Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:59:53 (2174): wrapper (7.7.26015): starting
18:59:53 (2174): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:59:53] Arguments: --nthreads 8
[2025-07-27 18:59:53] Threads: 8
[2025-07-27 18:59:53] Checking for CVMFS
[2025-07-27 18:59:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:59:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:59:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:59:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:59:54] 2.11.2.0 2964 13987 72668 148827 3 59 12731574 20275200 1 130560 0 5793509 99.986 464991 37243 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:59:54] CVMFS is ok
[2025-07-27 18:59:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:59:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:59:54] Further information can be found at the LHC@home message board.
[2025-07-27 18:59:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:59:54] Checking for apptainer binary...
[2025-07-27 18:59:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:59:54] Running /usr/bin/apptainer --version
[2025-07-27 18:59:54] apptainer version 1.3.2-1.el7
[2025-07-27 18:59:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:59:55] c-204-23.aglt2.org
[2025-07-27 18:59:55] apptainer works
[2025-07-27 18:59:55] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:59:55] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:59:55] Starting ATLAS job with PandaID=6747548877
[2025-07-27 18:59:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:29:26 (2814): wrapper (7.7.26015): starting
20:29:26 (2814): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 20:29:26] Arguments: --nthreads 8
[2025-07-27 20:29:26] Threads: 8
[2025-07-27 20:29:26] This job has been restarted, cleaning up previous attempt
[2025-07-27 20:29:26] Checking for CVMFS
[2025-07-27 20:29:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:29:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:29:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:29:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:29:27] 2.11.2.0 2964 14076 71992 148829 1 9 12737846 20275200 1 130560 0 5867411 99.986 467599 37261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 20:29:27] CVMFS is ok
[2025-07-27 20:29:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:29:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:29:27] Further information can be found at the LHC@home message board.
[2025-07-27 20:29:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:29:27] Checking for apptainer binary...
[2025-07-27 20:29:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:29:27] Running /usr/bin/apptainer --version
[2025-07-27 20:29:27] apptainer version 1.3.2-1.el7
[2025-07-27 20:29:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:29:29] c-204-23.aglt2.org
[2025-07-27 20:29:29] apptainer works
[2025-07-27 20:29:29] Set ATHENA_PROC_NUMBER=8
[2025-07-27 20:29:29] Set ATHENA_CORE_NUMBER=8
[2025-07-27 20:29:29] Starting ATLAS job with PandaID=6747548877
[2025-07-27 20:29:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:47:37]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:47:37] 2025-07-28 02:47:19,799 | INFO     | monitor loop #610: job 0:6747548877 is in state 'finished'
[2025-07-27 22:47:37] 2025-07-28 02:47:19,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:47:37] 2025-07-28 02:47:20,660 | INFO     | PID=6587 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 22:47:37] 2025-07-28 02:47:22,303 | INFO     | monitor loop #611: job 0:6747548877 is in state 'finished'
[2025-07-27 22:47:37] 2025-07-28 02:47:22,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,236 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 22:47:37] 2025-07-28 02:47:23,239 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-07-27 22:47:37] 2025-07-28 02:47:23,242 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6747548877/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,243 | INFO     | extracted standard info from prmon json
