Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:38 (28950): wrapper (7.7.26015): starting
18:40:38 (28950): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:40:38] Arguments: --nthreads 8
[2025-07-27 18:40:38] Threads: 8
[2025-07-27 18:40:38] Checking for CVMFS
[2025-07-27 18:40:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:40:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:40:38] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:40:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:40:38] 2.11.2.0 1598 105935 118896 148827 0 59 20215729 20275201 917 130560 0 75516578 99.986 8207933 9301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:40:38] CVMFS is ok
[2025-07-27 18:40:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:40:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:40:38] Further information can be found at the LHC@home message board.
[2025-07-27 18:40:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:40:38] Checking for apptainer binary...
[2025-07-27 18:40:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:40:38] Running /usr/bin/apptainer --version
[2025-07-27 18:40:38] apptainer version 1.3.2-1.el7
[2025-07-27 18:40:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:40:39] c-205-36.aglt2.org
[2025-07-27 18:40:39] apptainer works
[2025-07-27 18:40:39] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:40:39] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:40:39] Starting ATLAS job with PandaID=6747271226
[2025-07-27 18:40:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:57:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:57:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:57:20]  replicas=None
[2025-07-27 19:57:20]  scope=mc23_13p6TeV
[2025-07-27 19:57:20]  status=None
[2025-07-27 19:57:20]  status_code=0
[2025-07-27 19:57:20]  storage_token=
[2025-07-27 19:57:20]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747271226/log.45743349._046752.job.log.tgz.1
[2025-07-27 19:57:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/53/log.45743349._046752.job.log.tgz.1
[2025-07-27 19:57:20]  workdir=None
[2025-07-27 19:57:20] ]
[2025-07-27 19:57:20] 2025-07-27 23:56:52,611 | INFO     | transferring file log.45743349._046752.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747271226/log.45743349._046752.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:57:20] 2025-07-27 23:56:52,611 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747271226/log.45743349._046752.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._046752.job
[2025-07-27 19:57:20] 2025-07-27 23:56:52,631 | INFO     | adding to output.list: log.45743349._046752.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/53/log.45743349._046752.job.log.tg
[2025-07-27 19:57:20] 2025-07-27 23:56:52,632 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:57:20] 2025-07-27 23:56:52,632 | INFO     | summary of transferred files:
[2025-07-27 19:57:20] 2025-07-27 23:56:52,632 | INFO     |  -- lfn=log.45743349._046752.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:57:20] 2025-07-27 23:56:52,632 | INFO     | stage-out finished correctly
[2025-07-27 19:57:20] 2025-07-27 23:56:54,284 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:57:20] 2025-07-27 23:56:55,365 | WARNING  | process 6804 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 19:57:20] 2025-07-27 23:56:55,365 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747271226/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:57:20] 2025-07-27 23:56:55,577 | INFO     | number of running child processes to parent process 6804: 1
[2025-07-27 19:57:20] 2025-07-27 23:56:55,578 | INFO     | maximum number of monitored processes: 6
[2025-07-27 19:57:20] 2025-07-27 23:56:55,605 | INFO     | PID=32563 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 19:57:20] 2025-07-27 23:56:55,605 | INFO     | .. there are 2 such processes running
[2025-07-27 19:57:20] 2025-07-27 23:56:55,699 | INFO     | job 6747271226 has state=finished
[2025-07-27 19:57:20] 2025-07-27 23:56:55,699 | INFO     | preparing for final server update for job 6747271226 in state='finished'
[2025-07-27 19:57:20] 2025-07-27 23:56:55,700 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:57:20] 2025-07-27 23:56:55,700 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:57:20] 2025-07-27 23:56:55,700 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:57:20] 2025-07-27 23:56:55,700 | INFO     | job 6747271226 has finished - writing final server update
[2025-07-27 19:57:20] 2025-07-27 23:56:55,701 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:57:20] 2025-07-27 23:56:55,701 | INFO     | executing command: lscpu
[2025-07-27 19:57:20] 2025-07-27 23:56:55,732 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:57:20] 2025-07-27 23:56:58,080 | INFO     | monitor loop #340: job 0:6747271226 is in state 'finished'
[2025-07-27 19:57:20] 2025-07-27 23:56:58,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,583 | INFO     | monitor loop #341: job 0:6747271226 is in state 'finished'
[2025-07-27 19:57:20] 2025-07-27 23:57:00,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,735 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:57:20] 2025-07-27 23:57:00,738 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2105.538375
