Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:01 (3094144): wrapper (7.7.26015): starting
18:22:01 (3094144): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:22:01] Arguments: --nthreads 8
[2025-07-27 18:22:01] Threads: 8
[2025-07-27 18:22:01] Checking for CVMFS
[2025-07-27 18:22:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:22:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:22:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:22:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:22:02] 2.13.1.0 672044 14751 163448 148827 1 188 24570661 40960001 10408 16776704 0 47027226 99.886 26273163 43593 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:22:02] CVMFS is ok
[2025-07-27 18:22:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:22:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:22:02] Further information can be found at the LHC@home message board.
[2025-07-27 18:22:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:22:02] Checking for apptainer binary...
[2025-07-27 18:22:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:22:02] Running /usr/bin/apptainer --version
[2025-07-27 18:22:02] apptainer version 1.4.1-1.el9
[2025-07-27 18:22:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:22:02] c-212-3.aglt2.org
[2025-07-27 18:22:02] apptainer works
[2025-07-27 18:22:02] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:22:02] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:22:02] Starting ATLAS job with PandaID=6747627362
[2025-07-27 18:22:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:47:13]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:47:13]  mtime=0
[2025-07-27 19:47:13]  protocol_id=None
[2025-07-27 19:47:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 19:47:13]  replicas=None
[2025-07-27 19:47:13]  scope=mc23_13p6TeV
[2025-07-27 19:47:13]  status=None
[2025-07-27 19:47:13]  status_code=0
[2025-07-27 19:47:13]  storage_token=
[2025-07-27 19:47:13]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6747627362/log.45743349._054912.job.log.tgz.1
[2025-07-27 19:47:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/d1/log.45743349._054912.job.log.tgz.1
[2025-07-27 19:47:13]  workdir=None
[2025-07-27 19:47:13] ]
[2025-07-27 19:47:13] 2025-07-27 23:46:46,839 | INFO     | transferring file log.45743349._054912.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6747627362/log.45743349._054912.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:47:13] 2025-07-27 23:46:46,839 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6747627362/log.45743349._054912.job.log.tgz.1 /tmp/boinchome/slots/5/log.45743349._054912.job
[2025-07-27 19:47:13] 2025-07-27 23:46:46,862 | INFO     | adding to output.list: log.45743349._054912.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/d1/log.45743349._054912.job.log.tg
[2025-07-27 19:47:13] 2025-07-27 23:46:46,862 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:47:13] 2025-07-27 23:46:46,863 | INFO     | summary of transferred files:
[2025-07-27 19:47:13] 2025-07-27 23:46:46,863 | INFO     |  -- lfn=log.45743349._054912.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:47:13] 2025-07-27 23:46:46,863 | INFO     | stage-out finished correctly
[2025-07-27 19:47:13] 2025-07-27 23:46:47,362 | INFO     | monitor loop #372: job 0:6747627362 is in state 'finished'
[2025-07-27 19:47:13] 2025-07-27 23:46:47,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:47:13] 2025-07-27 23:46:47,872 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:47:13] 2025-07-27 23:46:48,882 | INFO     | job 6747627362 has state=finished
[2025-07-27 19:47:13] 2025-07-27 23:46:48,883 | INFO     | preparing for final server update for job 6747627362 in state='finished'
[2025-07-27 19:47:13] 2025-07-27 23:46:48,883 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:47:13] 2025-07-27 23:46:48,883 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:47:13] 2025-07-27 23:46:48,884 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:47:13] 2025-07-27 23:46:48,884 | INFO     | job 6747627362 has finished - writing final server update
[2025-07-27 19:47:13] 2025-07-27 23:46:48,884 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:47:13] 2025-07-27 23:46:48,886 | INFO     | executing command: lscpu
[2025-07-27 19:47:13] 2025-07-27 23:46:48,955 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:47:13] 2025-07-27 23:46:49,867 | INFO     | monitor loop #373: job 0:6747627362 is in state 'finished'
[2025-07-27 19:47:13] 2025-07-27 23:46:49,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:47:13] 2025-07-27 23:46:52,372 | INFO     | monitor loop #374: job 0:6747627362 is in state 'finished'
[2025-07-27 19:47:13] 2025-07-27 23:46:52,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:47:13] 2025-07-27 23:46:53,932 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:47:13] 2025-07-27 23:46:53,939 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3282.0362812500007
[2025-07-27 19:47:13] 2025-07-27 23:46:53,954 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6747627362/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:47:13] 2025-07-27 23:46:53,955 | INFO     | extracted standard info from prmon json
