Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:20 (2509647): wrapper (7.7.26015): starting
18:22:20 (2509647): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:22:20] Arguments: --nthreads 8
[2025-07-27 18:22:20] Threads: 8
[2025-07-27 18:22:20] Checking for CVMFS
[2025-07-27 18:22:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:22:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:22:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:22:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:22:21] 2.13.1.0 1187368 13548 285924 148827 1 371 36844688 40960001 13892 16776704 0 84555138 99.672 98530748 31321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 18:22:21] CVMFS is ok
[2025-07-27 18:22:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:22:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:22:21] Further information can be found at the LHC@home message board.
[2025-07-27 18:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:22:21] Checking for apptainer binary...
[2025-07-27 18:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:22:21] Running /usr/bin/apptainer --version
[2025-07-27 18:22:21] apptainer version 1.4.1-1.el9
[2025-07-27 18:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:22:21] c-212-19.aglt2.org
[2025-07-27 18:22:21] apptainer works
[2025-07-27 18:22:21] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:22:21] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:22:21] Starting ATLAS job with PandaID=6747413084
[2025-07-27 18:22:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:45:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:45:10]  storage_token=
[2025-07-27 19:45:10]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6747413084/log.45743349._049967.job.log.tgz.1
[2025-07-27 19:45:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/92/log.45743349._049967.job.log.tgz.1
[2025-07-27 19:45:10]  workdir=None
[2025-07-27 19:45:10] ]
[2025-07-27 19:45:10] 2025-07-27 23:44:24,181 | INFO     | transferring file log.45743349._049967.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6747413084/log.45743349._049967.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 19:45:10] 2025-07-27 23:44:24,181 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6747413084/log.45743349._049967.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._049967.job
[2025-07-27 19:45:10] 2025-07-27 23:44:24,203 | INFO     | adding to output.list: log.45743349._049967.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/92/log.45743349._049967.job.log.tg
[2025-07-27 19:45:10] 2025-07-27 23:44:24,204 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 19:45:10] 2025-07-27 23:44:24,204 | INFO     | summary of transferred files:
[2025-07-27 19:45:10] 2025-07-27 23:44:24,205 | INFO     |  -- lfn=log.45743349._049967.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 19:45:10] 2025-07-27 23:44:24,205 | INFO     | stage-out finished correctly
[2025-07-27 19:45:10] 2025-07-27 23:44:24,357 | INFO     | monitor loop #355: job 0:6747413084 is in state 'finished'
[2025-07-27 19:45:10] 2025-07-27 23:44:24,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:45:10] 2025-07-27 23:44:25,227 | INFO     | PID=2513403 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 19:45:10] 2025-07-27 23:44:25,227 | INFO     | .. there are 18 such processes running
[2025-07-27 19:45:10] 2025-07-27 23:44:26,860 | INFO     | monitor loop #356: job 0:6747413084 is in state 'finished'
[2025-07-27 19:45:10] 2025-07-27 23:44:26,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:45:10] 2025-07-27 23:44:27,407 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 19:45:10] 2025-07-27 23:44:29,366 | INFO     | monitor loop #357: job 0:6747413084 is in state 'finished'
[2025-07-27 19:45:10] 2025-07-27 23:44:29,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:45:10] 2025-07-27 23:44:30,392 | INFO     | job 6747413084 has state=finished
[2025-07-27 19:45:10] 2025-07-27 23:44:30,392 | INFO     | preparing for final server update for job 6747413084 in state='finished'
[2025-07-27 19:45:10] 2025-07-27 23:44:30,393 | INFO     | this job has now completed (state=finished)
[2025-07-27 19:45:10] 2025-07-27 23:44:30,393 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 19:45:10] 2025-07-27 23:44:30,393 | INFO     | log transfer has been attempted: DONE
[2025-07-27 19:45:10] 2025-07-27 23:44:30,393 | INFO     | job 6747413084 has finished - writing final server update
[2025-07-27 19:45:10] 2025-07-27 23:44:30,393 | INFO     | total number of processed events: 400 (read)
[2025-07-27 19:45:10] 2025-07-27 23:44:30,395 | INFO     | executing command: lscpu
[2025-07-27 19:45:10] 2025-07-27 23:44:30,465 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 19:45:10] 2025-07-27 23:44:31,870 | INFO     | monitor loop #358: job 0:6747413084 is in state 'finished'
[2025-07-27 19:45:10] 2025-07-27 23:44:31,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:45:10] 2025-07-27 23:44:34,377 | INFO     | monitor loop #359: job 0:6747413084 is in state 'finished'
[2025-07-27 19:45:10] 2025-07-27 23:44:34,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:45:10] 2025-07-27 23:44:36,517 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:45:10] 2025-07-27 23:44:36,529 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3046.7879166666667