[2025-07-27 19:57:20] 2025-07-27 23:57:00,741 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747271226/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,742 | INFO     | extracted standard info from prmon json
[2025-07-27 19:57:20] 2025-07-27 23:57:00,742 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:57:20] 2025-07-27 23:57:00,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:57:20] 2025-07-27 23:57:00,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:57:20] 2025-07-27 23:57:00,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:57:20] 2025-07-27 23:57:00,745 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:57:20] 2025-07-27 23:57:00,745 | INFO     | sum of square deviations: 97479037.0
[2025-07-27 19:57:20] 2025-07-27 23:57:00,745 | INFO     | sum of deviations: -9368873642.5
[2025-07-27 19:57:20] 2025-07-27 23:57:00,745 | INFO     | mean x: 1753658424.5
[2025-07-27 19:57:20] 2025-07-27 23:57:00,746 | INFO     | mean y: 2632968.632352941
[2025-07-27 19:57:20] 2025-07-27 23:57:00,746 | INFO     | -- intersect: 168549683666.78528
[2025-07-27 19:57:20] 2025-07-27 23:57:00,746 | INFO     | intersect: 168549683666.78528
[2025-07-27 19:57:20] 2025-07-27 23:57:00,746 | INFO     | chi2: 0.0626317724710205
[2025-07-27 19:57:20] 2025-07-27 23:57:00,746 | INFO     | -- intersect: 168549683666.78528
[2025-07-27 19:57:20] 2025-07-27 23:57:00,746 | INFO     | current memory leak: -96.11 B/s (using 68 data points, chi2=0.06)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | could have reported an average CPU frequency of 2248 MHz (6 samples)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | ..............................
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . Timing measurements:
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . get job = 0 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . initial setup = 2 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . payload setup = 7 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . stage-in = 0 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . payload execution = 4535 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . stage-out = 0 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,747 | INFO     | . log creation = 0 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,748 | INFO     | ..............................
[2025-07-27 19:57:20] 2025-07-27 23:57:00,822 | INFO     | 
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | job summary report
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | --------------------------------------------------
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | PanDA job id: 6747271226
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | task id: 45743349
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | errors: (none)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | pilot state: finished 
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | transexitcode: 0
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | exeerrorcode: 0
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | exeerrordiag: 
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | exitcode: 0
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | exitmsg: OK
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | cpuconsumptiontime: 33755 s
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | nevents: 400
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | neventsw: 0
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | pid: 6804
[2025-07-27 19:57:20] 2025-07-27 23:57:00,823 | INFO     | pgrp: 6804
[2025-07-27 19:57:20] 2025-07-27 23:57:00,824 | INFO     | corecount: 8
[2025-07-27 19:57:20] 2025-07-27 23:57:00,824 | INFO     | event service: False
[2025-07-27 19:57:20] 2025-07-27 23:57:00,824 | INFO     | sizes: {0: 2397252, 1: 2397451, 5: 2397713, 11: 2397769, 4545: 2424011, 4546: 2424010, 4547: 2433192, 4548: 2433248, 4555: 2433442}
[2025-07-27 19:57:20] 2025-07-27 23:57:00,824 | INFO     | --------------------------------------------------
[2025-07-27 19:57:20] 2025-07-27 23:57:00,824 | INFO     | 
[2025-07-27 19:57:20] 2025-07-27 23:57:00,824 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 19:57:20] 2025-07-27 23:57:00,839 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,839 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,839 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,839 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | job 6747271226 has completed (purged errors)
[2025-07-27 19:57:20] 2025-07-27 23:57:00,841 | INFO     | overall cleanup function is called
[2025-07-27 19:57:20] 2025-07-27 23:57:01,849 | INFO     | --- collectZombieJob: --- 10, [6804]
[2025-07-27 19:57:20] 2025-07-27 23:57:01,850 | INFO     | zombie collector waiting for pid 6804
[2025-07-27 19:57:20] 2025-07-27 23:57:01,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:57:20] 2025-07-27 23:57:01,850 | INFO     | collected zombie processes
[2025-07-27 19:57:20] 2025-07-27 23:57:01,850 | INFO     | will attempt to kill all subprocesses of pid=6804
[2025-07-27 19:57:20] 2025-07-27 23:57:01,979 | INFO     | process IDs to be killed: [6804] (in reverse order)
[2025-07-27 19:57:20] 2025-07-27 23:57:02,034 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:57:20] 2025-07-27 23:57:02,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:57:20] 2025-07-27 23:57:02,039 | INFO     | did not find any defunct processes belonging to 6804
[2025-07-27 19:57:20] 2025-07-27 23:57:02,042 | INFO     | did not find any defunct processes belonging to 6804
[2025-07-27 19:57:20] 2025-07-27 23:57:02,043 | INFO     | ready for new job
[2025-07-27 19:57:20] 2025-07-27 23:57:02,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:57:20] 2025-07-27 23:57:02,045 | INFO     | ***************************************
[2025-07-27 19:57:20] 2025-07-27 23:57:02,045 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:57:20] 2025-07-27 23:57:02,045 | INFO     | ***************************************
[2025-07-27 19:57:20] 2025-07-27 23:57:02,045 | INFO     | 
[2025-07-27 19:57:20] 2025-07-27 23:57:02,046 | INFO     | architecture information:
[2025-07-27 19:57:20] 2025-07-27 23:57:02,047 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:57:20] 2025-07-27 23:57:02,061 | INFO     | cat /etc/os-release:
[2025-07-27 19:57:20] NAME="CentOS Linux"
[2025-07-27 19:57:20] VERSION="7 (Core)"
[2025-07-27 19:57:20] ID="centos"
[2025-07-27 19:57:20] ID_LIKE="rhel fedora"
[2025-07-27 19:57:20] VERSION_ID="7"
[2025-07-27 19:57:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:57:20] ANSI_COLOR="0;31"
[2025-07-27 19:57:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:57:20] HOME_URL="https://www.centos.org/"
[2025-07-27 19:57:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:57:20] 
[2025-07-27 19:57:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:57:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:57:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:57:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:57:20] 
[2025-07-27 19:57:20] 2025-07-27 23:57:02,061 | INFO     | ***************************************
[2025-07-27 19:57:20] 2025-07-27 23:57:02,564 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 19:57:20] 2025-07-27 23:57:02,581 | INFO     | sufficient remaining disk space (32881246208 B)
[2025-07-27 19:57:20] 2025-07-27 23:57:02,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:57:20] 2025-07-27 23:57:02,582 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:57:20] 2025-07-27 23:57:02,582 | INFO     | update_server=False
[2025-07-27 19:57:20] 2025-07-27 23:57:02,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:57:20] 2025-07-27 23:57:02,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:57:20] 2025-07-27 23:57:02,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:57:20] 2025-07-27 23:57:02,583 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 19:57:20] 2025-07-27 23:57:02,583 | INFO     | aborting loop
[2025-07-27 19:57:20] 2025-07-27 23:57:02,584 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:57:20] 2025-07-27 23:57:02,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:57:20] 2025-07-27 23:57:02,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:57:20] 2025-07-27 23:57:03,062 | INFO     | all data control threads have been joined
[2025-07-27 19:57:20] 2025-07-27 23:57:03,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:57:20] 2025-07-27 23:57:03,378 | INFO     | all job control threads have been joined
[2025-07-27 19:57:20] 2025-07-27 23:57:03,438 | INFO     | all payload control threads have been joined
[2025-07-27 19:57:20] 2025-07-27 23:57:03,584 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:03,587 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:03,590 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:03,663 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,064 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,068 | INFO     | [data] control thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,294 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,383 | INFO     | [job] control thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,444 | INFO     | [payload] control thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,809 | INFO     | [job] validate thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:57:20] 2025-07-27 23:57:04,885 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,905 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:04,920 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:05,203 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:08,882 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:12,993 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:57:20] 2025-07-27 23:57:13,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:57:20] 2025-07-27 23:57:15,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803259393856)>', '<ExcThread(monitor, started 139802947065600)>']
[2025-07-27 19:57:20] 2025-07-27 23:57:15,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:57:20] 2025-07-27 23:57:15,644 | INFO     | [monitor] control thread has ended
[2025-07-27 19:57:20] 2025-07-27 23:57:20,469 | INFO     | all workflow threads have been joined
[2025-07-27 19:57:20] 2025-07-27 23:57:20,469 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:57:20] 2025-07-27 23:57:20,470 | INFO     | traces error code: 0
