Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:34 (460346): wrapper (7.7.26015): starting
18:49:34 (460346): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 18:49:34] Arguments: --nthreads 8
[2025-07-27 18:49:34] Threads: 8
[2025-07-27 18:49:34] Checking for CVMFS
[2025-07-27 18:49:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:49:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:49:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:49:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:49:34] 2.13.1.0 645510 14805 263852 148827 3 196 37102219 40960000 9765 16776704 0 52027447 99.795 41430728 36980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 18:49:34] CVMFS is ok
[2025-07-27 18:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 18:49:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 18:49:34] Further information can be found at the LHC@home message board.
[2025-07-27 18:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:49:34] Checking for apptainer binary...
[2025-07-27 18:49:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 18:49:34] Running /usr/bin/apptainer --version
[2025-07-27 18:49:34] apptainer version 1.4.1-1.el9
[2025-07-27 18:49:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:49:34] c-212-5.aglt2.org
[2025-07-27 18:49:34] apptainer works
[2025-07-27 18:49:34] Set ATHENA_PROC_NUMBER=8
[2025-07-27 18:49:34] Set ATHENA_CORE_NUMBER=8
[2025-07-27 18:49:35] Starting ATLAS job with PandaID=6747413371
[2025-07-27 18:49:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:05:14]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:05:14]  scope=mc23_13p6TeV
[2025-07-27 20:05:14]  status=None
[2025-07-27 20:05:14]  status_code=0
[2025-07-27 20:05:14]  storage_token=
[2025-07-27 20:05:14]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6747413371/log.45743349._050145.job.log.tgz.1
[2025-07-27 20:05:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/2e/log.45743349._050145.job.log.tgz.1
[2025-07-27 20:05:14]  workdir=None
[2025-07-27 20:05:14] ]
[2025-07-27 20:05:14] 2025-07-28 00:04:32,577 | INFO     | transferring file log.45743349._050145.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6747413371/log.45743349._050145.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 20:05:14] 2025-07-28 00:04:32,577 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6747413371/log.45743349._050145.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._050145.job
[2025-07-27 20:05:14] 2025-07-28 00:04:32,599 | INFO     | adding to output.list: log.45743349._050145.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/2e/log.45743349._050145.job.log.tg
[2025-07-27 20:05:14] 2025-07-28 00:04:32,600 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:05:14] 2025-07-28 00:04:32,600 | INFO     | summary of transferred files:
[2025-07-27 20:05:14] 2025-07-28 00:04:32,600 | INFO     |  -- lfn=log.45743349._050145.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:05:14] 2025-07-28 00:04:32,600 | INFO     | stage-out finished correctly
[2025-07-27 20:05:14] 2025-07-28 00:04:34,512 | INFO     | monitor loop #331: job 0:6747413371 is in state 'finished'
[2025-07-27 20:05:14] 2025-07-28 00:04:34,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:05:14] 2025-07-28 00:04:35,790 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:05:14] 2025-07-28 00:04:37,015 | INFO     | monitor loop #332: job 0:6747413371 is in state 'finished'
[2025-07-27 20:05:14] 2025-07-28 00:04:37,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:05:14] 2025-07-28 00:04:37,152 | INFO     | job 6747413371 has state=finished
[2025-07-27 20:05:14] 2025-07-28 00:04:37,152 | INFO     | preparing for final server update for job 6747413371 in state='finished'
[2025-07-27 20:05:14] 2025-07-28 00:04:37,153 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:05:14] 2025-07-28 00:04:37,153 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:05:14] 2025-07-28 00:04:37,153 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:05:14] 2025-07-28 00:04:37,153 | INFO     | job 6747413371 has finished - writing final server update
[2025-07-27 20:05:14] 2025-07-28 00:04:37,153 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:05:14] 2025-07-28 00:04:37,154 | INFO     | executing command: lscpu
[2025-07-27 20:05:14] 2025-07-28 00:04:37,218 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:05:14] 2025-07-28 00:04:39,518 | INFO     | monitor loop #333: job 0:6747413371 is in state 'finished'
[2025-07-27 20:05:14] 2025-07-28 00:04:39,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,021 | INFO     | monitor loop #334: job 0:6747413371 is in state 'finished'
[2025-07-27 20:05:14] 2025-07-28 00:04:42,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,290 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:05:14] 2025-07-28 00:04:42,296 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3302.690458333333
[2025-07-27 20:05:14] 2025-07-28 00:04:42,311 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6747413371/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,311 | INFO     | extracted standard info from prmon json