[2025-07-27 19:45:10] 2025-07-27 23:44:36,542 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6747413084/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:45:10] 2025-07-27 23:44:36,543 | INFO     | extracted standard info from prmon json
[2025-07-27 19:45:10] 2025-07-27 23:44:36,543 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:45:10] 2025-07-27 23:44:36,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:45:10] 2025-07-27 23:44:36,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:45:10] 2025-07-27 23:44:36,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:45:10] 2025-07-27 23:44:36,545 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:45:10] 2025-07-27 23:44:36,545 | INFO     | sum of square deviations: 120605052.0
[2025-07-27 19:45:10] 2025-07-27 23:44:36,545 | INFO     | sum of deviations: -6961857227.000001
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | mean x: 1753657487.0
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | mean y: 2622444.7260273974
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | -- intersect: 101231491775.61948
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | intersect: 101231491775.61948
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | chi2: 0.012164683990035027
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | -- intersect: 101231491775.61948
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | current memory leak: -57.72 B/s (using 73 data points, chi2=0.01)
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | could have reported an average CPU frequency of 3098 MHz (6 samples)
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | ..............................
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | . Timing measurements:
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | . get job = 0 s
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | . initial setup = 2 s
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | . payload setup = 8 s
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | . stage-in = 0 s
[2025-07-27 19:45:10] 2025-07-27 23:44:36,546 | INFO     | . payload execution = 4878 s
[2025-07-27 19:45:10] 2025-07-27 23:44:36,547 | INFO     | . stage-out = 0 s
[2025-07-27 19:45:10] 2025-07-27 23:44:36,547 | INFO     | . log creation = 0 s
[2025-07-27 19:45:10] 2025-07-27 23:44:36,547 | INFO     | ..............................
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | 
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | job summary report
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | --------------------------------------------------
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | PanDA job id: 6747413084
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | task id: 45743349
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | errors: (none)
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | pilot state: finished 
[2025-07-27 19:45:10] 2025-07-27 23:44:37,015 | INFO     | transexitcode: 0
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | exeerrorcode: 0
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | exeerrordiag: 
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | exitcode: 0
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | exitmsg: OK
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | cpuconsumptiontime: 36222 s
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | nevents: 400
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | neventsw: 0
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | pid: 2520649
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | pgrp: 2520649
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | corecount: 8
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | event service: False
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | sizes: {0: 2396645, 1: 2397501, 7: 2397763, 12: 2397791, 4891: 2423903, 4893: 2432901, 4896: 2433085, 4906: 2433279}
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | --------------------------------------------------
[2025-07-27 19:45:10] 2025-07-27 23:44:37,016 | INFO     | 
[2025-07-27 19:45:10] 2025-07-27 23:44:37,017 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 19:45:10] 2025-07-27 23:44:37,039 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | job 6747413084 has completed (purged errors)
[2025-07-27 19:45:10] 2025-07-27 23:44:37,041 | INFO     | overall cleanup function is called
[2025-07-27 19:45:10] 2025-07-27 23:44:38,049 | INFO     | --- collectZombieJob: --- 10, [2520649]
[2025-07-27 19:45:10] 2025-07-27 23:44:38,049 | INFO     | zombie collector waiting for pid 2520649
[2025-07-27 19:45:10] 2025-07-27 23:44:38,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:45:10] 2025-07-27 23:44:38,049 | INFO     | collected zombie processes
[2025-07-27 19:45:10] 2025-07-27 23:44:38,049 | INFO     | will attempt to kill all subprocesses of pid=2520649
[2025-07-27 19:45:10] 2025-07-27 23:44:38,500 | INFO     | process IDs to be killed: [2520649] (in reverse order)
