Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:25:16 (24658): wrapper (7.7.26015): starting
18:25:16 (24658): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:25:16] Arguments: --nthreads 8
[2025-07-27 18:25:16] Threads: 8
[2025-07-27 18:25:16] Checking for CVMFS
[2025-07-27 18:25:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:25:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:25:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:25:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:25:16] 2.11.2.0 2936 85450 79208 148827 1 57 11402912 20275201 1 130560 0 19689534 99.949 4989339 37228 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:25:16] CVMFS is ok
[2025-07-27 18:25:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:25:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:25:16] Further information can be found at the LHC@home message board.
[2025-07-27 18:25:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:25:16] Checking for apptainer binary...
[2025-07-27 18:25:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:25:16] Running /usr/bin/apptainer --version
[2025-07-27 18:25:16] apptainer version 1.3.2-1.el7
[2025-07-27 18:25:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:25:18] c-204-13.aglt2.org
[2025-07-27 18:25:18] apptainer works
[2025-07-27 18:25:18] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:25:18] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:25:18] Starting ATLAS job with PandaID=6747548459
[2025-07-27 18:25:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:54:12]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:54:12] 2025-07-28 00:53:35,019 | INFO     | monitor loop #656: job 0:6747548459 is in state 'finished'
[2025-07-27 20:54:12] 2025-07-28 00:53:35,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:54:12] 2025-07-28 00:53:37,522 | INFO     | monitor loop #657: job 0:6747548459 is in state 'finished'
[2025-07-27 20:54:12] 2025-07-28 00:53:37,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:54:12] 2025-07-28 00:53:37,680 | INFO     | PID=29082 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:54:12] 2025-07-28 00:53:39,984 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 20:54:12] 2025-07-28 00:53:39,988 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-07-27 20:54:12] 2025-07-28 00:53:39,990 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747548459/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:54:12] 2025-07-28 00:53:39,991 | INFO     | extracted standard info from prmon json
[2025-07-27 20:54:12] 2025-07-28 00:53:39,991 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:54:12] 2025-07-28 00:53:39,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:54:12] 2025-07-28 00:53:39,992 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:54:12] 2025-07-28 00:53:39,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:54:12] 2025-07-28 00:53:39,995 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:54:12] 2025-07-28 00:53:39,996 | INFO     | sum of square deviations: 945282840.0
[2025-07-27 20:54:12] 2025-07-28 00:53:39,997 | INFO     | sum of deviations: -9321715244.0
[2025-07-27 20:54:12] 2025-07-28 00:53:39,997 | INFO     | mean x: 1753659561.0
[2025-07-27 20:54:12] 2025-07-28 00:53:39,997 | INFO     | mean y: 2555294.1103448276
[2025-07-27 20:54:12] 2025-07-28 00:53:39,997 | INFO     | -- intersect: 17295913822.188614
[2025-07-27 20:54:12] 2025-07-28 00:53:39,997 | INFO     | intersect: 17295913822.188614
[2025-07-27 20:54:12] 2025-07-28 00:53:39,997 | INFO     | chi2: 1.706711116879263
[2025-07-27 20:54:12] 2025-07-28 00:53:39,998 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 20:54:12] 2025-07-28 00:53:39,998 | INFO     | sum of deviations: -8387644356.500003
[2025-07-27 20:54:12] 2025-07-28 00:53:39,998 | INFO     | mean x: 1753659408.5