[2025-07-27 19:57:20] 2025-07-27 23:57:20,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:57:20] 2025-07-27 23:57:20,571 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:57:20] 2025-07-27 23:57:20,575 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:57:20] 2025-07-27 23:57:20,578 [wrapper] pilotpid: 32563
[2025-07-27 19:57:20] 2025-07-27 23:57:20,582 [wrapper] Pilot exit status: 0
[2025-07-27 19:57:20] 2025-07-27 23:57:20,593 [wrapper] pandaids: 6747271226
[2025-07-27 19:57:20] 2025-07-27 23:57:20,634 [wrapper] cleanup supervisor_pilot 21627 32564
[2025-07-27 19:57:20] 2025-07-27 23:57:20,638 [wrapper] Test setup, not cleaning
[2025-07-27 19:57:20] 2025-07-27 23:57:20,642 [wrapper] apfmon messages muted
[2025-07-27 19:57:20] 2025-07-27 23:57:20,645 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:57:20] 2025-07-27 23:57:20,648 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:57:20]  *** Error codes and diagnostics ***
[2025-07-27 19:57:20]     "exeErrorCode": 0,
[2025-07-27 19:57:20]     "exeErrorDiag": "",
[2025-07-27 19:57:20]     "pilotErrorCode": 0,
[2025-07-27 19:57:20]     "pilotErrorDiag": "",
[2025-07-27 19:57:20]  *** Listing of results directory ***
[2025-07-27 19:57:20] total 352056
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 06:10 pilot3.tar.gz
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 06:20 queuedata.json
[2025-07-27 19:57:20] -rwx------ 1 boincer umatlas     36292 Jul 27 06:20 runpilot2-wrapper.sh
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas       100 Jul 27 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:57:20] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 18:40 run_atlas
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas       105 Jul 27 18:40 job.xml
[2025-07-27 19:57:20] -rw-r--r-- 2 boincer umatlas 147657159 Jul 27 18:40 EVNT.45743347._001854.pool.root.1
[2025-07-27 19:57:20] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:40 start_atlas.sh
[2025-07-27 19:57:20] drwxrwx--x 2 boincer umatlas      4096 Jul 27 18:40 shared
[2025-07-27 19:57:20] -rw-r--r-- 2 boincer umatlas    542898 Jul 27 18:40 input.tar.gz
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas         0 Jul 27 18:40 boinc_lockfile
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 18:40 pandaJob.out
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas    980109 Jul 27 18:40 agis_schedconf.cvmfs.json
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas   1593052 Jul 27 18:40 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:57:20] drwx------ 4 boincer umatlas      4096 Jul 27 18:40 pilot3
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas      6048 Jul 27 19:48 init_data.xml
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas 207468237 Jul 27 19:56 HITS.45743349._046752.pool.root.1
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas        95 Jul 27 19:56 pilot_heartbeat.json
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas        27 Jul 27 19:56 wrapper_checkpoint.txt
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas      1047 Jul 27 19:56 memory_monitor_summary.json
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 19:56 boinc_mmap_file
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas       530 Jul 27 19:56 boinc_task_state.xml
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas    292225 Jul 27 19:56 log.45743349._046752.job.log.tgz.1
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas      7836 Jul 27 19:57 heartbeat.json
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas      4552 Jul 27 19:57 pilotlog.txt
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas    452584 Jul 27 19:57 log.45743349._046752.job.log.1
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas       357 Jul 27 19:57 output.list
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas       620 Jul 27 19:57 runtime_log
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas    768000 Jul 27 19:57 result.tar.gz
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 19:57 runtime_log.err
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas       658 Jul 27 19:57 na0KDmRfD07n9Rq4apOajLDm4fhM0noT9bVof3QYDmwN2KDm70Tbzn.diag
[2025-07-27 19:57:20] -rw-r--r-- 1 boincer umatlas     21897 Jul 27 19:57 stderr.txt
[2025-07-27 19:57:20] HITS file was successfully produced:
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas 207468237 Jul 27 19:56 shared/HITS.pool.root.1
[2025-07-27 19:57:20]  *** Contents of shared directory: ***
[2025-07-27 19:57:20] total 348116
[2025-07-27 19:57:20] -rw-r--r-- 2 boincer umatlas 147657159 Jul 27 18:40 ATLAS.root_0
[2025-07-27 19:57:20] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:40 start_atlas.sh
[2025-07-27 19:57:20] -rw-r--r-- 2 boincer umatlas    542898 Jul 27 18:40 input.tar.gz
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas 207468237 Jul 27 19:56 HITS.pool.root.1
[2025-07-27 19:57:20] -rw------- 1 boincer umatlas    768000 Jul 27 19:57 result.tar.gz
19:57:21 (28950): run_atlas exited; CPU time 33745.255001
19:57:21 (28950): called boinc_finish(0)

</stderr_txt>
]]>

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