Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:43:04 (3233671): wrapper (7.7.26015): starting
18:43:04 (3233671): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:43:04] Arguments: --nthreads 8
[2025-07-27 18:43:04] Threads: 8
[2025-07-27 18:43:04] Checking for CVMFS
[2025-07-27 18:43:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:43:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:43:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:43:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:43:04] 2.12.6.0 4167112 18995 316352 148827 1 711 28831370 32935937 18581 16776704 1 101844799 99.669 170288301 16373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 18:43:04] CVMFS is ok
[2025-07-27 18:43:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:43:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:43:04] Further information can be found at the LHC@home message board.
[2025-07-27 18:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:43:04] Checking for apptainer binary...
[2025-07-27 18:43:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:43:04] Running /usr/bin/apptainer --version
[2025-07-27 18:43:04] apptainer version 1.4.1-1.el9
[2025-07-27 18:43:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:43:04] c7-16-8.aglt2.org
[2025-07-27 18:43:04] apptainer works
[2025-07-27 18:43:04] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:43:04] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:43:04] Starting ATLAS job with PandaID=6747413396
[2025-07-27 18:43:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:19:00]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:19:00]  status=None
[2025-07-27 20:19:00]  status_code=0
[2025-07-27 20:19:00]  storage_token=
[2025-07-27 20:19:00]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747413396/log.45743349._050170.job.log.tgz.1
[2025-07-27 20:19:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/19/log.45743349._050170.job.log.tgz.1
[2025-07-27 20:19:00]  workdir=None
[2025-07-27 20:19:00] ]
[2025-07-27 20:19:00] 2025-07-28 00:18:15,959 | INFO     | transferring file log.45743349._050170.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747413396/log.45743349._050170.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:19:00] 2025-07-28 00:18:15,959 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747413396/log.45743349._050170.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._050170.job
[2025-07-27 20:19:00] 2025-07-28 00:18:16,012 | INFO     | adding to output.list: log.45743349._050170.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/19/log.45743349._050170.job.log.tg
[2025-07-27 20:19:00] 2025-07-28 00:18:16,013 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:19:00] 2025-07-28 00:18:16,013 | INFO     | summary of transferred files:
[2025-07-27 20:19:00] 2025-07-28 00:18:16,013 | INFO     |  -- lfn=log.45743349._050170.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:19:00] 2025-07-28 00:18:16,013 | INFO     | stage-out finished correctly
[2025-07-27 20:19:00] 2025-07-28 00:18:16,400 | INFO     | number of running child processes to parent process 3263086: 1
[2025-07-27 20:19:00] 2025-07-28 00:18:16,401 | INFO     | maximum number of monitored processes: 6
[2025-07-27 20:19:00] 2025-07-28 00:18:16,860 | INFO     | PID=3246459 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 20:19:00] 2025-07-28 00:18:16,861 | INFO     | .. there are 14 such processes running
[2025-07-27 20:19:00] 2025-07-28 00:18:17,058 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:19:00] 2025-07-28 00:18:18,905 | INFO     | monitor loop #398: job 0:6747413396 is in state 'finished'
[2025-07-27 20:19:00] 2025-07-28 00:18:18,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:19:00] 2025-07-28 00:18:18,933 | INFO     | job 6747413396 has state=finished
[2025-07-27 20:19:00] 2025-07-28 00:18:18,933 | INFO     | preparing for final server update for job 6747413396 in state='finished'
[2025-07-27 20:19:00] 2025-07-28 00:18:18,938 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:19:00] 2025-07-28 00:18:18,938 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:19:00] 2025-07-28 00:18:18,938 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:19:00] 2025-07-28 00:18:18,938 | INFO     | job 6747413396 has finished - writing final server update
[2025-07-27 20:19:00] 2025-07-28 00:18:18,939 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:19:00] 2025-07-28 00:18:18,951 | INFO     | executing command: lscpu
[2025-07-27 20:19:00] 2025-07-28 00:18:19,071 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:19:00] 2025-07-28 00:18:21,410 | INFO     | monitor loop #399: job 0:6747413396 is in state 'finished'
[2025-07-27 20:19:00] 2025-07-28 00:18:21,410 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:19:00] 2025-07-28 00:18:23,915 | INFO     | monitor loop #400: job 0:6747413396 is in state 'finished'
[2025-07-27 20:19:00] 2025-07-28 00:18:23,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:19:00] 2025-07-28 00:18:26,150 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:19:00] 2025-07-28 00:18:26,155 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2977.855614583332
[2025-07-27 20:19:00] 2025-07-28 00:18:26,171 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747413396/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:19:00] 2025-07-28 00:18:26,172 | INFO     | extracted standard info from prmon json
[2025-07-27 20:19:00] 2025-07-28 00:18:26,172 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:19:00] 2025-07-28 00:18:26,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:19:00] 2025-07-28 00:18:26,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:19:00] 2025-07-28 00:18:26,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:19:00] 2025-07-28 00:18:26,174 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:19:00] 2025-07-28 00:18:26,174 | INFO     | sum of square deviations: 197203697.5
[2025-07-27 20:19:00] 2025-07-28 00:18:26,189 | INFO     | sum of deviations: -7240542802.999998
[2025-07-27 20:19:00] 2025-07-28 00:18:26,190 | INFO     | mean x: 1753659143.5
[2025-07-27 20:19:00] 2025-07-28 00:18:26,190 | INFO     | mean y: 2211288.3720930233
[2025-07-27 20:19:00] 2025-07-28 00:18:26,190 | INFO     | -- intersect: 64389665739.54467
[2025-07-27 20:19:00] 2025-07-28 00:18:26,190 | INFO     | intersect: 64389665739.54467
[2025-07-27 20:19:00] 2025-07-28 00:18:26,190 | INFO     | chi2: 0.08952679215546858
[2025-07-27 20:19:00] 2025-07-28 00:18:26,190 | INFO     | -- intersect: 64389665739.54467
[2025-07-27 20:19:00] 2025-07-28 00:18:26,190 | INFO     | current memory leak: -36.72 B/s (using 86 data points, chi2=0.09)
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | could have reported an average CPU frequency of 3009 MHz (7 samples)
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | ..............................
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . Timing measurements:
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . get job = 0 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . initial setup = 4 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . payload setup = 13 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . stage-in = 0 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . payload execution = 5652 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . stage-out = 1 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | . log creation = 0 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,191 | INFO     | ..............................
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | 
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | job summary report
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | --------------------------------------------------
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | PanDA job id: 6747413396
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | task id: 45743349
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | errors: (none)
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:19:00] 2025-07-28 00:18:26,321 | INFO     | pilot state: finished 
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | transexitcode: 0
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | exeerrorcode: 0
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | exeerrordiag: 
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | exitcode: 0
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | exitmsg: OK
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | cpuconsumptiontime: 37306 s
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | nevents: 400
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | neventsw: 0
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | pid: 3263086
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | pgrp: 3263086
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | corecount: 8
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | event service: False
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | sizes: {0: 2397474, 1: 2397474, 9: 2397764, 11: 2397792, 5669: 2424560, 5671: 2433558, 5672: 2433742, 5681: 2433936}
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | --------------------------------------------------
[2025-07-27 20:19:00] 2025-07-28 00:18:26,322 | INFO     | 
[2025-07-27 20:19:00] 2025-07-28 00:18:26,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:19:00] 2025-07-28 00:18:26,359 | INFO     | job 6747413396 has completed (purged errors)
[2025-07-27 20:19:00] 2025-07-28 00:18:26,360 | INFO     | overall cleanup function is called
[2025-07-27 20:19:00] 2025-07-28 00:18:27,369 | INFO     | --- collectZombieJob: --- 10, [3263086]
[2025-07-27 20:19:00] 2025-07-28 00:18:27,369 | INFO     | zombie collector waiting for pid 3263086
[2025-07-27 20:19:00] 2025-07-28 00:18:27,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:19:00] 2025-07-28 00:18:27,369 | INFO     | collected zombie processes
[2025-07-27 20:19:00] 2025-07-28 00:18:27,369 | INFO     | will attempt to kill all subprocesses of pid=3263086
[2025-07-27 20:19:00] 2025-07-28 00:18:27,875 | INFO     | process IDs to be killed: [3263086] (in reverse order)
[2025-07-27 20:19:00] 2025-07-28 00:18:28,054 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:19:00] 2025-07-28 00:18:28,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:19:00] 2025-07-28 00:18:28,074 | INFO     | did not find any defunct processes belonging to 3263086