[2025-07-27 22:47:37] 2025-07-28 02:47:23,243 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:47:37] 2025-07-28 02:47:23,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:47:37] 2025-07-28 02:47:23,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:47:37] 2025-07-28 02:47:23,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:47:37] 2025-07-28 02:47:23,247 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:47:37] 2025-07-28 02:47:23,247 | INFO     | sum of square deviations: 762879420.0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,248 | INFO     | sum of deviations: -7914295794.000007
[2025-07-27 22:47:37] 2025-07-28 02:47:23,248 | INFO     | mean x: 1753666705.0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,248 | INFO     | mean y: 2562231.822222222
[2025-07-27 22:47:37] 2025-07-28 02:47:23,248 | INFO     | -- intersect: 18195525187.17282
[2025-07-27 22:47:37] 2025-07-28 02:47:23,249 | INFO     | intersect: 18195525187.17282
[2025-07-27 22:47:37] 2025-07-28 02:47:23,249 | INFO     | chi2: 1.6180808826911834
[2025-07-27 22:47:37] 2025-07-28 02:47:23,249 | INFO     | sum of square deviations: 681212772.5
[2025-07-27 22:47:37] 2025-07-28 02:47:23,250 | INFO     | sum of deviations: -7012400484.999999
[2025-07-27 22:47:37] 2025-07-28 02:47:23,250 | INFO     | mean x: 1753666552.5
[2025-07-27 22:47:37] 2025-07-28 02:47:23,250 | INFO     | mean y: 2563916.7846153844
[2025-07-27 22:47:37] 2025-07-28 02:47:23,250 | INFO     | -- intersect: 18054797638.34079
[2025-07-27 22:47:37] 2025-07-28 02:47:23,250 | INFO     | intersect: 18054797638.34079
[2025-07-27 22:47:37] 2025-07-28 02:47:23,251 | INFO     | chi2: 1.6183103991696248
[2025-07-27 22:47:37] 2025-07-28 02:47:23,251 | INFO     | current chi2=1.6183103991696248 (change=-0.014184487369979442 %)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,251 | INFO     | right removable region: 129
[2025-07-27 22:47:37] 2025-07-28 02:47:23,251 | INFO     | sum of square deviations: 681212772.5
[2025-07-27 22:47:37] 2025-07-28 02:47:23,252 | INFO     | sum of deviations: -28518767000.5
[2025-07-27 22:47:37] 2025-07-28 02:47:23,252 | INFO     | mean x: 1753666857.5
[2025-07-27 22:47:37] 2025-07-28 02:47:23,252 | INFO     | mean y: 2600066.4846153846
[2025-07-27 22:47:37] 2025-07-28 02:47:23,252 | INFO     | -- intersect: 73419333463.89246
[2025-07-27 22:47:37] 2025-07-28 02:47:23,252 | INFO     | intersect: 73419333463.89246
[2025-07-27 22:47:37] 2025-07-28 02:47:23,252 | INFO     | chi2: 0.13644321364447373
[2025-07-27 22:47:37] 2025-07-28 02:47:23,253 | INFO     | current chi2=0.13644321364447373 (change=91.56759003186899 %)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,253 | INFO     | sum of square deviations: 605592750.0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,253 | INFO     | sum of deviations: -27311062007.999996
[2025-07-27 22:47:37] 2025-07-28 02:47:23,254 | INFO     | mean x: 1753667010.0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,254 | INFO     | mean y: 2597547.72
[2025-07-27 22:47:37] 2025-07-28 02:47:23,254 | INFO     | -- intersect: 79089588684.08012
[2025-07-27 22:47:37] 2025-07-28 02:47:23,254 | INFO     | intersect: 79089588684.08012
[2025-07-27 22:47:37] 2025-07-28 02:47:23,254 | INFO     | chi2: 0.11932833374783325
[2025-07-27 22:47:37] 2025-07-28 02:47:23,254 | INFO     | current chi2=0.11932833374783325 (change=12.54359190134311 %)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,254 | INFO     | left removable region: 20
[2025-07-27 22:47:37] 2025-07-28 02:47:23,255 | INFO     | sum of square deviations: 401533110.0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,255 | INFO     | sum of deviations: -19570475914.000004
[2025-07-27 22:47:37] 2025-07-28 02:47:23,255 | INFO     | mean x: 1753667132.0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,255 | INFO     | mean y: 2586503.8256880734
[2025-07-27 22:47:37] 2025-07-28 02:47:23,256 | INFO     | -- intersect: 85475239974.36877
[2025-07-27 22:47:37] 2025-07-28 02:47:23,256 | INFO     | intersect: 85475239974.36877
[2025-07-27 22:47:37] 2025-07-28 02:47:23,256 | INFO     | chi2: 0.11121880673366179
[2025-07-27 22:47:37] 2025-07-28 02:47:23,256 | INFO     | -- intersect: 85475239974.36877
[2025-07-27 22:47:37] 2025-07-28 02:47:23,256 | INFO     | current memory leak: -48.74 B/s (using 109 data points, chi2=0.11)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | ..............................