[2025-07-27 20:54:12] 2025-07-28 00:53:39,999 | INFO     | mean y: 2556802.7642857144
[2025-07-27 20:54:12] 2025-07-28 00:53:39,999 | INFO     | -- intersect: 17290562012.398266
[2025-07-27 20:54:12] 2025-07-28 00:53:39,999 | INFO     | intersect: 17290562012.398266
[2025-07-27 20:54:12] 2025-07-28 00:53:39,999 | INFO     | chi2: 1.706720110308298
[2025-07-27 20:54:12] 2025-07-28 00:53:39,999 | INFO     | current chi2=1.706720110308298 (change=-0.0005269450082148043 %)
[2025-07-27 20:54:12] 2025-07-28 00:53:39,999 | INFO     | right removable region: 139
[2025-07-27 20:54:12] 2025-07-28 00:53:40,000 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,000 | INFO     | sum of deviations: -32199589960.5
[2025-07-27 20:54:12] 2025-07-28 00:53:40,000 | INFO     | mean x: 1753659713.5
[2025-07-27 20:54:12] 2025-07-28 00:53:40,001 | INFO     | mean y: 2591657.407142857
[2025-07-27 20:54:12] 2025-07-28 00:53:40,001 | INFO     | -- intersect: 66370066497.99342
[2025-07-27 20:54:12] 2025-07-28 00:53:40,001 | INFO     | intersect: 66370066497.99342
[2025-07-27 20:54:12] 2025-07-28 00:53:40,001 | INFO     | chi2: 0.14647140234721004
[2025-07-27 20:54:12] 2025-07-28 00:53:40,001 | INFO     | current chi2=0.14647140234721004 (change=91.41791478952605 %)
[2025-07-27 20:54:12] 2025-07-28 00:53:40,001 | INFO     | sum of square deviations: 762879420.0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,002 | INFO     | sum of deviations: -30716536763.0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,002 | INFO     | mean x: 1753659866.0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,002 | INFO     | mean y: 2589011.1037037037
[2025-07-27 20:54:12] 2025-07-28 00:53:40,003 | INFO     | -- intersect: 70611857437.54343
[2025-07-27 20:54:12] 2025-07-28 00:53:40,003 | INFO     | intersect: 70611857437.54343
[2025-07-27 20:54:12] 2025-07-28 00:53:40,003 | INFO     | chi2: 0.13068495068254696
[2025-07-27 20:54:12] 2025-07-28 00:53:40,003 | INFO     | current chi2=0.13068495068254696 (change=10.777838821561456 %)
[2025-07-27 20:54:12] 2025-07-28 00:53:40,003 | INFO     | left removable region: 20
[2025-07-27 20:54:12] 2025-07-28 00:53:40,003 | INFO     | sum of square deviations: 522502820.0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,004 | INFO     | sum of deviations: -21749725680.00001
[2025-07-27 20:54:12] 2025-07-28 00:53:40,004 | INFO     | mean x: 1753659988.0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,004 | INFO     | mean y: 2577373.0168067226
[2025-07-27 20:54:12] 2025-07-28 00:53:40,004 | INFO     | -- intersect: 73000506216.71588
[2025-07-27 20:54:12] 2025-07-28 00:53:40,004 | INFO     | intersect: 73000506216.71588
[2025-07-27 20:54:12] 2025-07-28 00:53:40,005 | INFO     | chi2: 0.12210356964952764
[2025-07-27 20:54:12] 2025-07-28 00:53:40,005 | INFO     | -- intersect: 73000506216.71588
[2025-07-27 20:54:12] 2025-07-28 00:53:40,005 | INFO     | current memory leak: -41.63 B/s (using 119 data points, chi2=0.12)
[2025-07-27 20:54:12] 2025-07-28 00:53:40,005 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-07-27 20:54:12] 2025-07-28 00:53:40,005 | INFO     | ..............................
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . Timing measurements:
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . get job = 0 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . initial setup = 2 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . payload setup = 12 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . stage-in = 0 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . payload execution = 8841 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . stage-out = 0 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,006 | INFO     | . log creation = 0 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,007 | INFO     | ..............................
