19:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:19:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:19:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:19:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:19:10] 
[2025-07-27 20:19:10] 2025-07-28 00:18:39,889 | INFO     | ***************************************
[2025-07-27 20:19:10] 2025-07-28 00:18:40,392 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 20:19:10] 2025-07-28 00:18:40,414 | INFO     | sufficient remaining disk space (129100677120 B)
[2025-07-27 20:19:10] 2025-07-28 00:18:40,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:19:10] 2025-07-28 00:18:40,415 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:19:10] 2025-07-28 00:18:40,415 | INFO     | update_server=False
[2025-07-27 20:19:10] 2025-07-28 00:18:40,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:19:10] 2025-07-28 00:18:40,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:19:10] 2025-07-28 00:18:40,416 | INFO     | aborting loop
[2025-07-27 20:19:10] 2025-07-28 00:18:40,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:19:10] 2025-07-28 00:18:40,797 | INFO     | all data control threads have been joined
[2025-07-27 20:19:10] 2025-07-28 00:18:40,975 | INFO     | all payload control threads have been joined
[2025-07-27 20:19:10] 2025-07-28 00:18:40,988 | INFO     | all job control threads have been joined
[2025-07-27 20:19:10] 2025-07-28 00:18:41,421 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:41,421 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:41,527 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:41,717 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:41,802 | INFO     | [data] control thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:41,982 | INFO     | [payload] control thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:41,982 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:41,993 | INFO     | [job] control thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:42,219 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:42,220 | INFO     | [job] validate thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:42,522 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:42,715 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:42,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:19:10] 2025-07-28 00:18:42,890 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:43,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:19:10] 2025-07-28 00:18:44,272 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:46,892 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:50,970 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:19:10] 2025-07-28 00:18:51,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:19:10] 2025-07-28 00:18:53,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952619996992)>', '<ExcThread(monitor, started 139951903598336)>']
[2025-07-27 20:19:10] 2025-07-28 00:18:59,022 | INFO     | all workflow threads have been joined
[2025-07-27 20:19:10] 2025-07-28 00:18:59,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:19:10] 2025-07-28 00:18:59,022 | INFO     | traces error code: 0
[2025-07-27 20:19:10] 2025-07-28 00:18:59,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:19:10] 2025-07-28 00:19:10,184 | INFO     | PID=1261602 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:19:10] 2025-07-28 00:19:10,185 | INFO     | .. there are 17 such processes running
[2025-07-27 20:19:10] 2025-07-28 00:19:10,185 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:19:10] 2025-07-28 00:19:10,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:19:10] 2025-07-28 00:19:10,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:19:10] 2025-07-28 00:19:10,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:19:10] 2025-07-28 00:19:10,185 | INFO     | [monitor] control thread has ended
[2025-07-27 20:19:10] 2025-07-28 00:19:10,446 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:19:10] 2025-07-28 00:19:10,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:19:10] 2025-07-28 00:19:10,460 [wrapper] pilotpid: 1261602
[2025-07-27 20:19:10] 2025-07-28 00:19:10,465 [wrapper] Pilot exit status: 0
[2025-07-27 20:19:10] 2025-07-28 00:19:10,480 [wrapper] pandaids: 6747548967
[2025-07-27 20:19:10] 2025-07-28 00:19:10,587 [wrapper] cleanup supervisor_pilot 1899864 1261603
[2025-07-27 20:19:10] 2025-07-28 00:19:10,592 [wrapper] Test setup, not cleaning
[2025-07-27 20:19:10] 2025-07-28 00:19:10,596 [wrapper] apfmon messages muted
[2025-07-27 20:19:10] 2025-07-28 00:19:10,601 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:19:10] 2025-07-28 00:19:10,605 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:19:10]  *** Error codes and diagnostics ***
[2025-07-27 20:19:10]     "exeErrorCode": 0,
[2025-07-27 20:19:10]     "exeErrorDiag": "",
[2025-07-27 20:19:10]     "pilotErrorCode": 0,
[2025-07-27 20:19:10]     "pilotErrorDiag": "",
[2025-07-27 20:19:10]  *** Listing of results directory ***
[2025-07-27 20:19:10] total 351312
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 20:19:10] -rwx------. 1 boincer umatlas     36292 Jul 27 13:24 runpilot2-wrapper.sh
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:24 queuedata.json
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:19:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:37 run_atlas
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:37 job.xml
[2025-07-27 20:19:10] -rw-r--r--. 2 boincer umatlas 145879506 Jul 27 18:37 EVNT.45743347._002825.pool.root.1
[2025-07-27 20:19:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:37 start_atlas.sh
[2025-07-27 20:19:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:37 shared
[2025-07-27 20:19:10] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 18:37 input.tar.gz
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:37 boinc_lockfile
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:37 pandaJob.out
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas    980109 Jul 27 18:37 agis_schedconf.cvmfs.json
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:37 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:19:10] drwx------. 4 boincer umatlas      4096 Jul 27 18:37 pilot3
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas      6943 Jul 27 20:12 init_data.xml
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas 208197922 Jul 27 20:17 HITS.45743349._052834.pool.root.1
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:18 boinc_task_state.xml
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas        95 Jul 27 20:18 pilot_heartbeat.json
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas      1033 Jul 27 20:18 memory_monitor_summary.json
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas    319374 Jul 27 20:18 log.45743349._052834.job.log.tgz.1
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas      7778 Jul 27 20:18 heartbeat.json
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:19 boinc_mmap_file
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas       823 Jul 27 20:19 pilotlog.txt
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:19 wrapper_checkpoint.txt
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas    574516 Jul 27 20:19 log.45743349._052834.job.log.1
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas       357 Jul 27 20:19 output.list
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:19 runtime_log
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas    911360 Jul 27 20:19 result.tar.gz
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 20:19 runtime_log.err
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas       655 Jul 27 20:19 POeMDmeHK07n9Rq4apOajLDm4fhM0noT9bVof3QYDmbp2KDmqBQyQn.diag
[2025-07-27 20:19:10] -rw-r--r--. 1 boincer umatlas     21685 Jul 27 20:19 stderr.txt
[2025-07-27 20:19:10] HITS file was successfully produced:
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas 208197922 Jul 27 20:17 shared/HITS.pool.root.1
[2025-07-27 20:19:10]  *** Contents of shared directory: ***
[2025-07-27 20:19:10] total 347232
[2025-07-27 20:19:10] -rw-r--r--. 2 boincer umatlas 145879506 Jul 27 18:37 ATLAS.root_0
[2025-07-27 20:19:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:37 start_atlas.sh
[2025-07-27 20:19:10] -rw-r--r--. 2 boincer umatlas    542895 Jul 27 18:37 input.tar.gz
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas 208197922 Jul 27 20:17 HITS.pool.root.1
[2025-07-27 20:19:10] -rw-------. 1 boincer umatlas    911360 Jul 27 20:19 result.tar.gz
20:19:12 (1257980): run_atlas exited; CPU time 38467.089054
20:19:12 (1257980): called boinc_finish(0)

</stderr_txt>
]]>

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