[2025-07-27 19:47:13] 2025-07-27 23:46:53,955 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:47:13] 2025-07-27 23:46:53,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:47:13] 2025-07-27 23:46:53,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:47:13] 2025-07-27 23:46:53,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:47:13] 2025-07-27 23:46:53,958 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:47:13] 2025-07-27 23:46:53,958 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 19:47:13] 2025-07-27 23:46:53,958 | INFO     | sum of deviations: -4581864940.0
[2025-07-27 19:47:13] 2025-07-27 23:46:53,958 | INFO     | mean x: 1753657563.5
[2025-07-27 19:47:13] 2025-07-27 23:46:53,958 | INFO     | mean y: 2561311.5263157897
[2025-07-27 19:47:13] 2025-07-27 23:46:53,958 | INFO     | -- intersect: 59042115734.70631
[2025-07-27 19:47:13] 2025-07-27 23:46:53,959 | INFO     | intersect: 59042115734.70631
[2025-07-27 19:47:13] 2025-07-27 23:46:53,959 | INFO     | chi2: 0.005457942146172468
[2025-07-27 19:47:13] 2025-07-27 23:46:53,959 | INFO     | -- intersect: 59042115734.70631
[2025-07-27 19:47:13] 2025-07-27 23:46:53,959 | INFO     | current memory leak: -33.67 B/s (using 76 data points, chi2=0.01)
[2025-07-27 19:47:13] 2025-07-27 23:46:53,959 | INFO     | could have reported an average CPU frequency of 3274 MHz (6 samples)
[2025-07-27 19:47:13] 2025-07-27 23:46:53,959 | INFO     | ..............................
[2025-07-27 19:47:13] 2025-07-27 23:46:53,959 | INFO     | . Timing measurements:
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | . get job = 0 s
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | . initial setup = 2 s
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | . payload setup = 9 s
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | . stage-in = 0 s
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | . payload execution = 5039 s
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | . stage-out = 0 s
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | . log creation = 0 s
[2025-07-27 19:47:13] 2025-07-27 23:46:53,960 | INFO     | ..............................
[2025-07-27 19:47:13] 2025-07-27 23:46:54,107 | INFO     | 
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | job summary report
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | --------------------------------------------------
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | PanDA job id: 6747627362
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | task id: 45743349
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | errors: (none)
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | pilot state: finished 
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | transexitcode: 0
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | exeerrorcode: 0
[2025-07-27 19:47:13] 2025-07-27 23:46:54,108 | INFO     | exeerrordiag: 
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | exitcode: 0
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | exitmsg: OK
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | cpuconsumptiontime: 36092 s
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | nevents: 400
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | neventsw: 0
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | pid: 3104429
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | pgrp: 3104429
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | corecount: 8
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | event service: False
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 5052: 2423990, 5053: 2423989, 5054: 2433171, 5055: 2433227, 5061: 2433421}
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | --------------------------------------------------
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | 
[2025-07-27 19:47:13] 2025-07-27 23:46:54,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-27 19:47:13] 2025-07-27 23:46:54,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,130 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,130 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:47:13] 2025-07-27 23:46:54,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:47:13] 2025-07-27 23:46:54,132 | INFO     | job 6747627362 has completed (purged errors)
[2025-07-27 19:47:13] 2025-07-27 23:46:54,132 | INFO     | overall cleanup function is called
[2025-07-27 19:47:13] 2025-07-27 23:46:55,140 | INFO     | --- collectZombieJob: --- 10, [3104429]
[2025-07-27 19:47:13] 2025-07-27 23:46:55,140 | INFO     | zombie collector waiting for pid 3104429
[2025-07-27 19:47:13] 2025-07-27 23:46:55,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:47:13] 2025-07-27 23:46:55,141 | INFO     | collected zombie processes
[2025-07-27 19:47:13] 2025-07-27 23:46:55,141 | INFO     | will attempt to kill all subprocesses of pid=3104429
[2025-07-27 19:47:13] 2025-07-27 23:46:55,344 | INFO     | PID=3097969 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 19:47:13] 2025-07-27 23:46:55,344 | INFO     | .. there are 14 such processes running
[2025-07-27 19:47:13] 2025-07-27 23:46:55,617 | INFO     | process IDs to be killed: [3104429] (in reverse order)