[2025-07-27 20:19:00] 2025-07-28 00:18:28,093 | INFO     | did not find any defunct processes belonging to 3263086
[2025-07-27 20:19:00] 2025-07-28 00:18:28,093 | INFO     | ready for new job
[2025-07-27 20:19:00] 2025-07-28 00:18:28,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:19:00] 2025-07-28 00:18:28,094 | INFO     | ***************************************
[2025-07-27 20:19:00] 2025-07-28 00:18:28,094 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:19:00] 2025-07-28 00:18:28,095 | INFO     | ***************************************
[2025-07-27 20:19:00] 2025-07-28 00:18:28,095 | INFO     | 
[2025-07-27 20:19:00] 2025-07-28 00:18:28,120 | INFO     | architecture information:
[2025-07-27 20:19:00] 2025-07-28 00:18:28,121 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:19:00] 2025-07-28 00:18:28,168 | INFO     | cat /etc/os-release:
[2025-07-27 20:19:00] NAME="CentOS Linux"
[2025-07-27 20:19:00] VERSION="7 (Core)"
[2025-07-27 20:19:00] ID="centos"
[2025-07-27 20:19:00] ID_LIKE="rhel fedora"
[2025-07-27 20:19:00] VERSION_ID="7"
[2025-07-27 20:19:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:19:00] ANSI_COLOR="0;31"
[2025-07-27 20:19:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:19:00] HOME_URL="https://www.centos.org/"
[2025-07-27 20:19:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:19:00] 
[2025-07-27 20:19:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:19:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:19:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:19:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:19:00] 
[2025-07-27 20:19:00] 2025-07-28 00:18:28,168 | INFO     | ***************************************
[2025-07-27 20:19:00] 2025-07-28 00:18:28,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 20:19:00] 2025-07-28 00:18:28,752 | INFO     | sufficient remaining disk space (75785830400 B)
[2025-07-27 20:19:00] 2025-07-28 00:18:28,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:19:00] 2025-07-28 00:18:28,753 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:19:00] 2025-07-28 00:18:28,758 | INFO     | update_server=False
[2025-07-27 20:19:00] 2025-07-28 00:18:28,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:19:00] 2025-07-28 00:18:28,858 | INFO     | all payload control threads have been joined
[2025-07-27 20:19:00] 2025-07-28 00:18:28,881 | INFO     | all job control threads have been joined
[2025-07-27 20:19:00] 2025-07-28 00:18:28,938 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:19:00] 2025-07-28 00:18:28,938 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:19:00] 2025-07-28 00:18:28,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:19:00] 2025-07-28 00:18:28,938 | INFO     | will abort loop
[2025-07-27 20:19:00] 2025-07-28 00:18:29,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:19:00] 2025-07-28 00:18:29,205 | INFO     | all data control threads have been joined
[2025-07-27 20:19:00] 2025-07-28 00:18:29,763 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:29,780 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:29,864 | INFO     | [payload] control thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:29,887 | INFO     | [job] control thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:29,943 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:29,972 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:30,012 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:30,212 | INFO     | [data] control thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:30,242 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:30,470 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:30,483 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:30,839 | INFO     | [job] validate thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:31,163 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:31,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:19:00] 2025-07-28 00:18:32,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:19:00] 2025-07-28 00:18:32,343 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:36,218 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:39,790 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:19:00] 2025-07-28 00:18:40,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:19:00] 2025-07-28 00:18:41,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755854440256)>', '<ExcThread(monitor, started 139755509491456)>']
[2025-07-27 20:19:00] 2025-07-28 00:18:46,952 | INFO     | all workflow threads have been joined
[2025-07-27 20:19:00] 2025-07-28 00:18:46,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:19:00] 2025-07-28 00:18:46,956 | INFO     | traces error code: 0
[2025-07-27 20:19:00] 2025-07-28 00:18:46,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:19:00] 2025-07-28 00:18:59,545 | INFO     | PID=3246459 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:19:00] 2025-07-28 00:18:59,546 | INFO     | .. there are 14 such processes running
