Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:14 (114803): wrapper (7.7.26015): starting
12:43:14 (114803): wrapper: running run_atlas (--nthreads 2)
[2025-07-28 12:43:14] Arguments: --nthreads 2
[2025-07-28 12:43:14] Threads: 2
[2025-07-28 12:43:14] Checking for CVMFS
[2025-07-28 12:43:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 12:43:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 12:43:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 12:43:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 12:43:15] 2.9.2.0 2667837 9319 57916 148845 2 57 25259400 36864000 0 130560 0 4131027 99.984 337817 2209 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-28 12:43:15] CVMFS is ok
[2025-07-28 12:43:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 12:43:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 12:43:15] Further information can be found at the LHC@home message board.
[2025-07-28 12:43:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 12:43:15] Checking for apptainer binary...
[2025-07-28 12:43:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-28 12:43:15] Running /usr/bin/apptainer --version
[2025-07-28 12:43:15] apptainer version 1.4.1-1.1
[2025-07-28 12:43:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 12:43:15] timemachine
[2025-07-28 12:43:15] apptainer works
[2025-07-28 12:43:15] Set ATHENA_PROC_NUMBER=2
[2025-07-28 12:43:15] Set ATHENA_CORE_NUMBER=2
[2025-07-28 12:43:15] Starting ATLAS job with PandaID=6747548918
[2025-07-28 12:43:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 15:49:58]  *** The last 200 lines of the pilot log: ***
[2025-07-28 15:49:58] 2025-07-28 13:49:22,533 | INFO     | executing command: lscpu
[2025-07-28 15:49:58] 2025-07-28 13:49:22,553 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 15:49:58] 2025-07-28 13:49:23,887 | INFO     | monitor loop #852: job 0:6747548918 is in state 'finished'
[2025-07-28 15:49:58] 2025-07-28 13:49:23,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,363 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 15:49:58] 2025-07-28 13:49:25,364 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3774.8627500000002
[2025-07-28 15:49:58] 2025-07-28 13:49:25,365 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6747548918/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,366 | INFO     | extracted standard info from prmon json
[2025-07-28 15:49:58] 2025-07-28 13:49:25,366 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 15:49:58] 2025-07-28 13:49:25,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 15:49:58] 2025-07-28 13:49:25,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 15:49:58] 2025-07-28 13:49:25,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 15:49:58] 2025-07-28 13:49:25,367 | INFO     | fitting pss+swap vs Time
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | sum of square deviations: 1900284932.0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | sum of deviations: -21136630356.999977
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | mean x: 1753704984.0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | mean y: 2346442.2131147543
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | -- intersect: 19508586468.556995
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | intersect: 19508586468.556995
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | chi2: 1.7059482008194922
[2025-07-28 15:49:58] 2025-07-28 13:49:25,368 | INFO     | sum of square deviations: 1748737904.5
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | sum of deviations: -20651287425.500004
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | mean x: 1753704831.5
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | mean y: 2346940.2191011235
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | -- intersect: 20712290060.683186
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | intersect: 20712290060.683186
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | chi2: 1.6998341637130427
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | current chi2=1.6998341637130427 (change=0.35839523752904107 %)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | right removable region: 177
[2025-07-28 15:49:58] 2025-07-28 13:49:25,369 | INFO     | sum of square deviations: 1748737904.5
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | sum of deviations: -45712688526.49999
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | mean x: 1753705136.5
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | mean y: 2370807.320224719
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | -- intersect: 45844904708.97366
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | intersect: 45844904708.97366
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | chi2: 0.2001893191612485
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | current chi2=0.2001893191612485 (change=88.26521701742861 %)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,370 | INFO     | sum of square deviations: 1605470102.0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | sum of deviations: -38375229686.0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | mean x: 1753705289.0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | mean y: 2362985.3352601156
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | -- intersect: 41920828600.54109
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | intersect: 41920828600.54109
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | chi2: 0.1835114500560406
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | current chi2=0.1835114500560406 (change=8.3310484171107 %)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | left removable region: 20
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | sum of square deviations: 1199940638.0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | sum of deviations: -25463882272.999996
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | mean x: 1753705411.0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | mean y: 2349710.3694267515
[2025-07-28 15:49:58] 2025-07-28 13:49:25,371 | INFO     | -- intersect: 37217647461.81293
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | intersect: 37217647461.81293
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | chi2: 0.14674345443858455
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | -- intersect: 37217647461.81293
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | current memory leak: -21.22 B/s (using 157 data points, chi2=0.15)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | could have reported an average CPU frequency of 3706 MHz (10 samples)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | ..............................
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . Timing measurements:
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . get job = 0 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . initial setup = 2 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . payload setup = 9 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . stage-in = 0 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . payload execution = 11130 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . stage-out = 1 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | . log creation = 0 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,372 | INFO     | ..............................