[2025-07-27 19:47:13] 2025-07-27 23:46:55,734 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:47:13] 2025-07-27 23:46:55,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:47:13] 2025-07-27 23:46:55,749 | INFO     | did not find any defunct processes belonging to 3104429
[2025-07-27 19:47:13] 2025-07-27 23:46:55,760 | INFO     | did not find any defunct processes belonging to 3104429
[2025-07-27 19:47:13] 2025-07-27 23:46:55,760 | INFO     | ready for new job
[2025-07-27 19:47:13] 2025-07-27 23:46:55,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:47:13] 2025-07-27 23:46:55,762 | INFO     | ***************************************
[2025-07-27 19:47:13] 2025-07-27 23:46:55,762 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:47:13] 2025-07-27 23:46:55,762 | INFO     | ***************************************
[2025-07-27 19:47:13] 2025-07-27 23:46:55,762 | INFO     | 
[2025-07-27 19:47:13] 2025-07-27 23:46:55,767 | INFO     | architecture information:
[2025-07-27 19:47:13] 2025-07-27 23:46:55,767 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:47:13] 2025-07-27 23:46:55,785 | INFO     | cat /etc/os-release:
[2025-07-27 19:47:13] NAME="CentOS Linux"
[2025-07-27 19:47:13] VERSION="7 (Core)"
[2025-07-27 19:47:13] ID="centos"
[2025-07-27 19:47:13] ID_LIKE="rhel fedora"
[2025-07-27 19:47:13] VERSION_ID="7"
[2025-07-27 19:47:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:47:13] ANSI_COLOR="0;31"
[2025-07-27 19:47:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:47:13] HOME_URL="https://www.centos.org/"
[2025-07-27 19:47:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:47:13] 
[2025-07-27 19:47:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:47:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:47:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:47:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:47:13] 
[2025-07-27 19:47:13] 2025-07-27 23:46:55,785 | INFO     | ***************************************
[2025-07-27 19:47:13] 2025-07-27 23:46:56,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-27 19:47:13] 2025-07-27 23:46:56,311 | INFO     | sufficient remaining disk space (124582363136 B)
[2025-07-27 19:47:13] 2025-07-27 23:46:56,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:47:13] 2025-07-27 23:46:56,312 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:47:13] 2025-07-27 23:46:56,312 | INFO     | update_server=False
[2025-07-27 19:47:13] 2025-07-27 23:46:56,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:47:13] 2025-07-27 23:46:56,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:47:13] 2025-07-27 23:46:56,313 | INFO     | aborting loop
[2025-07-27 19:47:13] 2025-07-27 23:46:56,313 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 19:47:13] 2025-07-27 23:46:56,314 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:47:13] 2025-07-27 23:46:56,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:47:13] 2025-07-27 23:46:56,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:47:13] 2025-07-27 23:46:56,441 | INFO     | all data control threads have been joined
[2025-07-27 19:47:13] 2025-07-27 23:46:56,645 | INFO     | all payload control threads have been joined
[2025-07-27 19:47:13] 2025-07-27 23:46:57,008 | INFO     | all job control threads have been joined
[2025-07-27 19:47:13] 2025-07-27 23:46:57,319 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:57,319 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:57,414 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:57,448 | INFO     | [data] control thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:57,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:47:13] 2025-07-27 23:46:57,650 | INFO     | [payload] control thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:57,891 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:57,984 | INFO     | [job] validate thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:58,010 | INFO     | [job] control thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:58,225 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:58,260 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:58,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:47:13] 2025-07-27 23:46:58,668 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:58,688 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:46:59,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:47:13] 2025-07-27 23:46:59,474 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:47:00,056 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:47:02,469 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:47:06,542 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:47:13] 2025-07-27 23:47:07,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:47:13] 2025-07-27 23:47:07,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140297210394432)>', '<ExcThread(monitor, started 140296440506112)>']
[2025-07-27 19:47:13] 2025-07-27 23:47:08,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:47:13] 2025-07-27 23:47:08,365 | INFO     | [monitor] control thread has ended
