Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:29 (496014): wrapper (7.7.26015): starting
19:00:29 (496014): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 19:00:29] Arguments: --nthreads 8
[2025-07-27 19:00:29] Threads: 8
[2025-07-27 19:00:29] Checking for CVMFS
[2025-07-27 19:00:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:00:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:00:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:00:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:00:30] 2.13.1.0 645510 14816 263852 148827 0 196 37102408 40960000 9783 16776704 0 52105589 99.795 41430729 36980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 19:00:30] CVMFS is ok
[2025-07-27 19:00:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:00:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:00:30] Further information can be found at the LHC@home message board.
[2025-07-27 19:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:00:30] Checking for apptainer binary...
[2025-07-27 19:00:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:00:30] Running /usr/bin/apptainer --version
[2025-07-27 19:00:30] apptainer version 1.4.1-1.el9
[2025-07-27 19:00:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:00:30] c-212-5.aglt2.org
[2025-07-27 19:00:30] apptainer works
[2025-07-27 19:00:30] Set ATHENA_PROC_NUMBER=8
[2025-07-27 19:00:30] Set ATHENA_CORE_NUMBER=8
[2025-07-27 19:00:30] Starting ATLAS job with PandaID=6747548955
[2025-07-27 19:00:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:16:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:16:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 20:16:22]  is_altstaged=None
[2025-07-27 20:16:22]  is_tar=False
[2025-07-27 20:16:22]  lfn=log.45743349._052822.job.log.tgz.1
[2025-07-27 20:16:22]  mtime=0
[2025-07-27 20:16:22]  protocol_id=None
[2025-07-27 20:16:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:16:22]  replicas=None
[2025-07-27 20:16:22]  scope=mc23_13p6TeV
[2025-07-27 20:16:22]  status=None
[2025-07-27 20:16:22]  status_code=0
[2025-07-27 20:16:22]  storage_token=
[2025-07-27 20:16:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6747548955/log.45743349._052822.job.log.tgz.1
[2025-07-27 20:16:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/87/log.45743349._052822.job.log.tgz.1
[2025-07-27 20:16:22]  workdir=None
[2025-07-27 20:16:22] ]
[2025-07-27 20:16:22] 2025-07-28 00:15:46,199 | INFO     | monitor loop #331: job 0:6747548955 is in state 'stageout'
[2025-07-27 20:16:22] 2025-07-28 00:15:46,199 | WARNING  | aborting job monitor tasks since payload process 508021 is not running
[2025-07-27 20:16:22] 2025-07-28 00:15:46,199 | INFO     | transferring file log.45743349._052822.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6747548955/log.45743349._052822.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:16:22] 2025-07-28 00:15:46,200 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6747548955/log.45743349._052822.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._052822.job
[2025-07-27 20:16:22] 2025-07-28 00:15:46,218 | INFO     | adding to output.list: log.45743349._052822.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/87/log.45743349._052822.job.log.tg
[2025-07-27 20:16:22] 2025-07-28 00:15:46,219 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:16:22] 2025-07-28 00:15:46,219 | INFO     | summary of transferred files:
[2025-07-27 20:16:22] 2025-07-28 00:15:46,219 | INFO     |  -- lfn=log.45743349._052822.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:16:22] 2025-07-28 00:15:46,219 | INFO     | stage-out finished correctly
[2025-07-27 20:16:22] 2025-07-28 00:15:46,736 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:16:22] 2025-07-28 00:15:46,789 | INFO     | job 6747548955 has state=finished
[2025-07-27 20:16:22] 2025-07-28 00:15:46,790 | INFO     | preparing for final server update for job 6747548955 in state='finished'
[2025-07-27 20:16:22] 2025-07-28 00:15:46,790 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:16:22] 2025-07-28 00:15:46,790 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:16:22] 2025-07-28 00:15:46,790 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:16:22] 2025-07-28 00:15:46,790 | INFO     | job 6747548955 has finished - writing final server update
[2025-07-27 20:16:22] 2025-07-28 00:15:46,790 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:16:22] 2025-07-28 00:15:46,791 | INFO     | executing command: lscpu
[2025-07-27 20:16:22] 2025-07-28 00:15:46,840 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:16:22] 2025-07-28 00:15:48,702 | INFO     | monitor loop #332: job 0:6747548955 is in state 'finished'
[2025-07-27 20:16:22] 2025-07-28 00:15:48,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:16:22] 2025-07-28 00:15:50,761 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:16:22] 2025-07-28 00:15:50,765 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3292.9974166666657