[2025-07-27 20:54:12] 2025-07-28 00:53:40,100 | INFO     | 
[2025-07-27 20:54:12] 2025-07-28 00:53:40,100 | INFO     | job summary report
[2025-07-27 20:54:12] 2025-07-28 00:53:40,100 | INFO     | --------------------------------------------------
[2025-07-27 20:54:12] 2025-07-28 00:53:40,100 | INFO     | PanDA job id: 6747548459
[2025-07-27 20:54:12] 2025-07-28 00:53:40,100 | INFO     | task id: 45743349
[2025-07-27 20:54:12] 2025-07-28 00:53:40,101 | INFO     | errors: (none)
[2025-07-27 20:54:12] 2025-07-28 00:53:40,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:54:12] 2025-07-28 00:53:40,101 | INFO     | pilot state: finished 
[2025-07-27 20:54:12] 2025-07-28 00:53:40,101 | INFO     | transexitcode: 0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,101 | INFO     | exeerrorcode: 0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,102 | INFO     | exeerrordiag: 
[2025-07-27 20:54:12] 2025-07-28 00:53:40,102 | INFO     | exitcode: 0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,102 | INFO     | exitmsg: OK
[2025-07-27 20:54:12] 2025-07-28 00:53:40,102 | INFO     | cpuconsumptiontime: 66767 s
[2025-07-27 20:54:12] 2025-07-28 00:53:40,102 | INFO     | nevents: 400
[2025-07-27 20:54:12] 2025-07-28 00:53:40,102 | INFO     | neventsw: 0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,103 | INFO     | pid: 3292
[2025-07-27 20:54:12] 2025-07-28 00:53:40,103 | INFO     | pgrp: 3292
[2025-07-27 20:54:12] 2025-07-28 00:53:40,103 | INFO     | corecount: 8
[2025-07-27 20:54:12] 2025-07-28 00:53:40,103 | INFO     | event service: False
[2025-07-27 20:54:12] 2025-07-28 00:53:40,103 | INFO     | sizes: {0: 2397304, 1: 2397503, 7: 2397765, 12: 2397793, 8857: 2425975, 8859: 2434973, 8861: 2435157, 8868: 2435351}
[2025-07-27 20:54:12] 2025-07-28 00:53:40,103 | INFO     | --------------------------------------------------
[2025-07-27 20:54:12] 2025-07-28 00:53:40,103 | INFO     | 
[2025-07-27 20:54:12] 2025-07-28 00:53:40,104 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 20:54:12] 2025-07-28 00:53:40,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,133 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,134 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:54:12] 2025-07-28 00:53:40,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:54:12] 2025-07-28 00:53:40,137 | INFO     | job 6747548459 has completed (purged errors)
[2025-07-27 20:54:12] 2025-07-28 00:53:40,137 | INFO     | overall cleanup function is called
[2025-07-27 20:54:12] 2025-07-28 00:53:41,145 | INFO     | --- collectZombieJob: --- 10, [3292]
[2025-07-27 20:54:12] 2025-07-28 00:53:41,146 | INFO     | zombie collector waiting for pid 3292
[2025-07-27 20:54:12] 2025-07-28 00:53:41,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:54:12] 2025-07-28 00:53:41,146 | INFO     | collected zombie processes
[2025-07-27 20:54:12] 2025-07-28 00:53:41,146 | INFO     | will attempt to kill all subprocesses of pid=3292
[2025-07-27 20:54:12] 2025-07-28 00:53:41,239 | INFO     | process IDs to be killed: [3292] (in reverse order)
[2025-07-27 20:54:12] 2025-07-28 00:53:41,320 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:54:12] 2025-07-28 00:53:41,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:54:12] 2025-07-28 00:53:41,325 | INFO     | did not find any defunct processes belonging to 3292
[2025-07-27 20:54:12] 2025-07-28 00:53:41,327 | INFO     | did not find any defunct processes belonging to 3292
[2025-07-27 20:54:12] 2025-07-28 00:53:41,327 | INFO     | ready for new job
[2025-07-27 20:54:12] 2025-07-28 00:53:41,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:54:12] 2025-07-28 00:53:41,329 | INFO     | ***************************************
[2025-07-27 20:54:12] 2025-07-28 00:53:41,329 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:54:12] 2025-07-28 00:53:41,329 | INFO     | ***************************************
[2025-07-27 20:54:12] 2025-07-28 00:53:41,330 | INFO     | 
[2025-07-27 20:54:12] 2025-07-28 00:53:41,330 | INFO     | architecture information:
[2025-07-27 20:54:12] 2025-07-28 00:53:41,331 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:54:12] 2025-07-28 00:53:41,350 | INFO     | cat /etc/os-release:
[2025-07-27 20:54:12] NAME="CentOS Linux"
[2025-07-27 20:54:12] VERSION="7 (Core)"
[2025-07-27 20:54:12] ID="centos"
[2025-07-27 20:54:12] ID_LIKE="rhel fedora"
[2025-07-27 20:54:12] VERSION_ID="7"
[2025-07-27 20:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:54:12] ANSI_COLOR="0;31"
[2025-07-27 20:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:54:12] HOME_URL="https://www.centos.org/"
[2025-07-27 20:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:54:12] 
[2025-07-27 20:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:54:12] 
[2025-07-27 20:54:12] 2025-07-28 00:53:41,350 | INFO     | ***************************************
[2025-07-27 20:54:12] 2025-07-28 00:53:41,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 20:54:12] 2025-07-28 00:53:41,874 | INFO     | sufficient remaining disk space (18735955968 B)
[2025-07-27 20:54:12] 2025-07-28 00:53:41,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:54:12] 2025-07-28 00:53:41,875 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:54:12] 2025-07-28 00:53:41,875 | INFO     | update_server=False
[2025-07-27 20:54:12] 2025-07-28 00:53:41,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:54:12] 2025-07-28 00:53:41,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:54:12] 2025-07-28 00:53:41,876 | INFO     | aborting loop
[2025-07-27 20:54:12] 2025-07-28 00:53:41,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:54:12] 2025-07-28 00:53:41,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:54:12] 2025-07-28 00:53:42,181 | INFO     | all data control threads have been joined
[2025-07-27 20:54:12] 2025-07-28 00:53:42,589 | INFO     | all payload control threads have been joined
[2025-07-27 20:54:12] 2025-07-28 00:53:42,881 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:42,882 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:42,882 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:42,950 | INFO     | [job] validate thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,088 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,185 | INFO     | [data] control thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,214 | INFO     | all job control threads have been joined
[2025-07-27 20:54:12] 2025-07-28 00:53:43,221 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,358 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,554 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,569 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,594 | INFO     | [payload] control thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:54:12] 2025-07-28 00:53:43,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:43,883 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:44,094 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:44,219 | INFO     | [job] control thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:47,689 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:54:12] 2025-07-28 00:53:49,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762084304704)>', '<ExcThread(monitor, started 139761490573056)>']
[2025-07-27 20:54:12] 2025-07-28 00:53:54,560 | INFO     | all workflow threads have been joined
[2025-07-27 20:54:12] 2025-07-28 00:53:54,566 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:54:12] 2025-07-28 00:53:54,566 | INFO     | traces error code: 0
[2025-07-27 20:54:12] 2025-07-28 00:53:54,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:54:12] 2025-07-28 00:54:11,899 | INFO     | PID=29082 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:54:12] 2025-07-28 00:54:11,899 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:54:12] 2025-07-28 00:54:11,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:54:12] 2025-07-28 00:54:11,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:54:12] 2025-07-28 00:54:11,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:54:12] 2025-07-28 00:54:11,900 | INFO     | [monitor] control thread has ended
[2025-07-27 20:54:12] 2025-07-28 00:54:12,022 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:54:12] 2025-07-28 00:54:12,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:54:12] 2025-07-28 00:54:12,032 [wrapper] pilotpid: 29082
[2025-07-27 20:54:12] 2025-07-28 00:54:12,037 [wrapper] Pilot exit status: 0
[2025-07-27 20:54:12] 2025-07-28 00:54:12,056 [wrapper] pandaids: 6747548459
[2025-07-27 20:54:12] 2025-07-28 00:54:12,103 [wrapper] cleanup supervisor_pilot  8872 29083
[2025-07-27 20:54:12] 2025-07-28 00:54:12,108 [wrapper] Test setup, not cleaning
[2025-07-27 20:54:12] 2025-07-28 00:54:12,114 [wrapper] apfmon messages muted