[2025-07-27 19:45:10] 2025-07-27 23:44:38,642 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:45:10] 2025-07-27 23:44:38,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:45:10] 2025-07-27 23:44:38,659 | INFO     | did not find any defunct processes belonging to 2520649
[2025-07-27 19:45:10] 2025-07-27 23:44:38,675 | INFO     | did not find any defunct processes belonging to 2520649
[2025-07-27 19:45:10] 2025-07-27 23:44:38,675 | INFO     | ready for new job
[2025-07-27 19:45:10] 2025-07-27 23:44:38,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:45:10] 2025-07-27 23:44:38,677 | INFO     | ***************************************
[2025-07-27 19:45:10] 2025-07-27 23:44:38,677 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:45:10] 2025-07-27 23:44:38,677 | INFO     | ***************************************
[2025-07-27 19:45:10] 2025-07-27 23:44:38,677 | INFO     | 
[2025-07-27 19:45:10] 2025-07-27 23:44:38,682 | INFO     | architecture information:
[2025-07-27 19:45:10] 2025-07-27 23:44:38,683 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:45:10] 2025-07-27 23:44:38,700 | INFO     | cat /etc/os-release:
[2025-07-27 19:45:10] NAME="CentOS Linux"
[2025-07-27 19:45:10] VERSION="7 (Core)"
[2025-07-27 19:45:10] ID="centos"
[2025-07-27 19:45:10] ID_LIKE="rhel fedora"
[2025-07-27 19:45:10] VERSION_ID="7"
[2025-07-27 19:45:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:45:10] ANSI_COLOR="0;31"
[2025-07-27 19:45:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:45:10] HOME_URL="https://www.centos.org/"
[2025-07-27 19:45:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:45:10] 
[2025-07-27 19:45:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:45:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:45:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:45:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:45:10] 
[2025-07-27 19:45:10] 2025-07-27 23:44:38,700 | INFO     | ***************************************
[2025-07-27 19:45:10] 2025-07-27 23:44:39,202 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 19:45:10] 2025-07-27 23:44:39,216 | INFO     | sufficient remaining disk space (129189806080 B)
[2025-07-27 19:45:10] 2025-07-27 23:44:39,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:45:10] 2025-07-27 23:44:39,216 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:45:10] 2025-07-27 23:44:39,217 | INFO     | update_server=False
[2025-07-27 19:45:10] 2025-07-27 23:44:39,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:45:10] 2025-07-27 23:44:39,220 | INFO     | all payload control threads have been joined
[2025-07-27 19:45:10] 2025-07-27 23:44:39,384 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 19:45:10] 2025-07-27 23:44:39,384 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 19:45:10] 2025-07-27 23:44:39,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:45:10] 2025-07-27 23:44:39,384 | INFO     | will abort loop
[2025-07-27 19:45:10] 2025-07-27 23:44:39,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:45:10] 2025-07-27 23:44:39,888 | INFO     | all data control threads have been joined
[2025-07-27 19:45:10] 2025-07-27 23:44:40,222 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:40,225 | INFO     | [payload] control thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:40,243 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:40,362 | INFO     | [job] validate thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:40,389 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:40,535 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:40,857 | INFO     | all job control threads have been joined
[2025-07-27 19:45:10] 2025-07-27 23:44:40,893 | INFO     | [data] control thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:40,932 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:41,112 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:41,166 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:41,190 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:41,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:45:10] 2025-07-27 23:44:41,791 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:41,862 | INFO     | [job] control thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:42,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:45:10] 2025-07-27 23:44:42,641 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:46,491 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:49,645 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:45:10] 2025-07-27 23:44:50,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:45:10] 2025-07-27 23:44:52,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275367929664)>', '<ExcThread(monitor, started 140274864989952)>']
[2025-07-27 19:45:10] 2025-07-27 23:44:57,310 | INFO     | all workflow threads have been joined
[2025-07-27 19:45:10] 2025-07-27 23:44:57,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:45:10] 2025-07-27 23:44:57,310 | INFO     | traces error code: 0
[2025-07-27 19:45:10] 2025-07-27 23:44:57,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:45:10] 2025-07-27 23:45:09,845 | INFO     | PID=2513403 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:45:10] 2025-07-27 23:45:09,845 | INFO     | .. there are 17 such processes running