[2025-07-27 20:16:22] 2025-07-28 00:15:50,776 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747548955/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:16:22] 2025-07-28 00:15:50,776 | INFO     | extracted standard info from prmon json
[2025-07-27 20:16:22] 2025-07-28 00:15:50,776 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:16:22] 2025-07-28 00:15:50,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:16:22] 2025-07-28 00:15:50,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:16:22] 2025-07-28 00:15:50,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | sum of square deviations: 93240818.0
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | sum of deviations: -300249808.00000006
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | mean x: 1753659595.0
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | mean y: 2525140.6268656715
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | -- intersect: 5649579381.3576565
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | intersect: 5649579381.3576565
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | chi2: 0.001872332166771437
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | -- intersect: 5649579381.3576565
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | current memory leak: -3.22 B/s (using 67 data points, chi2=0.00)
[2025-07-27 20:16:22] 2025-07-28 00:15:50,778 | INFO     | could have reported an average CPU frequency of 3275 MHz (6 samples)
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | ..............................
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . Timing measurements:
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . get job = 0 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . initial setup = 2 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . payload setup = 9 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . stage-in = 0 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . payload execution = 4471 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . stage-out = 0 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | . log creation = 0 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,779 | INFO     | ..............................
[2025-07-27 20:16:22] 2025-07-28 00:15:50,833 | INFO     | 
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | job summary report
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | --------------------------------------------------
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | PanDA job id: 6747548955
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | task id: 45743349
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | errors: (none)
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | pilot state: finished 
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | transexitcode: 0
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | exeerrorcode: 0
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | exeerrordiag: 
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | exitcode: 0
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | exitmsg: OK
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | cpuconsumptiontime: 33391 s
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | nevents: 400
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | neventsw: 0
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | pid: 508021
[2025-07-27 20:16:22] 2025-07-28 00:15:50,834 | INFO     | pgrp: 508021
[2025-07-27 20:16:22] 2025-07-28 00:15:50,835 | INFO     | corecount: 8
[2025-07-27 20:16:22] 2025-07-28 00:15:50,835 | INFO     | event service: False
[2025-07-27 20:16:22] 2025-07-28 00:15:50,835 | INFO     | sizes: {0: 2397475, 7: 2397737, 11: 2397765, 4484: 2423760, 4485: 2432758, 4486: 2432814, 4490: 2433136}
[2025-07-27 20:16:22] 2025-07-28 00:15:50,835 | INFO     | --------------------------------------------------
[2025-07-27 20:16:22] 2025-07-28 00:15:50,835 | INFO     | 
[2025-07-27 20:16:22] 2025-07-28 00:15:50,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:16:22] 2025-07-28 00:15:50,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:16:22] 2025-07-28 00:15:50,851 | INFO     | job 6747548955 has completed (purged errors)
[2025-07-27 20:16:22] 2025-07-28 00:15:50,852 | INFO     | overall cleanup function is called
[2025-07-27 20:16:22] 2025-07-28 00:15:51,859 | INFO     | --- collectZombieJob: --- 10, [508021]
[2025-07-27 20:16:22] 2025-07-28 00:15:51,860 | INFO     | zombie collector waiting for pid 508021
[2025-07-27 20:16:22] 2025-07-28 00:15:51,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:16:22] 2025-07-28 00:15:51,860 | INFO     | collected zombie processes
[2025-07-27 20:16:22] 2025-07-28 00:15:51,860 | INFO     | will attempt to kill all subprocesses of pid=508021
[2025-07-27 20:16:22] 2025-07-28 00:15:52,227 | INFO     | process IDs to be killed: [508021] (in reverse order)
[2025-07-27 20:16:22] 2025-07-28 00:15:52,320 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:16:22] 2025-07-28 00:15:52,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:16:22] 2025-07-28 00:15:52,336 | INFO     | did not find any defunct processes belonging to 508021