[2025-07-27 20:54:12] 2025-07-28 00:54:12,119 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:54:12] 2025-07-28 00:54:12,124 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:54:12]  *** Error codes and diagnostics ***
[2025-07-27 20:54:12]     "exeErrorCode": 0,
[2025-07-27 20:54:12]     "exeErrorDiag": "",
[2025-07-27 20:54:12]     "pilotErrorCode": 0,
[2025-07-27 20:54:12]     "pilotErrorDiag": "",
[2025-07-27 20:54:12]  *** Listing of results directory ***
[2025-07-27 20:54:12] total 358260
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 12:59 queuedata.json
[2025-07-27 20:54:12] -rwx------ 1 boincer umatlas     36292 Jul 27 12:59 runpilot2-wrapper.sh
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas       100 Jul 27 18:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:54:12] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 18:25 run_atlas
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas       105 Jul 27 18:25 job.xml
[2025-07-27 20:54:12] -rw-r--r-- 2 boincer umatlas 146306341 Jul 27 18:25 EVNT.45743347._002809.pool.root.1
[2025-07-27 20:54:12] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:25 start_atlas.sh
[2025-07-27 20:54:12] drwxrwx--x 2 boincer umatlas      4096 Jul 27 18:25 shared
[2025-07-27 20:54:12] -rw-r--r-- 2 boincer umatlas    542898 Jul 27 18:25 input.tar.gz
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas         0 Jul 27 18:25 boinc_lockfile
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 18:25 pandaJob.out
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas    980109 Jul 27 18:25 agis_schedconf.cvmfs.json
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas   1593052 Jul 27 18:25 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:54:12] drwx------ 4 boincer umatlas      4096 Jul 27 18:25 pilot3
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas      5825 Jul 27 20:45 init_data.xml
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas 214400806 Jul 27 20:52 HITS.45743349._052528.pool.root.1
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas       529 Jul 27 20:53 boinc_task_state.xml
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas      1062 Jul 27 20:53 memory_monitor_summary.json
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas    338500 Jul 27 20:53 log.45743349._052528.job.log.tgz.1
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas        95 Jul 27 20:53 pilot_heartbeat.json
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas      7848 Jul 27 20:53 heartbeat.json
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas        27 Jul 27 20:53 wrapper_checkpoint.txt
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 20:53 boinc_mmap_file
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas       745 Jul 27 20:54 pilotlog.txt
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas    802102 Jul 27 20:54 log.45743349._052528.job.log.1
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas       357 Jul 27 20:54 output.list
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas       620 Jul 27 20:54 runtime_log
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas   1157120 Jul 27 20:54 result.tar.gz
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 20:54 runtime_log.err
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas       660 Jul 27 20:54 pQTKDmRtJ07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9tVLDmBBSz4m.diag
[2025-07-27 20:54:12] -rw-r--r-- 1 boincer umatlas     21243 Jul 27 20:54 stderr.txt
[2025-07-27 20:54:12] HITS file was successfully produced:
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas 214400806 Jul 27 20:52 shared/HITS.pool.root.1
[2025-07-27 20:54:12]  *** Contents of shared directory: ***
[2025-07-27 20:54:12] total 353940
[2025-07-27 20:54:12] -rw-r--r-- 2 boincer umatlas 146306341 Jul 27 18:25 ATLAS.root_0
[2025-07-27 20:54:12] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:25 start_atlas.sh
[2025-07-27 20:54:12] -rw-r--r-- 2 boincer umatlas    542898 Jul 27 18:25 input.tar.gz
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas 214400806 Jul 27 20:52 HITS.pool.root.1
[2025-07-27 20:54:12] -rw------- 1 boincer umatlas   1157120 Jul 27 20:54 result.tar.gz
20:54:14 (24658): run_atlas exited; CPU time 66700.910887
20:54:14 (24658): called boinc_finish(0)

</stderr_txt>
]]>

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