[2025-07-27 19:47:13] 2025-07-27 23:47:13,015 | INFO     | all workflow threads have been joined
[2025-07-27 19:47:13] 2025-07-27 23:47:13,015 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:47:13] 2025-07-27 23:47:13,015 | INFO     | traces error code: 0
[2025-07-27 19:47:13] 2025-07-27 23:47:13,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:47:13] 2025-07-27 23:47:13,126 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:47:13] 2025-07-27 23:47:13,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:47:13] 2025-07-27 23:47:13,137 [wrapper] pilotpid: 3097969
[2025-07-27 19:47:13] 2025-07-27 23:47:13,141 [wrapper] Pilot exit status: 0
[2025-07-27 19:47:13] 2025-07-27 23:47:13,161 [wrapper] pandaids: 6747627362
[2025-07-27 19:47:13] 2025-07-27 23:47:13,244 [wrapper] cleanup supervisor_pilot 3391116 3097970
[2025-07-27 19:47:13] 2025-07-27 23:47:13,248 [wrapper] Test setup, not cleaning
[2025-07-27 19:47:13] 2025-07-27 23:47:13,253 [wrapper] apfmon messages muted
[2025-07-27 19:47:13] 2025-07-27 23:47:13,255 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:47:13] 2025-07-27 23:47:13,259 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:47:13]  *** Error codes and diagnostics ***
[2025-07-27 19:47:13]     "exeErrorCode": 0,
[2025-07-27 19:47:13]     "exeErrorDiag": "",
[2025-07-27 19:47:13]     "pilotErrorCode": 0,
[2025-07-27 19:47:13]     "pilotErrorDiag": "",
[2025-07-27 19:47:13]  *** Listing of results directory ***
[2025-07-27 19:47:13] total 346872
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 15:51 pilot3.tar.gz
[2025-07-27 19:47:13] -rwx------. 1 boincer umatlas     36292 Jul 27 15:52 runpilot2-wrapper.sh
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 15:52 queuedata.json
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:47:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:22 run_atlas
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:22 job.xml
[2025-07-27 19:47:13] -rw-r--r--. 2 boincer umatlas 142571978 Jul 27 18:22 EVNT.45743347._002980.pool.root.1
[2025-07-27 19:47:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:22 start_atlas.sh
[2025-07-27 19:47:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:22 shared
[2025-07-27 19:47:13] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 18:22 input.tar.gz
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:22 boinc_lockfile
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas      2563 Jul 27 18:22 pandaJob.out
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas    980109 Jul 27 18:22 agis_schedconf.cvmfs.json
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:22 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:47:13] drwx------. 4 boincer umatlas      4096 Jul 27 18:22 pilot3
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas        95 Jul 27 19:46 pilot_heartbeat.json
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas 207144895 Jul 27 19:46 HITS.45743349._054912.pool.root.1
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:46 boinc_task_state.xml
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas      1027 Jul 27 19:46 memory_monitor_summary.json
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas    307077 Jul 27 19:46 log.45743349._054912.job.log.tgz.1
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas      7766 Jul 27 19:46 heartbeat.json
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 19:46 init_data.xml
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:47 wrapper_checkpoint.txt
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:47 boinc_mmap_file
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas      4553 Jul 27 19:47 pilotlog.txt
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas    493866 Jul 27 19:47 log.45743349._054912.job.log.1
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas       357 Jul 27 19:47 output.list
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:47 runtime_log
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas    819200 Jul 27 19:47 result.tar.gz
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 19:47 runtime_log.err
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas       651 Jul 27 19:47 4VDNDm3aM07n9Rq4apOajLDm4fhM0noT9bVof3QYDmk22KDmj5P5Ko.diag
[2025-07-27 19:47:13] -rw-r--r--. 1 boincer umatlas     21765 Jul 27 19:47 stderr.txt
[2025-07-27 19:47:13] HITS file was successfully produced:
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas 207144895 Jul 27 19:46 shared/HITS.pool.root.1
[2025-07-27 19:47:13]  *** Contents of shared directory: ***
[2025-07-27 19:47:13] total 342880
[2025-07-27 19:47:13] -rw-r--r--. 2 boincer umatlas 142571978 Jul 27 18:22 ATLAS.root_0
[2025-07-27 19:47:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:22 start_atlas.sh
[2025-07-27 19:47:13] -rw-r--r--. 2 boincer umatlas    542897 Jul 27 18:22 input.tar.gz
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas 207144895 Jul 27 19:46 HITS.pool.root.1
[2025-07-27 19:47:13] -rw-------. 1 boincer umatlas    819200 Jul 27 19:47 result.tar.gz
19:47:14 (3094144): run_atlas exited; CPU time 36205.257563
19:47:14 (3094144): called boinc_finish(0)

</stderr_txt>
]]>

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