[2025-07-27 20:05:14] 2025-07-28 00:04:42,312 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:05:14] 2025-07-28 00:04:42,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:05:14] 2025-07-28 00:04:42,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:05:14] 2025-07-28 00:04:42,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:05:14] 2025-07-28 00:04:42,314 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:05:14] 2025-07-28 00:04:42,314 | INFO     | sum of square deviations: 89127252.5
[2025-07-27 20:05:14] 2025-07-28 00:04:42,314 | INFO     | sum of deviations: -873961823.0000001
[2025-07-27 20:05:14] 2025-07-28 00:04:42,314 | INFO     | mean x: 1753658906.5
[2025-07-27 20:05:14] 2025-07-28 00:04:42,314 | INFO     | mean y: 2552004.3333333335
[2025-07-27 20:05:14] 2025-07-28 00:04:42,314 | INFO     | -- intersect: 17198537428.03891
[2025-07-27 20:05:14] 2025-07-28 00:04:42,314 | INFO     | intersect: 17198537428.03891
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | chi2: 0.0024516920806527264
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | -- intersect: 17198537428.03891
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | current memory leak: -9.81 B/s (using 66 data points, chi2=0.00)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | could have reported an average CPU frequency of 3300 MHz (6 samples)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | ..............................
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | . Timing measurements:
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | . get job = 0 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,315 | INFO     | . initial setup = 2 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,316 | INFO     | . payload setup = 8 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,316 | INFO     | . stage-in = 0 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,316 | INFO     | . payload execution = 4458 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,316 | INFO     | . stage-out = 0 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,316 | INFO     | . log creation = 0 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,316 | INFO     | ..............................
[2025-07-27 20:05:14] 2025-07-28 00:04:42,399 | INFO     | 
[2025-07-27 20:05:14] 2025-07-28 00:04:42,399 | INFO     | job summary report
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | --------------------------------------------------
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | PanDA job id: 6747413371
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | task id: 45743349
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | errors: (none)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | pilot state: finished 
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | transexitcode: 0
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | exeerrorcode: 0
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | exeerrordiag: 
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | exitcode: 0
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | exitmsg: OK
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | cpuconsumptiontime: 33063 s
[2025-07-27 20:05:14] 2025-07-28 00:04:42,400 | INFO     | nevents: 400
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | neventsw: 0
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | pid: 472096
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | pgrp: 472096
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | corecount: 8
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | event service: False
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | sizes: {0: 2397424, 5: 2397686, 11: 2397742, 4467: 2423738, 4468: 2423737, 4469: 2432791, 4472: 2432975, 4478: 2433169}
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | --------------------------------------------------
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | 
[2025-07-27 20:05:14] 2025-07-28 00:04:42,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 20:05:14] 2025-07-28 00:04:42,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | job 6747413371 has completed (purged errors)
[2025-07-27 20:05:14] 2025-07-28 00:04:42,427 | INFO     | overall cleanup function is called
[2025-07-27 20:05:14] 2025-07-28 00:04:43,436 | INFO     | --- collectZombieJob: --- 10, [472096]
[2025-07-27 20:05:14] 2025-07-28 00:04:43,437 | INFO     | zombie collector waiting for pid 472096
[2025-07-27 20:05:14] 2025-07-28 00:04:43,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:05:14] 2025-07-28 00:04:43,437 | INFO     | collected zombie processes
[2025-07-27 20:05:14] 2025-07-28 00:04:43,437 | INFO     | will attempt to kill all subprocesses of pid=472096
[2025-07-27 20:05:14] 2025-07-28 00:04:43,753 | INFO     | process IDs to be killed: [472096] (in reverse order)
[2025-07-27 20:05:14] 2025-07-28 00:04:43,846 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:05:14] 2025-07-28 00:04:43,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:05:14] 2025-07-28 00:04:43,856 | INFO     | did not find any defunct processes belonging to 472096
[2025-07-27 20:05:14] 2025-07-28 00:04:43,863 | INFO     | did not find any defunct processes belonging to 472096
[2025-07-27 20:05:14] 2025-07-28 00:04:43,864 | INFO     | ready for new job