[2025-07-28 15:49:58] 2025-07-28 13:49:25,901 | INFO     | 
[2025-07-28 15:49:58] 2025-07-28 13:49:25,902 | INFO     | job summary report
[2025-07-28 15:49:58] 2025-07-28 13:49:25,902 | INFO     | --------------------------------------------------
[2025-07-28 15:49:58] 2025-07-28 13:49:25,902 | INFO     | PanDA job id: 6747548918
[2025-07-28 15:49:58] 2025-07-28 13:49:25,902 | INFO     | task id: 45743349
[2025-07-28 15:49:58] 2025-07-28 13:49:25,902 | INFO     | errors: (none)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 15:49:58] 2025-07-28 13:49:25,903 | INFO     | pilot state: finished 
[2025-07-28 15:49:58] 2025-07-28 13:49:25,903 | INFO     | transexitcode: 0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,903 | INFO     | exeerrorcode: 0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,903 | INFO     | exeerrordiag: 
[2025-07-28 15:49:58] 2025-07-28 13:49:25,903 | INFO     | exitcode: 0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,903 | INFO     | exitmsg: OK
[2025-07-28 15:49:58] 2025-07-28 13:49:25,903 | INFO     | cpuconsumptiontime: 21780 s
[2025-07-28 15:49:58] 2025-07-28 13:49:25,904 | INFO     | nevents: 400
[2025-07-28 15:49:58] 2025-07-28 13:49:25,904 | INFO     | neventsw: 0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,904 | INFO     | pid: 124900
[2025-07-28 15:49:58] 2025-07-28 13:49:25,904 | INFO     | pgrp: 124900
[2025-07-28 15:49:58] 2025-07-28 13:49:25,904 | INFO     | corecount: 2
[2025-07-28 15:49:58] 2025-07-28 13:49:25,904 | INFO     | event service: False
[2025-07-28 15:49:58] 2025-07-28 13:49:25,904 | INFO     | sizes: {0: 2397427, 3: 2397689, 11: 2397717, 11140: 2427045, 11142: 2436133, 11146: 2436271}
[2025-07-28 15:49:58] 2025-07-28 13:49:25,905 | INFO     | --------------------------------------------------
[2025-07-28 15:49:58] 2025-07-28 13:49:25,905 | INFO     | 
[2025-07-28 15:49:58] 2025-07-28 13:49:25,905 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-28 15:49:58] 2025-07-28 13:49:25,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 15:49:58] 2025-07-28 13:49:25,926 | INFO     | job 6747548918 has completed (purged errors)
[2025-07-28 15:49:58] 2025-07-28 13:49:25,927 | INFO     | overall cleanup function is called
[2025-07-28 15:49:58] 2025-07-28 13:49:26,934 | INFO     | --- collectZombieJob: --- 10, [124900]
[2025-07-28 15:49:58] 2025-07-28 13:49:26,934 | INFO     | zombie collector waiting for pid 124900
[2025-07-28 15:49:58] 2025-07-28 13:49:26,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 15:49:58] 2025-07-28 13:49:26,935 | INFO     | collected zombie processes
[2025-07-28 15:49:58] 2025-07-28 13:49:26,935 | INFO     | will attempt to kill all subprocesses of pid=124900
[2025-07-28 15:49:58] 2025-07-28 13:49:26,983 | INFO     | process IDs to be killed: [124900] (in reverse order)
[2025-07-28 15:49:58] 2025-07-28 13:49:27,008 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 15:49:58] 2025-07-28 13:49:27,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 15:49:58] 2025-07-28 13:49:27,009 | INFO     | did not find any defunct processes belonging to 124900
[2025-07-28 15:49:58] 2025-07-28 13:49:27,010 | INFO     | did not find any defunct processes belonging to 124900
[2025-07-28 15:49:58] 2025-07-28 13:49:27,010 | INFO     | ready for new job
[2025-07-28 15:49:58] 2025-07-28 13:49:27,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 15:49:58] 2025-07-28 13:49:27,011 | INFO     | ***************************************
[2025-07-28 15:49:58] 2025-07-28 13:49:27,011 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 15:49:58] 2025-07-28 13:49:27,011 | INFO     | ***************************************
[2025-07-28 15:49:58] 2025-07-28 13:49:27,011 | INFO     | 
[2025-07-28 15:49:58] 2025-07-28 13:49:27,012 | INFO     | architecture information:
[2025-07-28 15:49:58] 2025-07-28 13:49:27,012 | INFO     | executing command: cat /etc/os-release
[2025-07-28 15:49:58] 2025-07-28 13:49:27,022 | INFO     | cat /etc/os-release:
[2025-07-28 15:49:58] NAME="CentOS Linux"
[2025-07-28 15:49:58] VERSION="7 (Core)"
[2025-07-28 15:49:58] ID="centos"
[2025-07-28 15:49:58] ID_LIKE="rhel fedora"
[2025-07-28 15:49:58] VERSION_ID="7"
[2025-07-28 15:49:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 15:49:58] ANSI_COLOR="0;31"
[2025-07-28 15:49:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 15:49:58] HOME_URL="https://www.centos.org/"
[2025-07-28 15:49:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 15:49:58] 