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | . Timing measurements:
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | . get job = 0 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | . initial setup = 1 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | . payload setup = 12 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | . stage-in = 0 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,257 | INFO     | . payload execution = 8216 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,258 | INFO     | . stage-out = 2 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,258 | INFO     | . log creation = 0 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,258 | INFO     | ..............................
[2025-07-27 22:47:37] 2025-07-28 02:47:23,836 | INFO     | 
[2025-07-27 22:47:37] 2025-07-28 02:47:23,836 | INFO     | job summary report
[2025-07-27 22:47:37] 2025-07-28 02:47:23,837 | INFO     | --------------------------------------------------
[2025-07-27 22:47:37] 2025-07-28 02:47:23,837 | INFO     | PanDA job id: 6747548877
[2025-07-27 22:47:37] 2025-07-28 02:47:23,837 | INFO     | task id: 45743349
[2025-07-27 22:47:37] 2025-07-28 02:47:23,837 | INFO     | errors: (none)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,837 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:47:37] 2025-07-28 02:47:23,838 | INFO     | pilot state: finished 
[2025-07-27 22:47:37] 2025-07-28 02:47:23,838 | INFO     | transexitcode: 0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,838 | INFO     | exeerrorcode: 0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,838 | INFO     | exeerrordiag: 
[2025-07-27 22:47:37] 2025-07-28 02:47:23,838 | INFO     | exitcode: 0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,839 | INFO     | exitmsg: OK
[2025-07-27 22:47:37] 2025-07-28 02:47:23,839 | INFO     | cpuconsumptiontime: 62225 s
[2025-07-27 22:47:37] 2025-07-28 02:47:23,839 | INFO     | nevents: 400
[2025-07-27 22:47:37] 2025-07-28 02:47:23,839 | INFO     | neventsw: 0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,839 | INFO     | pid: 13305
[2025-07-27 22:47:37] 2025-07-28 02:47:23,839 | INFO     | pgrp: 13305
[2025-07-27 22:47:37] 2025-07-28 02:47:23,840 | INFO     | corecount: 8
[2025-07-27 22:47:37] 2025-07-28 02:47:23,840 | INFO     | event service: False
[2025-07-27 22:47:37] 2025-07-28 02:47:23,840 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 8232: 2425672, 8235: 2434854, 8242: 2434992}
[2025-07-27 22:47:37] 2025-07-28 02:47:23,840 | INFO     | --------------------------------------------------
[2025-07-27 22:47:37] 2025-07-28 02:47:23,841 | INFO     | 
[2025-07-27 22:47:37] 2025-07-28 02:47:23,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 22:47:37] 2025-07-28 02:47:23,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:47:37] 2025-07-28 02:47:23,874 | INFO     | job 6747548877 has completed (purged errors)
[2025-07-27 22:47:37] 2025-07-28 02:47:23,874 | INFO     | overall cleanup function is called
[2025-07-27 22:47:37] 2025-07-28 02:47:24,882 | INFO     | --- collectZombieJob: --- 10, [13305]
[2025-07-27 22:47:37] 2025-07-28 02:47:24,883 | INFO     | zombie collector waiting for pid 13305
[2025-07-27 22:47:37] 2025-07-28 02:47:24,883 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:47:37] 2025-07-28 02:47:24,883 | INFO     | collected zombie processes
[2025-07-27 22:47:37] 2025-07-28 02:47:24,883 | INFO     | will attempt to kill all subprocesses of pid=13305
[2025-07-27 22:47:37] 2025-07-28 02:47:24,981 | INFO     | process IDs to be killed: [13305] (in reverse order)
[2025-07-27 22:47:37] 2025-07-28 02:47:25,040 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:47:37] 2025-07-28 02:47:25,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:47:37] 2025-07-28 02:47:25,046 | INFO     | did not find any defunct processes belonging to 13305
[2025-07-27 22:47:37] 2025-07-28 02:47:25,050 | INFO     | did not find any defunct processes belonging to 13305
[2025-07-27 22:47:37] 2025-07-28 02:47:25,051 | INFO     | ready for new job
[2025-07-27 22:47:37] 2025-07-28 02:47:25,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:47:37] 2025-07-28 02:47:25,053 | INFO     | ***************************************
[2025-07-27 22:47:37] 2025-07-28 02:47:25,054 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:47:37] 2025-07-28 02:47:25,054 | INFO     | ***************************************
[2025-07-27 22:47:37] 2025-07-28 02:47:25,054 | INFO     | 
[2025-07-27 22:47:37] 2025-07-28 02:47:25,055 | INFO     | architecture information:
[2025-07-27 22:47:37] 2025-07-28 02:47:25,055 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:47:37] 2025-07-28 02:47:25,072 | INFO     | cat /etc/os-release:
[2025-07-27 22:47:37] NAME="CentOS Linux"
[2025-07-27 22:47:37] VERSION="7 (Core)"
[2025-07-27 22:47:37] ID="centos"
[2025-07-27 22:47:37] ID_LIKE="rhel fedora"
[2025-07-27 22:47:37] VERSION_ID="7"
[2025-07-27 22:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:47:37] ANSI_COLOR="0;31"
[2025-07-27 22:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:47:37] HOME_URL="https://www.centos.org/"
[2025-07-27 22:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:47:37] 
[2025-07-27 22:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:47:37] 
[2025-07-27 22:47:37] 2025-07-28 02:47:25,073 | INFO     | ***************************************
[2025-07-27 22:47:37] 2025-07-28 02:47:25,576 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 22:47:37] 2025-07-28 02:47:25,596 | INFO     | sufficient remaining disk space (18540920832 B)
[2025-07-27 22:47:37] 2025-07-28 02:47:25,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:47:37] 2025-07-28 02:47:25,597 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:47:37] 2025-07-28 02:47:25,597 | INFO     | update_server=False
[2025-07-27 22:47:37] 2025-07-28 02:47:25,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:47:37] 2025-07-28 02:47:25,598 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 22:47:37] 2025-07-28 02:47:25,598 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:47:37] 2025-07-28 02:47:25,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:47:37] 2025-07-28 02:47:25,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:47:37] 2025-07-28 02:47:25,688 | INFO     | all payload control threads have been joined
[2025-07-27 22:47:37] 2025-07-28 02:47:25,748 | INFO     | all data control threads have been joined
[2025-07-27 22:47:37] 2025-07-28 02:47:25,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:47:37] 2025-07-28 02:47:25,818 | INFO     | aborting loop
[2025-07-27 22:47:37] 2025-07-28 02:47:26,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:47:37] 2025-07-28 02:47:26,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:47:37] 2025-07-28 02:47:26,603 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:26,693 | INFO     | [payload] control thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:26,753 | INFO     | [data] control thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:26,824 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:26,826 | INFO     | [job] validate thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:26,989 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:27,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:27,058 | INFO     | all job control threads have been joined
[2025-07-27 22:47:37] 2025-07-28 02:47:27,334 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:27,336 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:27,367 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:28,012 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:28,019 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:28,063 | INFO     | [job] control thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:28,254 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:28,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:47:37] 2025-07-28 02:47:29,371 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:30,358 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:47:37] 2025-07-28 02:47:31,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260139964224)>', '<ExcThread(monitor, started 140259186693888)>']
[2025-07-27 22:47:37] 2025-07-28 02:47:32,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:47:37] 2025-07-28 02:47:32,635 | INFO     | [monitor] control thread has ended
[2025-07-27 22:47:37] 2025-07-28 02:47:36,765 | INFO     | all workflow threads have been joined
[2025-07-27 22:47:37] 2025-07-28 02:47:36,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:47:37] 2025-07-28 02:47:36,767 | INFO     | traces error code: 0
[2025-07-27 22:47:37] 2025-07-28 02:47:36,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:47:37] 2025-07-28 02:47:36,913 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:47:37] 2025-07-28 02:47:36,918 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:47:37] 2025-07-28 02:47:36,923 [wrapper] pilotpid: 6587
[2025-07-27 22:47:37] 2025-07-28 02:47:36,927 [wrapper] Pilot exit status: 0
[2025-07-27 22:47:37] 2025-07-28 02:47:36,946 [wrapper] pandaids: 6747548877 6747548877
[2025-07-27 22:47:37] 2025-07-28 02:47:36,990 [wrapper] cleanup supervisor_pilot 16094 6588