[2025-07-27 20:19:00] 2025-07-28 00:18:59,547 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:19:00] 2025-07-28 00:18:59,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:19:00] 2025-07-28 00:18:59,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:19:00] 2025-07-28 00:18:59,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:19:00] 2025-07-28 00:18:59,547 | INFO     | [monitor] control thread has ended
[2025-07-27 20:19:00] 2025-07-28 00:18:59,725 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:19:00] 2025-07-28 00:18:59,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:19:00] 2025-07-28 00:18:59,731 [wrapper] pilotpid: 3246459
[2025-07-27 20:19:00] 2025-07-28 00:18:59,733 [wrapper] Pilot exit status: 0
[2025-07-27 20:19:00] 2025-07-28 00:18:59,751 [wrapper] pandaids: 6747413396
[2025-07-27 20:19:00] 2025-07-28 00:18:59,901 [wrapper] cleanup supervisor_pilot 3857101 3246460
[2025-07-27 20:19:00] 2025-07-28 00:18:59,920 [wrapper] Test setup, not cleaning
[2025-07-27 20:19:00] 2025-07-28 00:18:59,928 [wrapper] apfmon messages muted
[2025-07-27 20:19:00] 2025-07-28 00:18:59,933 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:19:00] 2025-07-28 00:18:59,936 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:19:00]  *** Error codes and diagnostics ***
[2025-07-27 20:19:00]     "exeErrorCode": 0,
[2025-07-27 20:19:00]     "exeErrorDiag": "",
[2025-07-27 20:19:00]     "pilotErrorCode": 0,
[2025-07-27 20:19:00]     "pilotErrorDiag": "",
[2025-07-27 20:19:00]  *** Listing of results directory ***
[2025-07-27 20:19:00] total 345680
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:41 pilot3.tar.gz
[2025-07-27 20:19:00] -rwx------. 1 boincer umatlas     36292 Jul 27 10:44 runpilot2-wrapper.sh
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:44 queuedata.json
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:19:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:43 run_atlas
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:43 job.xml
[2025-07-27 20:19:00] -rw-r--r--. 2 boincer umatlas 143039652 Jul 27 18:43 EVNT.45743347._002791.pool.root.1
[2025-07-27 20:19:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:43 start_atlas.sh
[2025-07-27 20:19:00] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:43 shared
[2025-07-27 20:19:00] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 18:43 input.tar.gz
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:43 boinc_lockfile
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 18:43 pandaJob.out
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas    980109 Jul 27 18:43 agis_schedconf.cvmfs.json
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:19:00] drwx------. 4 boincer umatlas      4096 Jul 27 18:43 pilot3
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas      6932 Jul 27 20:12 init_data.xml
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:17 boinc_task_state.xml
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas 205356650 Jul 27 20:17 HITS.45743349._050170.pool.root.1
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas      1035 Jul 27 20:18 memory_monitor_summary.json
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas    309333 Jul 27 20:18 log.45743349._050170.job.log.tgz.1
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas      7779 Jul 27 20:18 heartbeat.json
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:18 boinc_mmap_file
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:18 wrapper_checkpoint.txt
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas        95 Jul 27 20:18 pilot_heartbeat.json
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas       823 Jul 27 20:18 pilotlog.txt
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas    541428 Jul 27 20:18 log.45743349._050170.job.log.1
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas       357 Jul 27 20:19 output.list
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:19 runtime_log
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas    870400 Jul 27 20:19 result.tar.gz
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas       653 Jul 27 20:19 wt8KDmDnH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmBh2KDmnf21Ym.diag
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 20:19 runtime_log.err
[2025-07-27 20:19:00] -rw-r--r--. 1 boincer umatlas     22083 Jul 27 20:19 stderr.txt
[2025-07-27 20:19:00] HITS file was successfully produced:
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas 205356650 Jul 27 20:17 shared/HITS.pool.root.1
[2025-07-27 20:19:00]  *** Contents of shared directory: ***
[2025-07-27 20:19:00] total 341640
[2025-07-27 20:19:00] -rw-r--r--. 2 boincer umatlas 143039652 Jul 27 18:43 ATLAS.root_0
[2025-07-27 20:19:00] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:43 start_atlas.sh
[2025-07-27 20:19:00] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 18:43 input.tar.gz
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas 205356650 Jul 27 20:17 HITS.pool.root.1
[2025-07-27 20:19:00] -rw-------. 1 boincer umatlas    870400 Jul 27 20:19 result.tar.gz
20:19:01 (3233671): run_atlas exited; CPU time 37473.806862
20:19:01 (3233671): called boinc_finish(0)

</stderr_txt>
]]>

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