[2025-07-28 15:49:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 15:49:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 15:49:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 15:49:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 15:49:58] 
[2025-07-28 15:49:58] 2025-07-28 13:49:27,023 | INFO     | ***************************************
[2025-07-28 15:49:58] 2025-07-28 13:49:27,526 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-28 15:49:58] 2025-07-28 13:49:27,543 | INFO     | sufficient remaining disk space (6663295729664 B)
[2025-07-28 15:49:58] 2025-07-28 13:49:27,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 15:49:58] 2025-07-28 13:49:27,544 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 15:49:58] 2025-07-28 13:49:27,544 | INFO     | update_server=False
[2025-07-28 15:49:58] 2025-07-28 13:49:27,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 15:49:58] 2025-07-28 13:49:27,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 15:49:58] 2025-07-28 13:49:27,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 15:49:58] 2025-07-28 13:49:27,545 | INFO     | aborting loop
[2025-07-28 15:49:58] 2025-07-28 13:49:27,668 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 15:49:58] 2025-07-28 13:49:27,920 | INFO     | all data control threads have been joined
[2025-07-28 15:49:58] 2025-07-28 13:49:28,225 | INFO     | all payload control threads have been joined
[2025-07-28 15:49:58] 2025-07-28 13:49:28,550 | INFO     | [job] retrieve thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:28,551 | INFO     | [job] job monitor thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:28,926 | INFO     | [data] control thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:29,051 | INFO     | [payload] validate_post thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:29,228 | INFO     | all job control threads have been joined
[2025-07-28 15:49:58] 2025-07-28 13:49:29,231 | INFO     | [payload] control thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:29,551 | INFO     | [data] copytool_out thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:29,779 | INFO     | job.realtimelogging is not enabled
[2025-07-28 15:49:58] 2025-07-28 13:49:29,807 | INFO     | [payload] failed_post thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:29,895 | INFO     | [job] validate thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:29,974 | INFO     | [data] copytool_in thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:30,011 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:30,043 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:30,043 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:30,234 | INFO     | [job] control thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:30,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 15:49:58] 2025-07-28 13:49:30,785 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:31,427 | INFO     | [job] queue monitor thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:31,675 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 15:49:58] 2025-07-28 13:49:32,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431794423616)>', '<ExcThread(monitor, started 140431438362368)>']
[2025-07-28 15:49:58] 2025-07-28 13:49:37,475 | INFO     | all workflow threads have been joined
[2025-07-28 15:49:58] 2025-07-28 13:49:37,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 15:49:58] 2025-07-28 13:49:37,475 | INFO     | traces error code: 0
[2025-07-28 15:49:58] 2025-07-28 13:49:37,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 15:49:58] 2025-07-28 13:49:58,442 | INFO     | PID=118433 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 15:49:58] 2025-07-28 13:49:58,443 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 15:49:58] 2025-07-28 13:49:58,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 15:49:58] 2025-07-28 13:49:58,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 15:49:58] 2025-07-28 13:49:58,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 15:49:58] 2025-07-28 13:49:58,443 | INFO     | [monitor] control thread has ended
[2025-07-28 15:49:58] 2025-07-28 13:49:58,520 [wrapper] ==== pilot stdout END ====
[2025-07-28 15:49:58] 2025-07-28 13:49:58,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 15:49:58] 2025-07-28 13:49:58,527 [wrapper] pilotpid: 118433
[2025-07-28 15:49:58] 2025-07-28 13:49:58,530 [wrapper] Pilot exit status: 0
[2025-07-28 15:49:58] 2025-07-28 13:49:58,560 [wrapper] pandaids: 6747548918
[2025-07-28 15:49:58] 2025-07-28 13:49:58,579 [wrapper] cleanup supervisor_pilot  146072 118434
[2025-07-28 15:49:58] 2025-07-28 13:49:58,582 [wrapper] Test setup, not cleaning