[2025-07-27 22:47:37] 2025-07-28 02:47:36,995 [wrapper] Test setup, not cleaning
[2025-07-27 22:47:37] 2025-07-28 02:47:37,000 [wrapper] apfmon messages muted
[2025-07-27 22:47:37] 2025-07-28 02:47:37,004 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:47:37] 2025-07-28 02:47:37,009 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:47:37]  *** Error codes and diagnostics ***
[2025-07-27 22:47:37]     "exeErrorCode": 0,
[2025-07-27 22:47:37]     "exeErrorDiag": "",
[2025-07-27 22:47:37]     "pilotErrorCode": 0,
[2025-07-27 22:47:37]     "pilotErrorDiag": "",
[2025-07-27 22:47:37]  *** Listing of results directory ***
[2025-07-27 22:47:37] total 657312
[2025-07-27 22:47:37] drwx------ 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas    530466 Jul 27 12:55 pilot3.tar.gz
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas      5112 Jul 27 13:06 queuedata.json
[2025-07-27 22:47:37] -rwx------ 1 boincer umatlas     36292 Jul 27 13:07 runpilot2-wrapper.sh
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas       100 Jul 27 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:47:37] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 18:59 run_atlas
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas       105 Jul 27 18:59 job.xml
[2025-07-27 22:47:37] -rw-r--r-- 3 boincer umatlas 230551553 Jul 27 18:59 EVNT.45743347._002819.pool.root.1
[2025-07-27 22:47:37] -rw-r--r-- 3 boincer umatlas 230551553 Jul 27 18:59 ATLAS.root_0
[2025-07-27 22:47:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:59 start_atlas.sh
[2025-07-27 22:47:37] drwxrwx--x 2 boincer umatlas      4096 Jul 27 18:59 shared
[2025-07-27 22:47:37] -rw-r--r-- 2 boincer umatlas    542893 Jul 27 18:59 input.tar.gz
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas         0 Jul 27 18:59 boinc_lockfile
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 20:29 pandaJob.out
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas    980125 Jul 27 20:29 agis_schedconf.cvmfs.json
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas 205903273 Jul 27 22:46 HITS.45743349._052744.pool.root.1
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas        96 Jul 27 22:46 pilot_heartbeat.json
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas       530 Jul 27 22:46 boinc_task_state.xml
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas      1049 Jul 27 22:47 memory_monitor_summary.json
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas   1593052 Jul 27 22:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas    349308 Jul 27 22:47 log.45743349._052744.job.log.tgz.1
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas      7853 Jul 27 22:47 heartbeat.json
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas      5905 Jul 27 22:47 init_data.xml
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 22:47 boinc_mmap_file
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas        28 Jul 27 22:47 wrapper_checkpoint.txt
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas      4480 Jul 27 22:47 pilotlog.txt
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas    750358 Jul 27 22:47 log.45743349._052744.job.log.1
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas       357 Jul 27 22:47 output.list
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas       620 Jul 27 22:47 runtime_log
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas   1116160 Jul 27 22:47 result.tar.gz
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas      8745 Jul 27 22:47 runtime_log.err
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas       786 Jul 27 22:47 3YTLDmQ1J07nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmswVLDmGGl7In.diag
[2025-07-27 22:47:37] -rw-r--r-- 1 boincer umatlas     23298 Jul 27 22:47 stderr.txt
[2025-07-27 22:47:37] HITS file was successfully produced:
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas 205903273 Jul 27 22:46 shared/HITS.pool.root.1
[2025-07-27 22:47:37]  *** Contents of shared directory: ***
[2025-07-27 22:47:37] total 427872
[2025-07-27 22:47:37] -rw-r--r-- 3 boincer umatlas 230551553 Jul 27 18:59 ATLAS.root_0
[2025-07-27 22:47:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 18:59 start_atlas.sh
[2025-07-27 22:47:37] -rw-r--r-- 2 boincer umatlas    542893 Jul 27 18:59 input.tar.gz
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas 205903273 Jul 27 22:46 HITS.pool.root.1
[2025-07-27 22:47:37] -rw------- 1 boincer umatlas   1116160 Jul 27 22:47 result.tar.gz
22:47:38 (2814): run_atlas exited; CPU time 62149.289502
22:47:38 (2814): called boinc_finish(0)

</stderr_txt>
]]>

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