[2025-07-27 20:16:22] 2025-07-28 00:15:52,348 | INFO     | did not find any defunct processes belonging to 508021
[2025-07-27 20:16:22] 2025-07-28 00:15:52,348 | INFO     | ready for new job
[2025-07-27 20:16:22] 2025-07-28 00:15:52,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:16:22] 2025-07-28 00:15:52,349 | INFO     | ***************************************
[2025-07-27 20:16:22] 2025-07-28 00:15:52,350 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:16:22] 2025-07-28 00:15:52,350 | INFO     | ***************************************
[2025-07-27 20:16:22] 2025-07-28 00:15:52,350 | INFO     | 
[2025-07-27 20:16:22] 2025-07-28 00:15:52,354 | INFO     | architecture information:
[2025-07-27 20:16:22] 2025-07-28 00:15:52,355 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:16:22] 2025-07-28 00:15:52,372 | INFO     | cat /etc/os-release:
[2025-07-27 20:16:22] NAME="CentOS Linux"
[2025-07-27 20:16:22] VERSION="7 (Core)"
[2025-07-27 20:16:22] ID="centos"
[2025-07-27 20:16:22] ID_LIKE="rhel fedora"
[2025-07-27 20:16:22] VERSION_ID="7"
[2025-07-27 20:16:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:16:22] ANSI_COLOR="0;31"
[2025-07-27 20:16:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:16:22] HOME_URL="https://www.centos.org/"
[2025-07-27 20:16:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:16:22] 
[2025-07-27 20:16:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:16:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:16:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:16:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:16:22] 
[2025-07-27 20:16:22] 2025-07-28 00:15:52,373 | INFO     | ***************************************
[2025-07-27 20:16:22] 2025-07-28 00:15:52,875 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:16:22] 2025-07-28 00:15:52,889 | INFO     | sufficient remaining disk space (124824584192 B)
[2025-07-27 20:16:22] 2025-07-28 00:15:52,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:16:22] 2025-07-28 00:15:52,889 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:16:22] 2025-07-28 00:15:52,889 | INFO     | update_server=False
[2025-07-27 20:16:22] 2025-07-28 00:15:52,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:16:22] 2025-07-28 00:15:52,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:16:22] 2025-07-28 00:15:52,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:16:22] 2025-07-28 00:15:52,890 | INFO     | aborting loop
[2025-07-27 20:16:22] 2025-07-28 00:15:53,038 | INFO     | all job control threads have been joined
[2025-07-27 20:16:22] 2025-07-28 00:15:53,154 | INFO     | all data control threads have been joined
[2025-07-27 20:16:22] 2025-07-28 00:15:53,640 | INFO     | all payload control threads have been joined
[2025-07-27 20:16:22] 2025-07-28 00:15:53,894 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:53,895 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:54,044 | INFO     | [job] control thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:54,160 | INFO     | [data] control thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:54,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:54,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:16:22] 2025-07-28 00:15:54,394 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:54,477 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:54,646 | INFO     | [payload] control thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:54,986 | INFO     | [job] validate thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:55,288 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:55,307 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:55,348 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:55,433 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:55,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:16:22] 2025-07-28 00:15:56,292 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:56,849 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:56,895 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:16:22] 2025-07-28 00:15:57,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757533742912)>', '<ExcThread(monitor, started 139757178820352)>']
[2025-07-27 20:16:22] 2025-07-28 00:16:02,155 | INFO     | all workflow threads have been joined
[2025-07-27 20:16:22] 2025-07-28 00:16:02,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:16:22] 2025-07-28 00:16:02,155 | INFO     | traces error code: 0
[2025-07-27 20:16:22] 2025-07-28 00:16:02,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:16:22] 2025-07-28 00:16:22,449 | INFO     | PID=501541 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 20:16:22] 2025-07-28 00:16:22,449 | INFO     | .. there are 14 such processes running
[2025-07-27 20:16:22] 2025-07-28 00:16:22,449 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:16:22] 2025-07-28 00:16:22,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:16:22] 2025-07-28 00:16:22,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:16:22] 2025-07-28 00:16:22,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:16:22] 2025-07-28 00:16:22,450 | INFO     | [monitor] control thread has ended