[2025-07-27 19:45:10] 2025-07-27 23:45:09,846 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:45:10] 2025-07-27 23:45:09,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:45:10] 2025-07-27 23:45:09,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:45:10] 2025-07-27 23:45:09,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:45:10] 2025-07-27 23:45:09,846 | INFO     | [monitor] control thread has ended
[2025-07-27 19:45:10] 2025-07-27 23:45:10,061 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:45:10] 2025-07-27 23:45:10,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:45:10] 2025-07-27 23:45:10,069 [wrapper] pilotpid: 2513403
[2025-07-27 19:45:10] 2025-07-27 23:45:10,072 [wrapper] Pilot exit status: 0
[2025-07-27 19:45:10] 2025-07-27 23:45:10,086 [wrapper] pandaids: 6747413084
[2025-07-27 19:45:10] 2025-07-27 23:45:10,187 [wrapper] cleanup supervisor_pilot 4183604 2513404
[2025-07-27 19:45:10] 2025-07-27 23:45:10,192 [wrapper] Test setup, not cleaning
[2025-07-27 19:45:10] 2025-07-27 23:45:10,196 [wrapper] apfmon messages muted
[2025-07-27 19:45:10] 2025-07-27 23:45:10,201 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:45:10] 2025-07-27 23:45:10,206 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:45:10]  *** Error codes and diagnostics ***
[2025-07-27 19:45:10]     "exeErrorCode": 0,
[2025-07-27 19:45:10]     "exeErrorDiag": "",
[2025-07-27 19:45:10]     "pilotErrorCode": 0,
[2025-07-27 19:45:10]     "pilotErrorDiag": "",
[2025-07-27 19:45:10]  *** Listing of results directory ***
[2025-07-27 19:45:10] total 359624
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:11 pilot3.tar.gz
[2025-07-27 19:45:10] -rwx------. 1 boincer umatlas     36292 Jul 27 10:23 runpilot2-wrapper.sh
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:23 queuedata.json
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:45:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:22 run_atlas
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:22 job.xml
[2025-07-27 19:45:10] -rw-r--r--. 2 boincer umatlas 150730785 Jul 27 18:22 EVNT.45743347._002778.pool.root.1
[2025-07-27 19:45:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:22 start_atlas.sh
[2025-07-27 19:45:10] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:22 shared
[2025-07-27 19:45:10] -rw-r--r--. 2 boincer umatlas    542886 Jul 27 18:22 input.tar.gz
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:22 boinc_lockfile
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 18:22 pandaJob.out
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas    980109 Jul 27 18:22 agis_schedconf.cvmfs.json
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:22 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:45:10] drwx------. 4 boincer umatlas      4096 Jul 27 18:22 pilot3
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 19:40 init_data.xml
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas       529 Jul 27 19:43 boinc_task_state.xml
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas 212094140 Jul 27 19:43 HITS.45743349._049967.pool.root.1
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas      1035 Jul 27 19:44 memory_monitor_summary.json
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas    296598 Jul 27 19:44 log.45743349._049967.job.log.tgz.1
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas      7772 Jul 27 19:44 heartbeat.json
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas        95 Jul 27 19:45 pilot_heartbeat.json
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas       823 Jul 27 19:45 pilotlog.txt
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas        27 Jul 27 19:45 wrapper_checkpoint.txt
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas    480401 Jul 27 19:45 log.45743349._049967.job.log.1
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 19:45 boinc_mmap_file
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas       357 Jul 27 19:45 output.list
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas       620 Jul 27 19:45 runtime_log
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas    798720 Jul 27 19:45 result.tar.gz
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 19:45 runtime_log.err
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas       654 Jul 27 19:45 p98LDmoSH07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnXVLDmtSBozm.diag
[2025-07-27 19:45:10] -rw-r--r--. 1 boincer umatlas     22307 Jul 27 19:45 stderr.txt
[2025-07-27 19:45:10] HITS file was successfully produced:
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas 212094140 Jul 27 19:43 shared/HITS.pool.root.1
[2025-07-27 19:45:10]  *** Contents of shared directory: ***
[2025-07-27 19:45:10] total 355656
[2025-07-27 19:45:10] -rw-r--r--. 2 boincer umatlas 150730785 Jul 27 18:22 ATLAS.root_0
[2025-07-27 19:45:10] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:22 start_atlas.sh
[2025-07-27 19:45:10] -rw-r--r--. 2 boincer umatlas    542886 Jul 27 18:22 input.tar.gz
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas 212094140 Jul 27 19:43 HITS.pool.root.1
[2025-07-27 19:45:10] -rw-------. 1 boincer umatlas    798720 Jul 27 19:45 result.tar.gz
19:45:11 (2509647): run_atlas exited; CPU time 36405.923460
19:45:11 (2509647): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN