Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:29:23 (412044): wrapper (7.7.26015): starting
18:29:23 (412044): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:29:23] Arguments: --nthreads 8
[2025-07-27 18:29:23] Threads: 8
[2025-07-27 18:29:23] Checking for CVMFS
[2025-07-27 18:29:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:29:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:29:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:29:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:29:24] 2.13.1.0 645510 14785 263100 148827 3 196 37102147 40960000 9517 16776704 0 51928356 99.795 41430725 36980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:29:24] CVMFS is ok
[2025-07-27 18:29:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:29:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:29:24] Further information can be found at the LHC@home message board.
[2025-07-27 18:29:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:29:24] Checking for apptainer binary...
[2025-07-27 18:29:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:29:24] Running /usr/bin/apptainer --version
[2025-07-27 18:29:24] apptainer version 1.4.1-1.el9
[2025-07-27 18:29:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:29:24] c-212-5.aglt2.org
[2025-07-27 18:29:24] apptainer works
[2025-07-27 18:29:24] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:29:24] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:29:24] Starting ATLAS job with PandaID=6747548966
[2025-07-27 18:29:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:52:37]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:52:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:52:37]  replicas=None
[2025-07-27 19:52:37]  scope=mc23_13p6TeV
[2025-07-27 19:52:37]  status=None
[2025-07-27 19:52:37]  status_code=0
[2025-07-27 19:52:37]  storage_token=
[2025-07-27 19:52:37]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6747548966/log.45743349._052833.job.log.tgz.1
[2025-07-27 19:52:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/c6/log.45743349._052833.job.log.tgz.1
[2025-07-27 19:52:37]  workdir=None
[2025-07-27 19:52:37] ]
[2025-07-27 19:52:37] 2025-07-27 23:51:57,869 | INFO     | transferring file log.45743349._052833.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6747548966/log.45743349._052833.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:52:37] 2025-07-27 23:51:57,870 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6747548966/log.45743349._052833.job.log.tgz.1 /tmp/boinchome/slots/4/log.45743349._052833.job
[2025-07-27 19:52:37] 2025-07-27 23:51:57,896 | INFO     | adding to output.list: log.45743349._052833.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/c6/log.45743349._052833.job.log.tg
[2025-07-27 19:52:37] 2025-07-27 23:51:57,897 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:52:37] 2025-07-27 23:51:57,897 | INFO     | summary of transferred files:
[2025-07-27 19:52:37] 2025-07-27 23:51:57,897 | INFO     |  -- lfn=log.45743349._052833.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:52:37] 2025-07-27 23:51:57,897 | INFO     | stage-out finished correctly
[2025-07-27 19:52:37] 2025-07-27 23:51:57,983 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:52:37] 2025-07-27 23:51:59,583 | INFO     | monitor loop #364: job 0:6747548966 is in state 'finished'
[2025-07-27 19:52:37] 2025-07-27 23:51:59,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:52:37] 2025-07-27 23:52:00,030 | INFO     | job 6747548966 has state=finished
[2025-07-27 19:52:37] 2025-07-27 23:52:00,030 | INFO     | preparing for final server update for job 6747548966 in state='finished'
[2025-07-27 19:52:37] 2025-07-27 23:52:00,030 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:52:37] 2025-07-27 23:52:00,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:52:37] 2025-07-27 23:52:00,031 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:52:37] 2025-07-27 23:52:00,031 | INFO     | job 6747548966 has finished - writing final server update
[2025-07-27 19:52:37] 2025-07-27 23:52:00,031 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:52:37] 2025-07-27 23:52:00,033 | INFO     | executing command: lscpu
[2025-07-27 19:52:37] 2025-07-27 23:52:00,096 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:52:37] 2025-07-27 23:52:02,087 | INFO     | monitor loop #365: job 0:6747548966 is in state 'finished'
[2025-07-27 19:52:37] 2025-07-27 23:52:02,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,590 | INFO     | monitor loop #366: job 0:6747548966 is in state 'finished'
[2025-07-27 19:52:37] 2025-07-27 23:52:04,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,779 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:52:37] 2025-07-27 23:52:04,784 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3296.9888958333327
[2025-07-27 19:52:37] 2025-07-27 23:52:04,799 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6747548966/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,800 | INFO     | extracted standard info from prmon json
[2025-07-27 19:52:37] 2025-07-27 23:52:04,800 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:52:37] 2025-07-27 23:52:04,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:52:37] 2025-07-27 23:52:04,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:52:37] 2025-07-27 23:52:04,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:52:37] 2025-07-27 23:52:04,802 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:52:37] 2025-07-27 23:52:04,802 | INFO     | sum of square deviations: 125630262.5
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | sum of deviations: -3838295680.0000005
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | mean x: 1753657941.5
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | mean y: 2566738.3513513515
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | -- intersect: 53580881127.82533
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | intersect: 53580881127.82533
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | chi2: 0.0049953779008198975
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | -- intersect: 53580881127.82533
[2025-07-27 19:52:37] 2025-07-27 23:52:04,803 | INFO     | current memory leak: -30.55 B/s (using 74 data points, chi2=0.00)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | could have reported an average CPU frequency of 3296 MHz (6 samples)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | ..............................
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . Timing measurements:
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . get job = 0 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . initial setup = 2 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . payload setup = 9 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . stage-in = 0 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . payload execution = 4910 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . stage-out = 0 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | . log creation = 0 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,804 | INFO     | ..............................
[2025-07-27 19:52:37] 2025-07-27 23:52:04,884 | INFO     | 
[2025-07-27 19:52:37] 2025-07-27 23:52:04,884 | INFO     | job summary report
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | --------------------------------------------------
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | PanDA job id: 6747548966
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | task id: 45743349
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | errors: (none)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | pilot state: finished 
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | transexitcode: 0
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | exeerrorcode: 0
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | exeerrordiag: 
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | exitcode: 0
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | exitmsg: OK
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | cpuconsumptiontime: 34819 s
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | nevents: 400
[2025-07-27 19:52:37] 2025-07-27 23:52:04,885 | INFO     | neventsw: 0
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | pid: 423747
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | pgrp: 423747
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | corecount: 8
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | event service: False
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | sizes: {0: 2397248, 1: 2397503, 7: 2397765, 12: 2397793, 4923: 2423928, 4924: 2433110, 4931: 2433248}
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | --------------------------------------------------
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | 
[2025-07-27 19:52:37] 2025-07-27 23:52:04,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-07-27 19:52:37] 2025-07-27 23:52:04,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | job 6747548966 has completed (purged errors)
[2025-07-27 19:52:37] 2025-07-27 23:52:04,914 | INFO     | overall cleanup function is called
[2025-07-27 19:52:37] 2025-07-27 23:52:05,923 | INFO     | --- collectZombieJob: --- 10, [423747]
[2025-07-27 19:52:37] 2025-07-27 23:52:05,923 | INFO     | zombie collector waiting for pid 423747
[2025-07-27 19:52:37] 2025-07-27 23:52:05,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:52:37] 2025-07-27 23:52:05,923 | INFO     | collected zombie processes
[2025-07-27 19:52:37] 2025-07-27 23:52:05,924 | INFO     | will attempt to kill all subprocesses of pid=423747
[2025-07-27 19:52:37] 2025-07-27 23:52:06,283 | INFO     | process IDs to be killed: [423747] (in reverse order)
[2025-07-27 19:52:37] 2025-07-27 23:52:06,385 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:52:37] 2025-07-27 23:52:06,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:52:37] 2025-07-27 23:52:06,396 | INFO     | did not find any defunct processes belonging to 423747
[2025-07-27 19:52:37] 2025-07-27 23:52:06,404 | INFO     | did not find any defunct processes belonging to 423747
[2025-07-27 19:52:37] 2025-07-27 23:52:06,404 | INFO     | ready for new job
[2025-07-27 19:52:37] 2025-07-27 23:52:06,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:52:37] 2025-07-27 23:52:06,406 | INFO     | ***************************************
[2025-07-27 19:52:37] 2025-07-27 23:52:06,406 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:52:37] 2025-07-27 23:52:06,406 | INFO     | ***************************************
[2025-07-27 19:52:37] 2025-07-27 23:52:06,406 | INFO     | 
[2025-07-27 19:52:37] 2025-07-27 23:52:06,409 | INFO     | architecture information:
[2025-07-27 19:52:37] 2025-07-27 23:52:06,410 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:52:37] 2025-07-27 23:52:06,429 | INFO     | cat /etc/os-release:
[2025-07-27 19:52:37] NAME="CentOS Linux"
[2025-07-27 19:52:37] VERSION="7 (Core)"
[2025-07-27 19:52:37] ID="centos"
[2025-07-27 19:52:37] ID_LIKE="rhel fedora"
[2025-07-27 19:52:37] VERSION_ID="7"
[2025-07-27 19:52:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:52:37] ANSI_COLOR="0;31"
[2025-07-27 19:52:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:52:37] HOME_URL="https://www.centos.org/"
[2025-07-27 19:52:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:52:37] 
[2025-07-27 19:52:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:52:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:52:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:52:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:52:37] 
[2025-07-27 19:52:37] 2025-07-27 23:52:06,429 | INFO     | ***************************************
[2025-07-27 19:52:37] 2025-07-27 23:52:06,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-07-27 19:52:37] 2025-07-27 23:52:06,958 | INFO     | sufficient remaining disk space (124999696384 B)
[2025-07-27 19:52:37] 2025-07-27 23:52:06,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:52:37] 2025-07-27 23:52:06,959 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:52:37] 2025-07-27 23:52:06,959 | INFO     | update_server=False
[2025-07-27 19:52:37] 2025-07-27 23:52:06,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:52:37] 2025-07-27 23:52:06,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:52:37] 2025-07-27 23:52:07,095 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 19:52:37] 2025-07-27 23:52:07,095 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 19:52:37] 2025-07-27 23:52:07,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:52:37] 2025-07-27 23:52:07,096 | INFO     | will abort loop
[2025-07-27 19:52:37] 2025-07-27 23:52:07,107 | INFO     | all payload control threads have been joined
[2025-07-27 19:52:37] 2025-07-27 23:52:07,326 | INFO     | all data control threads have been joined
[2025-07-27 19:52:37] 2025-07-27 23:52:07,960 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,077 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,099 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,113 | INFO     | [payload] control thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,115 | INFO     | all job control threads have been joined
[2025-07-27 19:52:37] 2025-07-27 23:52:08,214 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,332 | INFO     | [data] control thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:52:37] 2025-07-27 23:52:08,794 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,799 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,966 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:08,993 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:09,120 | INFO     | [job] control thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:09,387 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:09,429 | INFO     | [job] validate thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:09,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:52:37] 2025-07-27 23:52:10,902 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:12,582 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:17,117 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:52:37] 2025-07-27 23:52:18,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:52:37] 2025-07-27 23:52:18,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024499140416)>', '<ExcThread(monitor, started 140023693297408)>']
[2025-07-27 19:52:37] 2025-07-27 23:52:24,002 | INFO     | all workflow threads have been joined
[2025-07-27 19:52:37] 2025-07-27 23:52:24,002 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:52:37] 2025-07-27 23:52:24,002 | INFO     | traces error code: 0
[2025-07-27 19:52:37] 2025-07-27 23:52:24,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:52:37] 2025-07-27 23:52:36,893 | INFO     | PID=415653 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:52:37] 2025-07-27 23:52:36,893 | INFO     | .. there are 14 such processes running
[2025-07-27 19:52:37] 2025-07-27 23:52:36,894 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:52:37] 2025-07-27 23:52:36,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:52:37] 2025-07-27 23:52:36,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:52:37] 2025-07-27 23:52:36,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:52:37] 2025-07-27 23:52:36,894 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 19:52:37] 2025-07-27 23:52:36,894 | INFO     | [monitor] control thread has ended
[2025-07-27 19:52:37] 2025-07-27 23:52:37,063 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:52:37] 2025-07-27 23:52:37,068 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:52:37] 2025-07-27 23:52:37,072 [wrapper] pilotpid: 415653