[2025-07-27 20:16:22] 2025-07-28 00:16:22,616 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:16:22] 2025-07-28 00:16:22,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:16:22] 2025-07-28 00:16:22,623 [wrapper] pilotpid: 501541
[2025-07-27 20:16:22] 2025-07-28 00:16:22,627 [wrapper] Pilot exit status: 0
[2025-07-27 20:16:22] 2025-07-28 00:16:22,637 [wrapper] pandaids: 6747548955
[2025-07-27 20:16:22] 2025-07-28 00:16:22,715 [wrapper] cleanup supervisor_pilot  817511 501542
[2025-07-27 20:16:22] 2025-07-28 00:16:22,718 [wrapper] Test setup, not cleaning
[2025-07-27 20:16:22] 2025-07-28 00:16:22,721 [wrapper] apfmon messages muted
[2025-07-27 20:16:22] 2025-07-28 00:16:22,723 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:16:22] 2025-07-28 00:16:22,727 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:16:22]  *** Error codes and diagnostics ***
[2025-07-27 20:16:22]     "exeErrorCode": 0,
[2025-07-27 20:16:22]     "exeErrorDiag": "",
[2025-07-27 20:16:22]     "pilotErrorCode": 0,
[2025-07-27 20:16:22]     "pilotErrorDiag": "",
[2025-07-27 20:16:22]  *** Listing of results directory ***
[2025-07-27 20:16:22] total 357436
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 20:16:22] -rwx------. 1 boincer umatlas     36292 Jul 27 13:27 runpilot2-wrapper.sh
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:27 queuedata.json
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas       100 Jul 27 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:16:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 19:00 run_atlas
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas       105 Jul 27 19:00 job.xml
[2025-07-27 20:16:22] -rw-r--r--. 2 boincer umatlas 146597909 Jul 27 19:00 EVNT.45743347._002824.pool.root.1
[2025-07-27 20:16:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:00 start_atlas.sh
[2025-07-27 20:16:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 19:00 shared
[2025-07-27 20:16:22] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 19:00 input.tar.gz
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas         0 Jul 27 19:00 boinc_lockfile
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 19:00 pandaJob.out
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas    980109 Jul 27 19:00 agis_schedconf.cvmfs.json
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas   1593052 Jul 27 19:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:16:22] drwx------. 4 boincer umatlas      4096 Jul 27 19:00 pilot3
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 20:11 init_data.xml
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas 214038462 Jul 27 20:15 HITS.45743349._052822.pool.root.1
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:15 boinc_task_state.xml
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas        95 Jul 27 20:15 pilot_heartbeat.json
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas      1026 Jul 27 20:15 memory_monitor_summary.json
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas    304129 Jul 27 20:15 log.45743349._052822.job.log.tgz.1
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas      7757 Jul 27 20:15 heartbeat.json
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:16 wrapper_checkpoint.txt
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas       822 Jul 27 20:16 pilotlog.txt
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas    444711 Jul 27 20:16 log.45743349._052822.job.log.1
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas       357 Jul 27 20:16 output.list
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:16 runtime_log
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas    768000 Jul 27 20:16 result.tar.gz
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:16 boinc_mmap_file
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 20:16 runtime_log.err
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas       650 Jul 27 20:16 CgGODmkKK07n9Rq4apOajLDm4fhM0noT9bVof3QYDm0p2KDm1uQMon.diag
[2025-07-27 20:16:22] -rw-r--r--. 1 boincer umatlas     21442 Jul 27 20:16 stderr.txt
[2025-07-27 20:16:22] HITS file was successfully produced:
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas 214038462 Jul 27 20:15 shared/HITS.pool.root.1
[2025-07-27 20:16:22]  *** Contents of shared directory: ***
[2025-07-27 20:16:22] total 353496
[2025-07-27 20:16:22] -rw-r--r--. 2 boincer umatlas 146597909 Jul 27 19:00 ATLAS.root_0
[2025-07-27 20:16:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 19:00 start_atlas.sh
[2025-07-27 20:16:22] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 19:00 input.tar.gz
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas 214038462 Jul 27 20:15 HITS.pool.root.1
[2025-07-27 20:16:22] -rw-------. 1 boincer umatlas    768000 Jul 27 20:16 result.tar.gz
20:16:24 (496014): run_atlas exited; CPU time 33514.289558
20:16:24 (496014): called boinc_finish(0)

</stderr_txt>
]]>

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