[2025-07-27 20:05:14] 2025-07-28 00:04:43,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:05:14] 2025-07-28 00:04:43,865 | INFO     | ***************************************
[2025-07-27 20:05:14] 2025-07-28 00:04:43,865 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:05:14] 2025-07-28 00:04:43,865 | INFO     | ***************************************
[2025-07-27 20:05:14] 2025-07-28 00:04:43,865 | INFO     | 
[2025-07-27 20:05:14] 2025-07-28 00:04:43,869 | INFO     | architecture information:
[2025-07-27 20:05:14] 2025-07-28 00:04:43,869 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:05:14] 2025-07-28 00:04:43,883 | INFO     | cat /etc/os-release:
[2025-07-27 20:05:14] NAME="CentOS Linux"
[2025-07-27 20:05:14] VERSION="7 (Core)"
[2025-07-27 20:05:14] ID="centos"
[2025-07-27 20:05:14] ID_LIKE="rhel fedora"
[2025-07-27 20:05:14] VERSION_ID="7"
[2025-07-27 20:05:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:05:14] ANSI_COLOR="0;31"
[2025-07-27 20:05:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:05:14] HOME_URL="https://www.centos.org/"
[2025-07-27 20:05:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:05:14] 
[2025-07-27 20:05:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:05:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:05:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:05:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:05:14] 
[2025-07-27 20:05:14] 2025-07-28 00:04:43,883 | INFO     | ***************************************
[2025-07-27 20:05:14] 2025-07-28 00:04:44,386 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 20:05:14] 2025-07-28 00:04:44,406 | INFO     | sufficient remaining disk space (124873867264 B)
[2025-07-27 20:05:14] 2025-07-28 00:04:44,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:05:14] 2025-07-28 00:04:44,406 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:05:14] 2025-07-28 00:04:44,406 | INFO     | update_server=False
[2025-07-27 20:05:14] 2025-07-28 00:04:44,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:05:14] 2025-07-28 00:04:44,418 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-07-27 20:05:14] 2025-07-28 00:04:44,524 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:05:14] 2025-07-28 00:04:44,524 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:05:14] 2025-07-28 00:04:44,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:05:14] 2025-07-28 00:04:44,524 | INFO     | will abort loop
[2025-07-27 20:05:14] 2025-07-28 00:04:44,953 | INFO     | all job control threads have been joined
[2025-07-27 20:05:14] 2025-07-28 00:04:45,151 | INFO     | all data control threads have been joined
[2025-07-27 20:05:14] 2025-07-28 00:04:45,411 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:45,413 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:45,519 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:45,530 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:45,630 | INFO     | [job] validate thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:45,699 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:05:14] 2025-07-28 00:04:45,710 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:45,754 | INFO     | all payload control threads have been joined
[2025-07-27 20:05:14] 2025-07-28 00:04:45,820 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:45,959 | INFO     | [job] control thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:46,131 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:46,157 | INFO     | [data] control thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:46,273 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:46,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:05:14] 2025-07-28 00:04:46,760 | INFO     | [payload] control thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:47,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:05:14] 2025-07-28 00:04:47,704 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:48,413 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:50,382 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:54,813 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:05:14] 2025-07-28 00:04:55,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:05:14] 2025-07-28 00:04:57,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386148824896)>', '<ExcThread(monitor, started 140385351358208)>']
[2025-07-27 20:05:14] 2025-07-28 00:05:02,232 | INFO     | all workflow threads have been joined
[2025-07-27 20:05:14] 2025-07-28 00:05:02,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:05:14] 2025-07-28 00:05:02,232 | INFO     | traces error code: 0
[2025-07-27 20:05:14] 2025-07-28 00:05:02,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:05:14] 2025-07-28 00:05:13,963 | INFO     | PID=463947 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 20:05:14] 2025-07-28 00:05:13,964 | INFO     | .. there are 14 such processes running
[2025-07-27 20:05:14] 2025-07-28 00:05:13,964 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:05:14] 2025-07-28 00:05:13,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:05:14] 2025-07-28 00:05:13,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:05:14] 2025-07-28 00:05:13,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:05:14] 2025-07-28 00:05:13,964 | INFO     | [monitor] control thread has ended