[2025-07-27 19:52:37] 2025-07-27 23:52:37,078 [wrapper] Pilot exit status: 0
[2025-07-27 19:52:37] 2025-07-27 23:52:37,090 [wrapper] pandaids: 6747548966
[2025-07-27 19:52:37] 2025-07-27 23:52:37,172 [wrapper] cleanup supervisor_pilot  671021 415654
[2025-07-27 19:52:37] 2025-07-27 23:52:37,179 [wrapper] Test setup, not cleaning
[2025-07-27 19:52:37] 2025-07-27 23:52:37,184 [wrapper] apfmon messages muted
[2025-07-27 19:52:37] 2025-07-27 23:52:37,188 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:52:37] 2025-07-27 23:52:37,191 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:52:37]  *** Error codes and diagnostics ***
[2025-07-27 19:52:37]     "exeErrorCode": 0,
[2025-07-27 19:52:37]     "exeErrorDiag": "",
[2025-07-27 19:52:37]     "pilotErrorCode": 0,
[2025-07-27 19:52:37]     "pilotErrorDiag": "",
[2025-07-27 19:52:37]  *** Listing of results directory ***
[2025-07-27 19:52:37] total 352520
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 19:52:37] -rwx------. 1 boincer umatlas     36292 Jul 27 13:24 runpilot2-wrapper.sh
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 13:24 queuedata.json
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:52:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:29 run_atlas
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:29 job.xml
[2025-07-27 19:52:37] -rw-r--r--. 2 boincer umatlas 145879506 Jul 27 18:29 EVNT.45743347._002825.pool.root.1
[2025-07-27 19:52:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:29 start_atlas.sh
[2025-07-27 19:52:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:29 shared
[2025-07-27 19:52:37] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 18:29 input.tar.gz
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:29 boinc_lockfile
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:29 pandaJob.out
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas    980109 Jul 27 18:29 agis_schedconf.cvmfs.json
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:29 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:52:37] drwx------. 4 boincer umatlas      4096 Jul 27 18:29 pilot3
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 19:45 init_data.xml
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas 209643943 Jul 27 19:51 HITS.45743349._052833.pool.root.1
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:51 boinc_task_state.xml
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas      1024 Jul 27 19:51 memory_monitor_summary.json
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas    304940 Jul 27 19:51 log.45743349._052833.job.log.tgz.1
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas      7764 Jul 27 19:52 heartbeat.json
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:52 boinc_mmap_file
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:52 wrapper_checkpoint.txt
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas       892 Jul 27 19:52 pilotlog.txt
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas        95 Jul 27 19:52 pilot_heartbeat.json
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas    482494 Jul 27 19:52 log.45743349._052833.job.log.1
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas       357 Jul 27 19:52 output.list
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:52 runtime_log
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas    808960 Jul 27 19:52 result.tar.gz
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:52 runtime_log.err
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas       650 Jul 27 19:52 FmcMDmeHK07n9Rq4apOajLDm4fhM0noT9bVof3QYDmap2KDmmHJ5Cn.diag
[2025-07-27 19:52:37] -rw-r--r--. 1 boincer umatlas     21835 Jul 27 19:52 stderr.txt
[2025-07-27 19:52:37] HITS file was successfully produced:
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas 209643943 Jul 27 19:51 shared/HITS.pool.root.1
[2025-07-27 19:52:37]  *** Contents of shared directory: ***
[2025-07-27 19:52:37] total 348544
[2025-07-27 19:52:37] -rw-r--r--. 2 boincer umatlas 145879506 Jul 27 18:29 ATLAS.root_0
[2025-07-27 19:52:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:29 start_atlas.sh
[2025-07-27 19:52:37] -rw-r--r--. 2 boincer umatlas    542900 Jul 27 18:29 input.tar.gz
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas 209643943 Jul 27 19:51 HITS.pool.root.1
[2025-07-27 19:52:37] -rw-------. 1 boincer umatlas    808960 Jul 27 19:52 result.tar.gz
19:52:38 (412044): run_atlas exited; CPU time 34942.433963
19:52:38 (412044): called boinc_finish(0)

</stderr_txt>
]]>

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