[2025-07-28 15:49:58] 2025-07-28 13:49:58,585 [wrapper] apfmon messages muted
[2025-07-28 15:49:58] 2025-07-28 13:49:58,588 [wrapper] ==== wrapper stdout END ====
[2025-07-28 15:49:58] 2025-07-28 13:49:58,591 [wrapper] ==== wrapper stderr END ====
[2025-07-28 15:49:58]  *** Error codes and diagnostics ***
[2025-07-28 15:49:58]     "exeErrorCode": 0,
[2025-07-28 15:49:58]     "exeErrorDiag": "",
[2025-07-28 15:49:58]     "pilotErrorCode": 0,
[2025-07-28 15:49:58]     "pilotErrorDiag": "",
[2025-07-28 15:49:58]  *** Listing of results directory ***
[2025-07-28 15:49:58] total 348924
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc    530466 Jul 27 18:55 pilot3.tar.gz
[2025-07-28 15:49:58] -rwx------ 1 boinc boinc     36292 Jul 27 19:19 runpilot2-wrapper.sh
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc      5112 Jul 27 19:19 queuedata.json
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc       100 Jul 28 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 15:49:58] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 12:43 run_atlas
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc       105 Jul 28 12:43 job.xml
[2025-07-28 15:49:58] -rw-r--r-- 2 boinc boinc 144588864 Jul 28 12:43 EVNT.45743347._002822.pool.root.1
[2025-07-28 15:49:58] drwxrwx--x 2 boinc boinc      4096 Jul 28 12:43 shared
[2025-07-28 15:49:58] -rw-r--r-- 2 boinc boinc    542889 Jul 28 12:43 input.tar.gz
[2025-07-28 15:49:58] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:43 start_atlas.sh
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc         0 Jul 28 12:43 boinc_setup_complete
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc      6282 Jul 28 12:43 init_data.xml
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc         0 Jul 28 12:43 boinc_lockfile
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc      2562 Jul 28 12:43 pandaJob.out
[2025-07-28 15:49:58] -rw------- 1 boinc boinc    978460 Jul 28 12:43 agis_schedconf.cvmfs.json
[2025-07-28 15:49:58] drwx------ 4 boinc boinc      4096 Jul 28 12:43 pilot3
[2025-07-28 15:49:58] -rw------- 1 boinc boinc 206232596 Jul 28 15:48 HITS.45743349._052785.pool.root.1
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc       531 Jul 28 15:49 boinc_task_state.xml
[2025-07-28 15:49:58] -rw------- 1 boinc boinc        95 Jul 28 15:49 pilot_heartbeat.json
[2025-07-28 15:49:58] -rw------- 1 boinc boinc      1057 Jul 28 15:49 memory_monitor_summary.json
[2025-07-28 15:49:58] -rw------- 1 boinc boinc   1593052 Jul 28 15:49 agis_ddmendpoints.agis.ALL.json
[2025-07-28 15:49:58] -rw------- 1 boinc boinc    271162 Jul 28 15:49 log.45743349._052785.job.log.tgz.1
[2025-07-28 15:49:58] -rw------- 1 boinc boinc      7832 Jul 28 15:49 heartbeat.json
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc      8192 Jul 28 15:49 boinc_mmap_file
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc        28 Jul 28 15:49 wrapper_checkpoint.txt
[2025-07-28 15:49:58] -rw------- 1 boinc boinc       746 Jul 28 15:49 pilotlog.txt
[2025-07-28 15:49:58] -rw------- 1 boinc boinc   1029942 Jul 28 15:49 log.45743349._052785.job.log.1
[2025-07-28 15:49:58] -rw------- 1 boinc boinc       357 Jul 28 15:49 output.list
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc       620 Jul 28 15:49 runtime_log
[2025-07-28 15:49:58] -rw------- 1 boinc boinc   1320960 Jul 28 15:49 result.tar.gz
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc      8760 Jul 28 15:49 runtime_log.err
[2025-07-28 15:49:58] -rw------- 1 boinc boinc       672 Jul 28 15:49 bmULDmUDK07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSxVLDmLOsdWo.diag
[2025-07-28 15:49:58] -rw-r--r-- 1 boinc boinc     21179 Jul 28 15:49 stderr.txt
[2025-07-28 15:49:58] HITS file was successfully produced:
[2025-07-28 15:49:58] -rw------- 1 boinc boinc 206232596 Jul 28 15:48 shared/HITS.pool.root.1
[2025-07-28 15:49:58]  *** Contents of shared directory: ***
[2025-07-28 15:49:58] total 344448
[2025-07-28 15:49:58] -rw-r--r-- 2 boinc boinc 144588864 Jul 28 12:43 ATLAS.root_0
[2025-07-28 15:49:58] -rw-r--r-- 2 boinc boinc    542889 Jul 28 12:43 input.tar.gz
[2025-07-28 15:49:58] -rw-r--r-- 2 boinc boinc     15095 Jul 28 12:43 start_atlas.sh
[2025-07-28 15:49:58] -rw------- 1 boinc boinc 206232596 Jul 28 15:48 HITS.pool.root.1
[2025-07-28 15:49:58] -rw------- 1 boinc boinc   1320960 Jul 28 15:49 result.tar.gz
15:50:00 (114803): run_atlas exited; CPU time 21757.103568
15:50:00 (114803): called boinc_finish(0)

</stderr_txt>
]]>

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