[2025-07-27 20:05:14] 2025-07-28 00:05:14,036 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:05:14] 2025-07-28 00:05:14,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:05:14] 2025-07-28 00:05:14,042 [wrapper] pilotpid: 463947
[2025-07-27 20:05:14] 2025-07-28 00:05:14,045 [wrapper] Pilot exit status: 0
[2025-07-27 20:05:14] 2025-07-28 00:05:14,061 [wrapper] pandaids: 6747413371
[2025-07-27 20:05:14] 2025-07-28 00:05:14,153 [wrapper] cleanup supervisor_pilot  778970 463948
[2025-07-27 20:05:14] 2025-07-28 00:05:14,160 [wrapper] Test setup, not cleaning
[2025-07-27 20:05:14] 2025-07-28 00:05:14,163 [wrapper] apfmon messages muted
[2025-07-27 20:05:14] 2025-07-28 00:05:14,167 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:05:14] 2025-07-28 00:05:14,173 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:05:14]  *** Error codes and diagnostics ***
[2025-07-27 20:05:14]     "exeErrorCode": 0,
[2025-07-27 20:05:14]     "exeErrorDiag": "",
[2025-07-27 20:05:14]     "pilotErrorCode": 0,
[2025-07-27 20:05:14]     "pilotErrorDiag": "",
[2025-07-27 20:05:14]  *** Listing of results directory ***
[2025-07-27 20:05:14] total 357632
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas    530466 Jul 27 10:11 pilot3.tar.gz
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas      5112 Jul 27 10:35 queuedata.json
[2025-07-27 20:05:14] -rwx------. 1 boincer umatlas     36292 Jul 27 10:36 runpilot2-wrapper.sh
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas       100 Jul 27 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:05:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 18:49 run_atlas
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas       105 Jul 27 18:49 job.xml
[2025-07-27 20:05:14] -rw-r--r--. 2 boincer umatlas 150092985 Jul 27 18:49 EVNT.45743347._002789.pool.root.1
[2025-07-27 20:05:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:49 start_atlas.sh
[2025-07-27 20:05:14] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 18:49 shared
[2025-07-27 20:05:14] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 18:49 input.tar.gz
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas         0 Jul 27 18:49 boinc_lockfile
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 18:49 pandaJob.out
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas    980109 Jul 27 18:49 agis_schedconf.cvmfs.json
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas   1593052 Jul 27 18:49 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:05:14] drwx------. 4 boincer umatlas      4096 Jul 27 18:49 pilot3
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 20:01 init_data.xml
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas 210744075 Jul 27 20:04 HITS.45743349._050145.pool.root.1
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas       529 Jul 27 20:04 boinc_task_state.xml
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas        95 Jul 27 20:04 pilot_heartbeat.json
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas      1025 Jul 27 20:04 memory_monitor_summary.json
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas    304125 Jul 27 20:04 log.45743349._050145.job.log.tgz.1
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas      7758 Jul 27 20:04 heartbeat.json
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 20:05 boinc_mmap_file
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas        27 Jul 27 20:05 wrapper_checkpoint.txt
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas       822 Jul 27 20:05 pilotlog.txt
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas    444091 Jul 27 20:05 log.45743349._050145.job.log.1
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas       357 Jul 27 20:05 output.list
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas       620 Jul 27 20:05 runtime_log
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas    768000 Jul 27 20:05 result.tar.gz
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 20:05 runtime_log.err
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas       651 Jul 27 20:05 qM0KDmgfH07n9Rq4apOajLDm4fhM0noT9bVof3QYDmzg2KDmSgHvxm.diag
[2025-07-27 20:05:14] -rw-r--r--. 1 boincer umatlas     21926 Jul 27 20:05 stderr.txt
[2025-07-27 20:05:14] HITS file was successfully produced:
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas 210744075 Jul 27 20:04 shared/HITS.pool.root.1
[2025-07-27 20:05:14]  *** Contents of shared directory: ***
[2025-07-27 20:05:14] total 353692
[2025-07-27 20:05:14] -rw-r--r--. 2 boincer umatlas 150092985 Jul 27 18:49 ATLAS.root_0
[2025-07-27 20:05:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 18:49 start_atlas.sh
[2025-07-27 20:05:14] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 18:49 input.tar.gz
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas 210744075 Jul 27 20:04 HITS.pool.root.1
[2025-07-27 20:05:14] -rw-------. 1 boincer umatlas    768000 Jul 27 20:05 result.tar.gz
20:05:15 (460346): run_atlas exited; CPU time 33163.143072
20:05:15 (460346): called boinc_finish(0)

</stderr_txt>
]]>

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